Strain Fitness in Rahnella sp. WP5 around EX31_RS12660

Experiment: Sucrose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C)
199,942	-				+1.0
199,942	-				+0.0
199,989	-				+0.1
200,178	+		EX31_RS12650	0.51	-2.3
200,179	-		EX31_RS12650	0.51	-0.8
200,189	-		EX31_RS12650	0.53	+0.4
200,189	-		EX31_RS12650	0.53	+0.5
200,271	+		EX31_RS12650	0.75	+0.1
200,271	+		EX31_RS12650	0.75	+0.6
200,272	-		EX31_RS12650	0.75	+0.0
200,272	-		EX31_RS12650	0.75	+0.0
200,317	-		EX31_RS12650	0.87	+0.7
200,317	-		EX31_RS12650	0.87	+0.2
200,317	-		EX31_RS12650	0.87	-0.9
200,350	+				+0.5
200,351	-				+0.2
200,351	-				-0.5
200,351	-				+0.6
200,403	+				+0.5
200,403	+				-1.8
200,403	+				-0.3
200,403	+				-0.9
200,403	+				-0.6
200,404	-				-0.5
200,404	-				-0.0
200,404	-				-0.1
200,404	-				+0.1
200,404	-				-0.6
200,404	-				-0.8
200,404	-				-1.3
200,426	+				-0.1
200,426	+				+0.3
200,427	-				-1.1
200,427	-				+1.3
200,435	+				+0.3
200,443	-				-0.0
200,443	-				+1.3
200,447	+				+0.1
200,448	-				-0.0
200,448	-				-2.1
200,448	-				+0.1
200,449	+				-2.9
200,449	+				-0.0
200,450	-				+1.1
200,450	-				-0.5
200,450	-				-0.0
200,450	-				-0.8
200,450	-				-2.9
200,450	-				-0.8
200,462	+				+0.7
200,462	+				-2.5
200,462	+				-0.5
200,462	+				+0.0
200,462	+				+0.0
200,462	+				+0.1
200,462	+				-0.8
200,462	+				+1.5
200,462	+				-2.5
200,462	+				+0.3
200,462	+				-1.1
200,462	+				-1.8
200,463	-				+1.8
200,463	-				-0.8
200,463	-				+1.3
200,463	-				+0.3
200,463	-				+0.1
200,463	-				+0.3
200,466	+				-0.0
200,466	+				-0.2
200,466	+				+0.6
200,466	+				-0.1
200,466	+				+0.5
200,467	-				+0.0
200,467	-				+0.1
200,467	-				-0.5
200,467	-				+1.1
200,467	-				+0.6
200,467	-				-0.6
200,467	-				+0.6
200,467	-				+0.7
200,467	-				-0.3
200,467	-				-0.7
200,467	-				-0.2
200,467	-				-0.2
200,467	-				+0.4
200,472	+				-0.3
200,472	+				+0.5
200,472	+				-0.4
200,472	+				-0.1
200,472	+				+0.2
200,473	-				+0.2
200,473	-				-0.3
200,508	+				+0.1
200,508	+				-0.1
200,508	+				+0.1
200,509	-				-2.1
200,561	+		EX31_RS12655	0.17	-0.5
200,561	+		EX31_RS12655	0.17	+0.7
200,561	+		EX31_RS12655	0.17	+1.1
200,561	+		EX31_RS12655	0.17	+0.9
200,561	+		EX31_RS12655	0.17	-0.2
200,561	+		EX31_RS12655	0.17	-1.5
200,561	+		EX31_RS12655	0.17	+0.8
200,562	-		EX31_RS12655	0.17	+0.8
200,562	-		EX31_RS12655	0.17	+0.6
200,562	-		EX31_RS12655	0.17	-1.8
200,562	-		EX31_RS12655	0.17	-1.8
200,564	+		EX31_RS12655	0.17	+0.5
200,564	+		EX31_RS12655	0.17	+1.5
200,602	+		EX31_RS12655	0.27	+0.3
200,603	-		EX31_RS12655	0.28	+0.5
200,645	-		EX31_RS12655	0.39	-0.3
200,645	-		EX31_RS12655	0.39	+1.3
200,670	+		EX31_RS12655	0.45	+0.3
200,670	+		EX31_RS12655	0.45	-1.1
200,671	-		EX31_RS12655	0.45	+0.6
200,711	+		EX31_RS12655	0.56	-0.7
200,711	+		EX31_RS12655	0.56	+0.3
200,711	+		EX31_RS12655	0.56	-0.3
200,712	-		EX31_RS12655	0.56	-1.2
200,712	-		EX31_RS12655	0.56	+1.6
200,712	-		EX31_RS12655	0.56	-1.6
200,717	+		EX31_RS12655	0.57	-0.3
200,717	+		EX31_RS12655	0.57	+0.0
200,717	+		EX31_RS12655	0.57	+2.5
200,718	-		EX31_RS12655	0.58	-0.3
200,718	-		EX31_RS12655	0.58	+1.8
200,718	-		EX31_RS12655	0.58	-0.1
200,718	-		EX31_RS12655	0.58	+0.8
200,718	-		EX31_RS12655	0.58	+0.3
200,811	+		EX31_RS12655	0.82	+1.3
200,811	+		EX31_RS12655	0.82	+0.5
200,866	+				-0.5
200,882	-				+1.6
200,882	-				-0.8
200,897	+				+0.5
200,898	-				+0.8
200,898	-				-1.1
201,002	+		EX31_RS12660	0.18	+0.5
201,002	+		EX31_RS12660	0.18	-1.5
201,002	+		EX31_RS12660	0.18	+0.3
201,002	+		EX31_RS12660	0.18	+0.2
201,002	+		EX31_RS12660	0.18	+1.5
201,003	-		EX31_RS12660	0.18	+0.9
201,003	-		EX31_RS12660	0.18	+0.9
201,003	-		EX31_RS12660	0.18	-1.8
201,010	+		EX31_RS12660	0.19	+0.0
201,010	+		EX31_RS12660	0.19	+1.2
201,011	-		EX31_RS12660	0.19	+0.6
201,180	+		EX31_RS12660	0.44	+2.5
201,181	-		EX31_RS12660	0.44	+0.5
201,181	-		EX31_RS12660	0.44	+0.6
201,204	-		EX31_RS12660	0.48	-1.8
201,232	+		EX31_RS12660	0.52	+0.8
201,232	+		EX31_RS12660	0.52	+0.5
201,244	-		EX31_RS12660	0.53	+0.8
201,264	+		EX31_RS12660	0.56	+3.8
201,265	-		EX31_RS12660	0.57	-1.1
201,265	-		EX31_RS12660	0.57	+1.3
201,302	-		EX31_RS12660	0.62	+0.9
201,302	-		EX31_RS12660	0.62	+2.5
201,489	+		EX31_RS12660	0.89	+1.4
201,646	-				-0.3
201,697	+				+0.3
201,698	-				+1.2
201,750	-				-0.3
201,763	+				+0.5
201,763	+				+1.5
201,769	+				+0.6
201,770	-				+1.1
201,782	+				-0.7
201,782	+				-0.0
201,782	+				-1.7
201,782	+				-0.8
201,783	-				+0.0
201,783	-				-0.3
201,783	-				+0.2
201,783	-				-0.3
201,783	-				-0.5
201,783	-				-1.8
201,783	-				-0.8
201,786	+				+0.3
201,786	+				+0.1
201,786	+				-1.1
201,786	+				+1.1
201,786	+				-0.5
201,787	-				-0.2
201,787	-				-0.5
201,787	-				-0.1
201,788	+				+0.4
201,788	+				-0.1
201,789	-				-2.2
201,811	-				-1.7
201,841	+				-0.1
201,841	+				-0.2
201,857	-				-0.8
201,946	-				-1.3
201,946	-				+0.6
201,950	-				+0.3
201,997	-				-0.6
202,011	-				+1.5
202,011	-				+0.4
202,124	+		EX31_RS12665	0.23	-1.3
202,205	-		EX31_RS12665	0.34	-0.5
202,290	-		EX31_RS12665	0.45	+1.6
202,403	-		EX31_RS12665	0.59	+0.1
202,403	-		EX31_RS12665	0.59	-0.4
202,403	-		EX31_RS12665	0.59	+1.1
202,403	-		EX31_RS12665	0.59	-1.2
202,403	-		EX31_RS12665	0.59	-1.0
202,428	-		EX31_RS12665	0.62	-0.1
202,428	-		EX31_RS12665	0.62	+0.2
202,539	+		EX31_RS12665	0.77	+0.7
202,539	+		EX31_RS12665	0.77	-0.4
202,539	+		EX31_RS12665	0.77	+2.1
202,539	+		EX31_RS12665	0.77	-0.5
202,540	-		EX31_RS12665	0.77	+0.6
202,540	-		EX31_RS12665	0.77	+1.3
202,540	-		EX31_RS12665	0.77	-2.9