Experiment: Sucrose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS18535 and EX31_RS18540 are separated by 148 nucleotides EX31_RS18540 and EX31_RS18545 are separated by 2 nucleotides
EX31_RS18535: EX31_RS18535 - thioredoxin-disulfide reductase, at 281,926 to 282,894
_RS18535
EX31_RS18540: EX31_RS18540 - cysteine/glutathione ABC transporter permease/ATP-binding protein CydD, at 283,043 to 284,809
_RS18540
EX31_RS18545: EX31_RS18545 - cysteine/glutathione ABC transporter ATP-binding protein/permease CydC, at 284,812 to 286,533
_RS18545
Position (kb) 283
284
285 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 282.129 kb on + strand, within EX31_RS18535 at 282.129 kb on + strand, within EX31_RS18535 at 282.129 kb on + strand, within EX31_RS18535 at 282.129 kb on + strand, within EX31_RS18535 at 282.129 kb on + strand, within EX31_RS18535 at 282.129 kb on + strand, within EX31_RS18535 at 282.129 kb on + strand, within EX31_RS18535 at 282.130 kb on - strand, within EX31_RS18535 at 282.280 kb on + strand, within EX31_RS18535 at 282.280 kb on + strand, within EX31_RS18535 at 282.281 kb on - strand, within EX31_RS18535 at 282.281 kb on - strand, within EX31_RS18535 at 282.282 kb on + strand, within EX31_RS18535 at 282.540 kb on + strand, within EX31_RS18535 at 282.541 kb on - strand, within EX31_RS18535 at 282.652 kb on - strand, within EX31_RS18535 at 282.709 kb on + strand, within EX31_RS18535 at 282.756 kb on + strand, within EX31_RS18535 at 282.795 kb on + strand, within EX31_RS18535 at 282.795 kb on + strand, within EX31_RS18535 at 282.795 kb on + strand, within EX31_RS18535 at 282.795 kb on + strand, within EX31_RS18535 at 282.795 kb on + strand, within EX31_RS18535 at 282.799 kb on + strand at 282.834 kb on + strand at 282.834 kb on + strand at 282.834 kb on + strand at 282.890 kb on + strand at 282.890 kb on + strand at 282.891 kb on - strand at 282.891 kb on - strand at 282.892 kb on + strand at 282.892 kb on + strand at 282.892 kb on + strand at 282.893 kb on - strand at 282.893 kb on - strand at 282.908 kb on + strand at 282.909 kb on - strand at 282.909 kb on - strand at 282.930 kb on + strand at 282.930 kb on + strand at 282.930 kb on + strand at 282.956 kb on + strand at 282.956 kb on + strand at 282.956 kb on + strand at 282.956 kb on + strand at 282.957 kb on - strand at 282.957 kb on - strand at 282.996 kb on + strand at 282.996 kb on + strand at 282.996 kb on + strand at 282.996 kb on + strand at 282.996 kb on + strand at 282.996 kb on + strand at 282.997 kb on - strand at 282.997 kb on - strand at 282.997 kb on - strand at 282.997 kb on - strand at 282.997 kb on - strand at 283.124 kb on - strand at 283.185 kb on + strand at 283.417 kb on + strand, within EX31_RS18540 at 283.842 kb on - strand, within EX31_RS18540 at 284.339 kb on + strand, within EX31_RS18540 at 284.353 kb on + strand, within EX31_RS18540 at 284.429 kb on + strand, within EX31_RS18540 at 284.429 kb on + strand, within EX31_RS18540 at 284.429 kb on + strand, within EX31_RS18540 at 284.430 kb on - strand, within EX31_RS18540 at 284.430 kb on - strand, within EX31_RS18540 at 284.445 kb on + strand, within EX31_RS18540 at 284.454 kb on + strand, within EX31_RS18540 at 284.661 kb on + strand at 284.797 kb on + strand at 284.798 kb on - strand at 284.989 kb on - strand, within EX31_RS18545 at 284.989 kb on - strand, within EX31_RS18545
Per-strain Table
Position Strand Gene LocusTag Fraction Sucrose (C) remove 282,129 + EX31_RS18535 0.21 -0.4 282,129 + EX31_RS18535 0.21 -1.2 282,129 + EX31_RS18535 0.21 +0.6 282,129 + EX31_RS18535 0.21 +0.4 282,129 + EX31_RS18535 0.21 -0.4 282,129 + EX31_RS18535 0.21 +0.6 282,129 + EX31_RS18535 0.21 +0.2 282,130 - EX31_RS18535 0.21 +0.2 282,280 + EX31_RS18535 0.37 -1.4 282,280 + EX31_RS18535 0.37 +0.6 282,281 - EX31_RS18535 0.37 +0.2 282,281 - EX31_RS18535 0.37 +0.4 282,282 + EX31_RS18535 0.37 +0.6 282,540 + EX31_RS18535 0.63 -0.8 282,541 - EX31_RS18535 0.63 +0.2 282,652 - EX31_RS18535 0.75 +0.6 282,709 + EX31_RS18535 0.81 +0.6 282,756 + EX31_RS18535 0.86 +1.2 282,795 + EX31_RS18535 0.90 -0.7 282,795 + EX31_RS18535 0.90 -0.4 282,795 + EX31_RS18535 0.90 -1.9 282,795 + EX31_RS18535 0.90 -2.1 282,795 + EX31_RS18535 0.90 -2.2 282,799 + -1.2 282,834 + -1.2 282,834 + -0.3 282,834 + -2.2 282,890 + -0.4 282,890 + +1.2 282,891 - -0.8 282,891 - +0.2 282,892 + -0.0 282,892 + +0.3 282,892 + -0.2 282,893 - +1.2 282,893 - +0.7 282,908 + -1.6 282,909 - -0.4 282,909 - -0.2 282,930 + -2.4 282,930 + +0.7 282,930 + -0.3 282,956 + +0.9 282,956 + -2.8 282,956 + +1.0 282,956 + +1.7 282,957 - -0.4 282,957 - +0.0 282,996 + -0.4 282,996 + +0.2 282,996 + +0.6 282,996 + +0.3 282,996 + +1.2 282,996 + +1.2 282,997 - -1.2 282,997 - -0.3 282,997 - -0.4 282,997 - -0.2 282,997 - -0.2 283,124 - -1.6 283,185 + -1.2 283,417 + EX31_RS18540 0.21 -1.4 283,842 - EX31_RS18540 0.45 -0.4 284,339 + EX31_RS18540 0.73 +0.2 284,353 + EX31_RS18540 0.74 -0.4 284,429 + EX31_RS18540 0.78 +0.2 284,429 + EX31_RS18540 0.78 -0.4 284,429 + EX31_RS18540 0.78 +2.2 284,430 - EX31_RS18540 0.78 -0.8 284,430 - EX31_RS18540 0.78 -0.4 284,445 + EX31_RS18540 0.79 -0.4 284,454 + EX31_RS18540 0.80 +1.2 284,661 + -0.6 284,797 + +1.4 284,798 - +0.2 284,989 - EX31_RS18545 0.10 -1.2 284,989 - EX31_RS18545 0.10 +0.2
Or see this region's nucleotide sequence