Strain Fitness in Rahnella sp. WP5 around EX31_RS15015

Experiment: Sucrose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C)
16,009	-		EX31_RS15010	0.48	-2.5
16,165	+		EX31_RS15010	0.58	-3.2
16,165	+		EX31_RS15010	0.58	-2.4
16,165	+		EX31_RS15010	0.58	-0.9
16,165	+		EX31_RS15010	0.58	-3.2
16,166	-		EX31_RS15010	0.58	-3.7
16,166	-		EX31_RS15010	0.58	-3.7
16,166	-		EX31_RS15010	0.58	-2.3
16,166	-		EX31_RS15010	0.58	-1.5
16,182	+		EX31_RS15010	0.59	-2.1
16,182	+		EX31_RS15010	0.59	-1.7
16,182	+		EX31_RS15010	0.59	-3.8
16,182	+		EX31_RS15010	0.59	-1.4
16,246	+		EX31_RS15010	0.63	-3.1
16,246	+		EX31_RS15010	0.63	-3.1
16,246	+		EX31_RS15010	0.63	-2.6
16,246	+		EX31_RS15010	0.63	-4.4
16,246	+		EX31_RS15010	0.63	-4.2
16,246	+		EX31_RS15010	0.63	-3.6
16,247	-		EX31_RS15010	0.63	-2.4
16,247	-		EX31_RS15010	0.63	-2.2
16,375	+		EX31_RS15010	0.71	-1.8
16,375	+		EX31_RS15010	0.71	-2.1
16,375	+		EX31_RS15010	0.71	-2.1
16,375	+		EX31_RS15010	0.71	-2.6
16,375	+		EX31_RS15010	0.71	-2.5
16,376	-		EX31_RS15010	0.72	-1.8
16,376	-		EX31_RS15010	0.72	-2.7
16,376	-		EX31_RS15010	0.72	-3.4
16,376	-		EX31_RS15010	0.72	-3.2
16,376	-		EX31_RS15010	0.72	-2.7
16,381	+		EX31_RS15010	0.72	-4.8
16,531	+		EX31_RS15010	0.82	-2.8
16,531	+		EX31_RS15010	0.82	-1.4
16,531	+		EX31_RS15010	0.82	-0.6
16,531	+		EX31_RS15010	0.82	-1.9
16,531	+		EX31_RS15010	0.82	+0.1
16,531	+		EX31_RS15010	0.82	-1.6
16,531	+		EX31_RS15010	0.82	-1.8
16,531	+		EX31_RS15010	0.82	-2.7
16,531	+		EX31_RS15010	0.82	+0.6
16,531	+		EX31_RS15010	0.82	-1.3
16,531	+		EX31_RS15010	0.82	-3.3
16,531	+		EX31_RS15010	0.82	-0.7
16,532	-		EX31_RS15010	0.82	-1.6
16,532	-		EX31_RS15010	0.82	-2.1
16,532	-		EX31_RS15010	0.82	-1.4
16,532	-		EX31_RS15010	0.82	-2.5
16,532	-		EX31_RS15010	0.82	-3.0
16,532	-		EX31_RS15010	0.82	-1.8
16,532	-		EX31_RS15010	0.82	-1.2
16,532	-		EX31_RS15010	0.82	-1.8
16,532	-		EX31_RS15010	0.82	-0.9
16,532	-		EX31_RS15010	0.82	-2.9
16,532	-		EX31_RS15010	0.82	-1.4
16,576	+		EX31_RS15010	0.84	-3.5
16,576	+		EX31_RS15010	0.84	+1.6
16,626	+		EX31_RS15010	0.88	-3.6
16,626	+		EX31_RS15010	0.88	-3.2
16,626	+		EX31_RS15010	0.88	-3.8
16,626	+		EX31_RS15010	0.88	-3.5
16,627	-		EX31_RS15010	0.88	-1.4
16,627	-		EX31_RS15010	0.88	-1.9
16,648	-		EX31_RS15010	0.89	-3.1
16,759	+				-0.2
16,858	-				-1.0
16,858	-				-1.8
16,960	-		EX31_RS15015	0.11	-2.9
16,960	-		EX31_RS15015	0.11	-3.5
16,974	+		EX31_RS15015	0.12	+0.0
16,974	+		EX31_RS15015	0.12	-1.0
16,975	-		EX31_RS15015	0.13	-1.8
17,056	+		EX31_RS15015	0.22	-1.5
17,056	+		EX31_RS15015	0.22	+0.9
17,056	+		EX31_RS15015	0.22	+0.2
17,056	+		EX31_RS15015	0.22	+0.4
17,056	+		EX31_RS15015	0.22	-1.5
17,056	+		EX31_RS15015	0.22	+0.4
17,056	+		EX31_RS15015	0.22	+0.6
17,057	-		EX31_RS15015	0.22	-2.3
17,057	-		EX31_RS15015	0.22	-1.9
17,057	-		EX31_RS15015	0.22	-2.4
17,057	-		EX31_RS15015	0.22	-1.4
17,057	-		EX31_RS15015	0.22	-1.2
17,087	+		EX31_RS15015	0.25	-1.2
17,088	-		EX31_RS15015	0.25	-3.9
17,438	+		EX31_RS15015	0.65	-1.5
17,439	-		EX31_RS15015	0.65	-2.7
17,606	-		EX31_RS15015	0.84	+0.1
17,716	+				+0.7
17,716	+				-1.2
17,716	+				+0.5
17,717	-				-2.9
17,737	+				-0.2
17,737	+				-0.6
17,737	+				-0.5
17,737	+				-0.4
17,737	+				+0.6
17,737	+				-0.5
17,738	-				-1.4
17,738	-				-4.8
17,738	-				-3.9
17,738	-				-2.9
17,738	-				-0.4
17,738	-				-2.2
17,738	-				-3.1
17,738	-				-2.5
17,752	+				-0.1
17,791	-				-0.4
17,818	+				-2.8
17,819	-				-4.9
17,852	+				-2.7
17,852	+				-1.4
17,852	+				-1.1
17,852	+				-2.7
17,852	+				-0.4
17,852	+				-0.5
17,852	+				-2.4
17,852	+				-1.5
17,852	+				+0.2
17,852	+				-2.4
17,852	+				-2.3
17,852	+				-2.3
17,852	+				+0.6
17,852	+				-1.4
17,852	+				-4.3
17,852	+				-2.9
17,852	+				-1.3
17,852	+				-1.3
17,852	+				-1.2
17,852	+				-0.2
17,852	+				-3.4
17,852	+				-0.4
17,852	+				-2.5
17,852	+				-0.6
17,852	+				-1.7
17,852	+				-1.3
17,852	+				-1.9
17,852	+				-1.8
17,852	+				-2.6
17,853	-				-2.9
17,853	-				-3.0
17,853	-				-0.7
17,853	-				-1.9
17,853	-				-3.0
17,853	-				-4.4
17,853	-				-2.8
17,853	-				-4.1
17,853	-				-2.1
17,853	-				-3.7
17,853	-				-1.4
17,853	-				-3.4
17,853	-				-3.4
17,853	-				-1.8
17,853	-				-2.8
17,853	-				-2.8
17,853	-				-3.1
17,853	-				-2.2
17,853	-				-3.4
17,853	-				-1.7
17,853	-				-2.2
17,853	-				-3.1
17,853	-				-3.2
17,853	-				-1.1
17,853	-				-3.1
17,853	-				-2.5
17,853	-				-3.4
17,853	-				-3.3
17,853	-				-2.1
17,853	-				-2.1
17,853	-				-3.5
17,853	-				-3.3
17,853	-				+1.6
17,853	-				-1.8
17,853	-				-2.5
17,853	-				-3.2
17,853	-				-1.2
17,853	-				-3.1
17,854	+				-1.8
17,854	+				-0.9
17,854	+				+0.3
17,854	+				-1.6
17,854	+				-2.7
17,854	+				-0.4
17,855	-				-0.9
17,855	-				-1.7
17,855	-				-3.1
17,855	-				-3.5
17,855	-				-3.0
17,855	-				-3.7
17,855	-				-2.9
17,855	-				-3.3
17,899	-				-3.3
17,899	-				-2.8
17,908	+				-3.3
17,908	+				-0.9
17,908	+				-3.5
17,908	+				-3.7
17,908	+				-2.1
17,909	-				-3.5
17,909	-				-2.5
17,909	-				-3.5
17,916	+				-1.5
17,937	+				-3.5
17,941	+				-2.9
17,941	+				-4.9
17,941	+				-3.5
17,941	+				-3.9
17,941	+				-2.9
17,941	+				-2.2
17,941	+				-3.5
17,942	-				-2.5
17,942	-				-1.8
17,942	-				-3.6
17,997	+				-2.8
17,997	+				-3.7
17,998	-				+1.6
18,031	+				-1.9
18,031	+				-3.6
18,031	+				-4.4
18,032	-				-1.2
18,060	-				-1.2
18,060	-				-2.1
18,060	-				-2.8
18,060	-				-4.6
18,124	+		EX31_RS15020	0.13	-4.2
18,124	+		EX31_RS15020	0.13	-2.4
18,124	+		EX31_RS15020	0.13	-0.2
18,124	+		EX31_RS15020	0.13	-1.7
18,125	-		EX31_RS15020	0.13	-1.9
18,171	+		EX31_RS15020	0.16	-3.2
18,171	+		EX31_RS15020	0.16	-4.9
18,193	-		EX31_RS15020	0.18	-2.9
18,193	-		EX31_RS15020	0.18	-2.2
18,205	+		EX31_RS15020	0.18	-3.1
18,205	+		EX31_RS15020	0.18	-4.4
18,205	+		EX31_RS15020	0.18	-2.7
18,205	+		EX31_RS15020	0.18	-3.5
18,206	-		EX31_RS15020	0.19	-3.9
18,273	-		EX31_RS15020	0.23	-4.2
18,275	+		EX31_RS15020	0.23	-1.4
18,275	+		EX31_RS15020	0.23	-3.4
18,275	+		EX31_RS15020	0.23	-2.9
18,275	+		EX31_RS15020	0.23	-4.2
18,276	-		EX31_RS15020	0.23	-3.0
18,424	+		EX31_RS15020	0.33	-1.4
18,424	+		EX31_RS15020	0.33	-1.1
18,424	+		EX31_RS15020	0.33	-2.5
18,424	+		EX31_RS15020	0.33	-2.5
18,425	-		EX31_RS15020	0.33	-2.9
18,425	-		EX31_RS15020	0.33	-3.2
18,443	+		EX31_RS15020	0.35	-3.4
18,443	+		EX31_RS15020	0.35	-1.9
18,443	+		EX31_RS15020	0.35	-4.4
18,601	-		EX31_RS15020	0.45	-1.9
18,601	-		EX31_RS15020	0.45	+0.1
18,676	+		EX31_RS15020	0.50	+0.1
18,677	-		EX31_RS15020	0.50	-3.8
18,677	-		EX31_RS15020	0.50	-2.9