Experiment: Sucrose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS24385 and EX31_RS24390 are separated by 223 nucleotides EX31_RS24390 and EX31_RS24395 are separated by 73 nucleotides
EX31_RS24385: EX31_RS24385 - dihydroorotase, at 644,286 to 645,335
_RS24385
EX31_RS24390: EX31_RS24390 - antibiotic biosynthesis monooxygenase, at 645,559 to 645,846
_RS24390
EX31_RS24395: EX31_RS24395 - ribonuclease E, at 645,920 to 649,207
_RS24395
Position (kb) 645
646 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 644.756 kb on - strand, within EX31_RS24385 at 644.776 kb on + strand, within EX31_RS24385 at 644.776 kb on + strand, within EX31_RS24385 at 644.777 kb on - strand, within EX31_RS24385 at 644.948 kb on + strand, within EX31_RS24385 at 644.948 kb on + strand, within EX31_RS24385 at 644.948 kb on + strand, within EX31_RS24385 at 644.948 kb on + strand, within EX31_RS24385 at 644.949 kb on - strand, within EX31_RS24385 at 645.023 kb on - strand, within EX31_RS24385 at 645.098 kb on - strand, within EX31_RS24385 at 645.098 kb on - strand, within EX31_RS24385 at 645.098 kb on - strand, within EX31_RS24385 at 645.098 kb on - strand, within EX31_RS24385 at 645.122 kb on + strand, within EX31_RS24385 at 645.122 kb on + strand, within EX31_RS24385 at 645.147 kb on - strand, within EX31_RS24385 at 645.228 kb on + strand, within EX31_RS24385 at 645.284 kb on + strand at 645.285 kb on - strand at 645.416 kb on - strand at 645.421 kb on + strand at 645.448 kb on + strand at 645.458 kb on - strand at 645.501 kb on + strand at 645.529 kb on - strand at 645.635 kb on + strand, within EX31_RS24390 at 645.636 kb on - strand, within EX31_RS24390 at 645.659 kb on + strand, within EX31_RS24390 at 645.659 kb on + strand, within EX31_RS24390 at 645.659 kb on + strand, within EX31_RS24390 at 645.660 kb on - strand, within EX31_RS24390 at 645.673 kb on + strand, within EX31_RS24390 at 645.674 kb on - strand, within EX31_RS24390 at 645.696 kb on + strand, within EX31_RS24390 at 645.997 kb on + strand at 646.057 kb on - strand at 646.057 kb on - strand at 646.057 kb on - strand at 646.057 kb on - strand at 646.057 kb on - strand at 646.057 kb on - strand at 646.178 kb on - strand at 646.487 kb on + strand, within EX31_RS24395 at 646.556 kb on - strand, within EX31_RS24395 at 646.556 kb on - strand, within EX31_RS24395 at 646.588 kb on - strand, within EX31_RS24395 at 646.774 kb on + strand, within EX31_RS24395 at 646.829 kb on - strand, within EX31_RS24395
Per-strain Table
Position Strand Gene LocusTag Fraction Sucrose (C) remove 644,756 - EX31_RS24385 0.45 +1.1 644,776 + EX31_RS24385 0.47 -1.9 644,776 + EX31_RS24385 0.47 -1.9 644,777 - EX31_RS24385 0.47 -1.7 644,948 + EX31_RS24385 0.63 -0.9 644,948 + EX31_RS24385 0.63 -0.9 644,948 + EX31_RS24385 0.63 +0.1 644,948 + EX31_RS24385 0.63 -2.3 644,949 - EX31_RS24385 0.63 -1.7 645,023 - EX31_RS24385 0.70 +0.1 645,098 - EX31_RS24385 0.77 -2.8 645,098 - EX31_RS24385 0.77 -1.7 645,098 - EX31_RS24385 0.77 -1.2 645,098 - EX31_RS24385 0.77 -0.9 645,122 + EX31_RS24385 0.80 -1.7 645,122 + EX31_RS24385 0.80 -0.9 645,147 - EX31_RS24385 0.82 -1.2 645,228 + EX31_RS24385 0.90 +1.1 645,284 + -1.2 645,285 - -2.2 645,416 - +0.1 645,421 + +1.1 645,448 + -2.0 645,458 - +1.7 645,501 + -0.4 645,529 - -0.2 645,635 + EX31_RS24390 0.26 -1.4 645,636 - EX31_RS24390 0.27 +1.1 645,659 + EX31_RS24390 0.35 -0.1 645,659 + EX31_RS24390 0.35 +1.1 645,659 + EX31_RS24390 0.35 +0.1 645,660 - EX31_RS24390 0.35 -0.4 645,673 + EX31_RS24390 0.40 -0.9 645,674 - EX31_RS24390 0.40 +0.1 645,696 + EX31_RS24390 0.48 -0.9 645,997 + +0.1 646,057 - -1.2 646,057 - -0.9 646,057 - +1.7 646,057 - +1.1 646,057 - -0.4 646,057 - -0.9 646,178 - +0.1 646,487 + EX31_RS24395 0.17 -0.9 646,556 - EX31_RS24395 0.19 -0.7 646,556 - EX31_RS24395 0.19 -0.4 646,588 - EX31_RS24395 0.20 +1.1 646,774 + EX31_RS24395 0.26 +1.1 646,829 - EX31_RS24395 0.28 -1.2
Or see this region's nucleotide sequence