Strain Fitness in Rahnella sp. WP5 around EX31_RS17730

Experiment: Sucrose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C)
98,727	+		EX31_RS17725	0.38	+0.7
98,728	-		EX31_RS17725	0.38	+1.1
98,728	-		EX31_RS17725	0.38	+3.1
98,787	-		EX31_RS17725	0.43	+1.5
98,787	-		EX31_RS17725	0.43	-0.4
98,886	+		EX31_RS17725	0.50	+0.4
98,886	+		EX31_RS17725	0.50	+0.4
98,887	-		EX31_RS17725	0.50	+0.1
98,950	-		EX31_RS17725	0.54	+0.1
98,979	+		EX31_RS17725	0.56	+1.1
98,980	-		EX31_RS17725	0.56	+2.1
99,050	+		EX31_RS17725	0.61	-2.0
99,050	+		EX31_RS17725	0.61	+0.8
99,051	-		EX31_RS17725	0.61	-1.6
99,051	-		EX31_RS17725	0.61	-0.7
99,058	+		EX31_RS17725	0.62	-1.5
99,058	+		EX31_RS17725	0.62	-0.5
99,059	-		EX31_RS17725	0.62	+1.1
99,059	-		EX31_RS17725	0.62	+0.7
99,059	-		EX31_RS17725	0.62	+1.1
99,059	-		EX31_RS17725	0.62	-0.7
99,098	+		EX31_RS17725	0.64	-1.2
99,098	+		EX31_RS17725	0.64	+2.8
99,099	-		EX31_RS17725	0.64	-0.5
99,099	-		EX31_RS17725	0.64	-0.3
99,099	-		EX31_RS17725	0.64	+0.1
99,099	-		EX31_RS17725	0.64	+0.1
99,106	-		EX31_RS17725	0.65	+0.1
99,106	-		EX31_RS17725	0.65	+0.1
99,192	+		EX31_RS17725	0.71	+1.7
99,192	+		EX31_RS17725	0.71	-0.6
99,264	+		EX31_RS17725	0.76	-0.0
99,275	+		EX31_RS17725	0.77	-0.7
99,438	-		EX31_RS17725	0.88	+0.1
99,438	-		EX31_RS17725	0.88	+0.6
99,452	+		EX31_RS17725	0.89	-0.5
99,465	-		EX31_RS17725	0.90	+1.1
99,501	+				-1.5
99,600	+				+0.1
99,601	-				+0.1
99,601	-				-0.8
99,601	-				-1.1
99,601	-				-0.2
99,601	-				+1.5
99,601	-				+0.1
99,602	+				+0.4
99,633	+				+0.3
99,636	+				-0.5
99,637	-				+0.5
99,650	-				+0.7
99,693	+				+1.9
99,693	+				-0.5
99,700	-				-1.2
99,709	-				-0.1
99,738	-				+0.7
99,756	-		EX31_RS17730	0.10	-1.5
99,764	+		EX31_RS17730	0.11	-2.7
99,764	+		EX31_RS17730	0.11	+1.1
99,814	-		EX31_RS17730	0.15	+1.5
99,833	+		EX31_RS17730	0.17	+1.1
99,834	-		EX31_RS17730	0.17	+1.7
99,864	+		EX31_RS17730	0.19	-1.3
99,865	-		EX31_RS17730	0.19	+0.5
99,875	+		EX31_RS17730	0.20	+2.5
99,876	-		EX31_RS17730	0.20	-0.5
99,885	+		EX31_RS17730	0.21	+0.1
99,892	+		EX31_RS17730	0.21	+0.5
99,928	-		EX31_RS17730	0.24	+1.5
99,930	+		EX31_RS17730	0.24	+1.1
99,931	-		EX31_RS17730	0.24	-1.0
99,939	+		EX31_RS17730	0.25	-1.7
99,940	-		EX31_RS17730	0.25	+1.1
99,940	-		EX31_RS17730	0.25	-1.5
100,089	+		EX31_RS17730	0.37	+1.1
100,090	-		EX31_RS17730	0.37	+0.5
100,100	+		EX31_RS17730	0.38	-0.2
100,100	+		EX31_RS17730	0.38	-0.5
100,100	+		EX31_RS17730	0.38	-2.0
100,100	+		EX31_RS17730	0.38	+1.1
100,100	+		EX31_RS17730	0.38	+1.4
100,100	+		EX31_RS17730	0.38	+0.1
100,100	+		EX31_RS17730	0.38	+0.1
100,100	+		EX31_RS17730	0.38	-0.7
100,101	-		EX31_RS17730	0.38	-1.2
100,101	-		EX31_RS17730	0.38	+0.3
100,101	-		EX31_RS17730	0.38	+0.1
100,101	-		EX31_RS17730	0.38	+1.5
100,101	-		EX31_RS17730	0.38	-1.1
100,101	-		EX31_RS17730	0.38	-1.7
100,101	-		EX31_RS17730	0.38	-0.5
100,166	+		EX31_RS17730	0.43	-1.7
100,166	+		EX31_RS17730	0.43	-0.5
100,175	+		EX31_RS17730	0.44	-0.5
100,176	-		EX31_RS17730	0.44	+1.7
100,176	-		EX31_RS17730	0.44	+0.9
100,176	-		EX31_RS17730	0.44	-1.5
100,179	+		EX31_RS17730	0.44	-0.1
100,179	+		EX31_RS17730	0.44	-1.0
100,179	+		EX31_RS17730	0.44	+0.5
100,384	-		EX31_RS17730	0.61	-0.2
100,488	-		EX31_RS17730	0.69	+0.9
100,488	-		EX31_RS17730	0.69	+2.1
100,498	+		EX31_RS17730	0.70	+0.3
100,499	-		EX31_RS17730	0.70	-0.9
100,499	-		EX31_RS17730	0.70	-2.0
100,532	+		EX31_RS17730	0.73	-0.1
100,533	-		EX31_RS17730	0.73	-1.0
100,533	-		EX31_RS17730	0.73	+3.1
100,566	+		EX31_RS17730	0.76	+1.1
100,567	-		EX31_RS17730	0.76	+1.7
100,595	+		EX31_RS17730	0.78	-1.5
100,596	-		EX31_RS17730	0.78	-0.9
100,671	+		EX31_RS17730	0.84	+0.7
100,679	+		EX31_RS17730	0.85	+0.1
100,791	+				+1.1
100,792	-				+1.0
100,822	+				-0.2
100,822	+				+0.8
100,823	-				+1.1
100,823	-				-0.9
100,823	-				+0.7
100,841	+				-0.2
100,842	-				-0.9
100,954	-				+0.4
100,954	-				-1.0
101,056	+				+1.9
101,069	+				+2.5
101,076	-				+0.7
101,152	-				+1.7
101,242	+		EX31_RS17735	0.13	+1.0
101,246	+		EX31_RS17735	0.13	-2.2
101,246	+		EX31_RS17735	0.13	+1.1
101,246	+		EX31_RS17735	0.13	+2.3
101,246	+		EX31_RS17735	0.13	+0.6
101,246	+		EX31_RS17735	0.13	+2.7
101,246	+		EX31_RS17735	0.13	-1.2
101,246	+		EX31_RS17735	0.13	+0.1
101,246	+		EX31_RS17735	0.13	-0.1
101,247	-		EX31_RS17735	0.13	+2.1
101,323	+		EX31_RS17735	0.21	-0.5
101,323	+		EX31_RS17735	0.21	+0.7
101,476	+		EX31_RS17735	0.36	-1.2
101,476	+		EX31_RS17735	0.36	+0.6
101,476	+		EX31_RS17735	0.36	+0.1
101,476	+		EX31_RS17735	0.36	-0.7
101,476	+		EX31_RS17735	0.36	-0.2
101,480	+		EX31_RS17735	0.36	-0.9
101,480	+		EX31_RS17735	0.36	+0.3
101,480	+		EX31_RS17735	0.36	+1.1
101,480	+		EX31_RS17735	0.36	+0.6
101,480	+		EX31_RS17735	0.36	+0.7
101,480	+		EX31_RS17735	0.36	-0.2
101,480	+		EX31_RS17735	0.36	-1.2
101,480	+		EX31_RS17735	0.36	+2.1
101,480	+		EX31_RS17735	0.36	+1.0
101,480	+		EX31_RS17735	0.36	+0.1
101,480	+		EX31_RS17735	0.36	-0.9
101,480	+		EX31_RS17735	0.36	+1.2
101,480	+		EX31_RS17735	0.36	+0.4
101,480	+		EX31_RS17735	0.36	-1.9
101,481	-		EX31_RS17735	0.36	+0.7
101,481	-		EX31_RS17735	0.36	-0.7
101,481	-		EX31_RS17735	0.36	-0.9
101,481	-		EX31_RS17735	0.36	+1.6
101,481	-		EX31_RS17735	0.36	+3.0
101,481	-		EX31_RS17735	0.36	+1.1
101,481	-		EX31_RS17735	0.36	+0.1
101,482	+		EX31_RS17735	0.37	+0.1
101,482	+		EX31_RS17735	0.37	+1.7
101,582	+		EX31_RS17735	0.46	-0.2
101,582	+		EX31_RS17735	0.46	+0.1
101,582	+		EX31_RS17735	0.46	-0.4
101,582	+		EX31_RS17735	0.46	-0.5
101,582	+		EX31_RS17735	0.46	+0.8
101,582	+		EX31_RS17735	0.46	+1.1
101,582	+		EX31_RS17735	0.46	+0.1
101,583	-		EX31_RS17735	0.47	+0.6
101,583	-		EX31_RS17735	0.47	-0.7
101,584	+		EX31_RS17735	0.47	-1.0
101,584	+		EX31_RS17735	0.47	+2.7
101,609	+		EX31_RS17735	0.49	+0.1
101,609	+		EX31_RS17735	0.49	+0.6
101,609	+		EX31_RS17735	0.49	+1.1
101,609	+		EX31_RS17735	0.49	-0.3
101,609	+		EX31_RS17735	0.49	+1.1
101,609	+		EX31_RS17735	0.49	+0.5
101,609	+		EX31_RS17735	0.49	+0.9
101,609	+		EX31_RS17735	0.49	+1.9
101,609	+		EX31_RS17735	0.49	+0.3
101,609	+		EX31_RS17735	0.49	+0.6
101,610	-		EX31_RS17735	0.49	+0.5
101,610	-		EX31_RS17735	0.49	-2.5
101,610	-		EX31_RS17735	0.49	+0.8
101,610	-		EX31_RS17735	0.49	+0.1
101,610	-		EX31_RS17735	0.49	-1.5
101,610	-		EX31_RS17735	0.49	-1.2
101,631	+		EX31_RS17735	0.51	-1.5
101,661	+		EX31_RS17735	0.54	+2.0
101,661	+		EX31_RS17735	0.54	-0.1
101,661	+		EX31_RS17735	0.54	-1.2
101,662	-		EX31_RS17735	0.54	+1.7
101,736	+		EX31_RS17735	0.62	-0.5
101,736	+		EX31_RS17735	0.62	-0.5
101,736	+		EX31_RS17735	0.62	-2.3
101,737	-		EX31_RS17735	0.62	-2.5
101,762	+		EX31_RS17735	0.64	+1.1
101,762	+		EX31_RS17735	0.64	-0.9
101,762	+		EX31_RS17735	0.64	+2.1
101,762	+		EX31_RS17735	0.64	+1.9
101,762	+		EX31_RS17735	0.64	+1.1
101,763	-		EX31_RS17735	0.64	-0.5
101,763	-		EX31_RS17735	0.64	+0.1
101,771	+		EX31_RS17735	0.65	-1.1
101,853	+		EX31_RS17735	0.73	+2.0