Strain Fitness in Rahnella sp. WP5 around EX31_RS17665

Experiment: Sucrose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C)
82,419	+				-0.6
82,452	+				-0.5
82,452	+				-0.2
82,452	+				-1.4
82,452	+				+0.5
82,452	+				-0.9
82,452	+				+1.1
82,453	-				-0.3
82,453	-				+0.5
82,453	-				+0.1
82,453	-				+0.7
82,453	-				+2.1
82,453	-				-2.5
82,453	-				-1.5
82,453	-				+1.1
82,453	-				+1.5
82,453	-				-1.2
82,453	-				+0.5
82,482	+		EX31_RS17660	0.12	+1.1
82,482	+		EX31_RS17660	0.12	+1.5
82,648	+		EX31_RS17660	0.28	-1.9
82,648	+		EX31_RS17660	0.28	-2.0
82,648	+		EX31_RS17660	0.28	+0.1
82,738	+		EX31_RS17660	0.37	+1.5
82,740	+		EX31_RS17660	0.37	+0.8
82,740	+		EX31_RS17660	0.37	+1.1
82,740	+		EX31_RS17660	0.37	+0.1
82,741	-		EX31_RS17660	0.38	+0.4
82,741	-		EX31_RS17660	0.38	+1.5
82,741	-		EX31_RS17660	0.38	-0.1
82,783	+		EX31_RS17660	0.42	+0.1
82,784	-		EX31_RS17660	0.42	+1.1
82,792	+		EX31_RS17660	0.42	+2.7
82,793	-		EX31_RS17660	0.43	+0.1
82,863	+		EX31_RS17660	0.49	-0.3
82,864	-		EX31_RS17660	0.49	-1.2
82,864	-		EX31_RS17660	0.49	+0.4
82,864	-		EX31_RS17660	0.49	+1.4
82,864	-		EX31_RS17660	0.49	-1.2
82,975	-		EX31_RS17660	0.60	+1.4
82,975	-		EX31_RS17660	0.60	+0.1
82,975	-		EX31_RS17660	0.60	+1.1
82,975	-		EX31_RS17660	0.60	+0.1
82,975	-		EX31_RS17660	0.60	+1.7
82,992	+		EX31_RS17660	0.62	-0.5
82,992	+		EX31_RS17660	0.62	+0.9
83,009	-		EX31_RS17660	0.64	+1.1
83,129	+		EX31_RS17660	0.75	+1.7
83,129	+		EX31_RS17660	0.75	-0.9
83,130	-		EX31_RS17660	0.75	+1.5
83,130	-		EX31_RS17660	0.75	+2.1
83,130	-		EX31_RS17660	0.75	+0.9
83,217	-		EX31_RS17660	0.84	-1.4
83,248	-		EX31_RS17660	0.87	+2.7
83,284	+				+0.7
83,375	+				-1.2
83,375	+				+0.1
83,375	+				-0.0
83,375	+				+2.0
83,375	+				-1.9
83,376	-				-1.2
83,376	-				-0.7
83,376	-				+0.1
83,376	-				+1.1
83,376	-				-1.2
83,412	-				+0.5
83,417	+				-0.3
83,417	+				+0.7
83,418	-				+0.1
83,418	-				+0.1
83,495	+				+1.9
83,495	+				+0.1
83,561	+		EX31_RS17665	0.14	-0.5
83,561	+		EX31_RS17665	0.14	-1.5
83,561	+		EX31_RS17665	0.14	+0.4
83,561	+		EX31_RS17665	0.14	-0.1
83,679	+		EX31_RS17665	0.24	-1.5
83,679	+		EX31_RS17665	0.24	+1.1
83,680	-		EX31_RS17665	0.24	+0.9
83,680	-		EX31_RS17665	0.24	-0.3
83,680	-		EX31_RS17665	0.24	-0.5
83,680	-		EX31_RS17665	0.24	+2.4
83,741	+		EX31_RS17665	0.29	+0.6
83,843	+		EX31_RS17665	0.38	-0.6
83,843	+		EX31_RS17665	0.38	-0.9
83,843	+		EX31_RS17665	0.38	+1.7
83,844	-		EX31_RS17665	0.38	+0.5
83,844	-		EX31_RS17665	0.38	+1.1
83,847	+		EX31_RS17665	0.38	-0.3
83,848	-		EX31_RS17665	0.38	+1.1
83,882	-		EX31_RS17665	0.41	-0.9
83,889	+		EX31_RS17665	0.41	+1.2
84,030	+		EX31_RS17665	0.53	+0.9
84,031	-		EX31_RS17665	0.53	-1.5
84,031	-		EX31_RS17665	0.53	-1.2
84,031	-		EX31_RS17665	0.53	+1.1
84,031	-		EX31_RS17665	0.53	+1.5
84,031	-		EX31_RS17665	0.53	-2.0
84,031	-		EX31_RS17665	0.53	-2.2
84,032	+		EX31_RS17665	0.53	-1.2
84,032	+		EX31_RS17665	0.53	+1.1
84,033	-		EX31_RS17665	0.53	+0.5
84,033	-		EX31_RS17665	0.53	-1.2
84,033	-		EX31_RS17665	0.53	+1.8
84,120	+		EX31_RS17665	0.61	-0.3
84,120	+		EX31_RS17665	0.61	+0.1
84,121	-		EX31_RS17665	0.61	+0.4
84,265	+		EX31_RS17665	0.73	+0.1
84,265	+		EX31_RS17665	0.73	+1.3
84,266	-		EX31_RS17665	0.73	+0.5
84,266	-		EX31_RS17665	0.73	-1.8
84,340	-		EX31_RS17665	0.79	+0.1
84,340	-		EX31_RS17665	0.79	-1.2
84,447	+		EX31_RS17665	0.88	+2.1
84,447	+		EX31_RS17665	0.88	-0.3
84,448	-		EX31_RS17665	0.88	-0.5
84,448	-		EX31_RS17665	0.88	-2.6
84,486	-				+0.9
84,486	-				-0.1
84,486	-				+1.1
84,544	+				-0.2
84,570	-				+0.3
84,590	+				+1.1
84,591	-				-0.7
84,591	-				+2.1
84,591	-				+0.3
84,591	-				-0.2
84,591	-				-0.7
84,595	-				-0.5
84,597	+				+1.9
84,598	-				+0.1
84,598	-				-1.2
84,618	+				+3.1
84,619	-				-0.3
84,653	-				-0.1
84,658	-				+1.1
84,678	-				+1.3
84,692	-				-1.5
84,718	+				+0.9
84,719	-				-2.0
84,760	+				-0.3
84,848	+				-1.0
84,856	+				-0.2
84,953	-		EX31_RS17670	0.15	+0.1
84,976	+		EX31_RS17670	0.17	+0.5
84,976	+		EX31_RS17670	0.17	-0.1
84,977	-		EX31_RS17670	0.18	-0.3
85,050	+		EX31_RS17670	0.26	+2.5
85,050	+		EX31_RS17670	0.26	+0.6
85,062	+		EX31_RS17670	0.27	+0.1
85,062	+		EX31_RS17670	0.27	+0.4
85,280	-		EX31_RS17670	0.52	+1.5
85,284	+		EX31_RS17670	0.52	-0.1
85,284	+		EX31_RS17670	0.52	+1.4
85,284	+		EX31_RS17670	0.52	-2.5
85,284	+		EX31_RS17670	0.52	+0.5
85,285	-		EX31_RS17670	0.52	+1.5
85,285	-		EX31_RS17670	0.52	-0.6
85,337	+		EX31_RS17670	0.58	+2.4
85,351	+		EX31_RS17670	0.59	+1.4
85,351	+		EX31_RS17670	0.59	-0.0
85,396	+		EX31_RS17670	0.65	+1.5
85,396	+		EX31_RS17670	0.65	+0.1
85,399	+		EX31_RS17670	0.65	-2.5
85,427	+		EX31_RS17670	0.68	+0.5
85,428	-		EX31_RS17670	0.68	-0.7
85,428	-		EX31_RS17670	0.68	+0.8
85,461	+		EX31_RS17670	0.72	-0.5
85,461	+		EX31_RS17670	0.72	+0.4
85,495	+		EX31_RS17670	0.76	+1.1
85,573	+		EX31_RS17670	0.84	-0.5