Experiment: Sucrose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS09350 and EX31_RS09355 overlap by 8 nucleotides EX31_RS09355 and EX31_RS09360 overlap by 11 nucleotides EX31_RS09360 and EX31_RS09365 are separated by 5 nucleotides
EX31_RS09350: EX31_RS09350 - ATP-binding cassette domain-containing protein, at 73,862 to 74,539
_RS09350
EX31_RS09355: EX31_RS09355 - ABC transporter ATP-binding protein, at 74,532 to 75,416
_RS09355
EX31_RS09360: EX31_RS09360 - ABC transporter permease, at 75,406 to 76,284
_RS09360
EX31_RS09365: EX31_RS09365 - ABC transporter permease, at 76,290 to 77,342
_RS09365
Position (kb) 75
76
77 Strain fitness (log2 ratio) -2
-1
0
1
2 at 74.461 kb on + strand, within EX31_RS09350 at 74.461 kb on + strand, within EX31_RS09350 at 74.461 kb on + strand, within EX31_RS09350 at 74.462 kb on - strand, within EX31_RS09350 at 74.462 kb on - strand, within EX31_RS09350 at 74.462 kb on - strand, within EX31_RS09350 at 74.636 kb on + strand, within EX31_RS09355 at 74.637 kb on - strand, within EX31_RS09355 at 74.642 kb on + strand, within EX31_RS09355 at 74.642 kb on + strand, within EX31_RS09355 at 74.642 kb on + strand, within EX31_RS09355 at 74.643 kb on - strand, within EX31_RS09355 at 74.643 kb on - strand, within EX31_RS09355 at 74.643 kb on - strand, within EX31_RS09355 at 74.643 kb on - strand, within EX31_RS09355 at 74.643 kb on - strand, within EX31_RS09355 at 74.643 kb on - strand, within EX31_RS09355 at 74.645 kb on - strand, within EX31_RS09355 at 74.704 kb on + strand, within EX31_RS09355 at 74.704 kb on + strand, within EX31_RS09355 at 74.704 kb on + strand, within EX31_RS09355 at 74.704 kb on + strand, within EX31_RS09355 at 74.704 kb on + strand, within EX31_RS09355 at 74.705 kb on - strand, within EX31_RS09355 at 74.705 kb on - strand, within EX31_RS09355 at 74.705 kb on - strand, within EX31_RS09355 at 74.705 kb on - strand, within EX31_RS09355 at 74.774 kb on + strand, within EX31_RS09355 at 75.346 kb on + strand at 75.347 kb on - strand at 75.347 kb on - strand at 75.357 kb on - strand at 75.357 kb on - strand at 75.395 kb on + strand at 75.396 kb on - strand at 75.935 kb on + strand, within EX31_RS09360 at 75.936 kb on - strand, within EX31_RS09360 at 75.980 kb on - strand, within EX31_RS09360 at 76.023 kb on - strand, within EX31_RS09360 at 76.163 kb on - strand, within EX31_RS09360 at 76.284 kb on + strand at 76.315 kb on + strand at 76.315 kb on + strand at 76.315 kb on + strand at 76.315 kb on + strand at 76.315 kb on + strand at 76.315 kb on + strand at 76.316 kb on - strand at 76.319 kb on + strand at 76.319 kb on + strand at 76.319 kb on + strand at 76.319 kb on + strand at 76.320 kb on - strand at 76.320 kb on - strand at 76.320 kb on - strand at 76.320 kb on - strand at 76.373 kb on + strand at 76.449 kb on + strand, within EX31_RS09365 at 76.551 kb on + strand, within EX31_RS09365 at 76.552 kb on - strand, within EX31_RS09365 at 76.552 kb on - strand, within EX31_RS09365 at 76.558 kb on - strand, within EX31_RS09365 at 76.595 kb on - strand, within EX31_RS09365 at 76.595 kb on - strand, within EX31_RS09365 at 76.686 kb on + strand, within EX31_RS09365 at 76.686 kb on + strand, within EX31_RS09365 at 76.686 kb on + strand, within EX31_RS09365 at 76.687 kb on - strand, within EX31_RS09365 at 76.774 kb on + strand, within EX31_RS09365 at 76.774 kb on + strand, within EX31_RS09365 at 76.775 kb on - strand, within EX31_RS09365 at 76.775 kb on - strand, within EX31_RS09365 at 76.775 kb on - strand, within EX31_RS09365 at 76.775 kb on - strand, within EX31_RS09365 at 76.775 kb on - strand, within EX31_RS09365 at 76.775 kb on - strand, within EX31_RS09365 at 76.778 kb on + strand, within EX31_RS09365 at 76.778 kb on + strand, within EX31_RS09365 at 76.778 kb on + strand, within EX31_RS09365 at 76.778 kb on + strand, within EX31_RS09365 at 76.778 kb on + strand, within EX31_RS09365 at 76.778 kb on + strand, within EX31_RS09365 at 76.778 kb on + strand, within EX31_RS09365 at 76.779 kb on - strand, within EX31_RS09365 at 76.779 kb on - strand, within EX31_RS09365 at 76.779 kb on - strand, within EX31_RS09365 at 76.779 kb on - strand, within EX31_RS09365 at 76.779 kb on - strand, within EX31_RS09365 at 76.779 kb on - strand, within EX31_RS09365 at 76.779 kb on - strand, within EX31_RS09365 at 76.779 kb on - strand, within EX31_RS09365 at 76.779 kb on - strand, within EX31_RS09365 at 76.780 kb on + strand, within EX31_RS09365 at 76.780 kb on + strand, within EX31_RS09365 at 76.780 kb on + strand, within EX31_RS09365 at 76.781 kb on - strand, within EX31_RS09365 at 76.781 kb on - strand, within EX31_RS09365 at 76.781 kb on - strand, within EX31_RS09365 at 77.061 kb on - strand, within EX31_RS09365 at 77.131 kb on - strand, within EX31_RS09365 at 77.131 kb on - strand, within EX31_RS09365 at 77.152 kb on + strand, within EX31_RS09365 at 77.223 kb on - strand, within EX31_RS09365 at 77.223 kb on - strand, within EX31_RS09365
Per-strain Table
Position Strand Gene LocusTag Fraction Sucrose (C) remove 74,461 + EX31_RS09350 0.88 -1.7 74,461 + EX31_RS09350 0.88 +1.2 74,461 + EX31_RS09350 0.88 +1.5 74,462 - EX31_RS09350 0.88 +0.1 74,462 - EX31_RS09350 0.88 -0.4 74,462 - EX31_RS09350 0.88 +1.1 74,636 + EX31_RS09355 0.12 +1.7 74,637 - EX31_RS09355 0.12 -0.9 74,642 + EX31_RS09355 0.12 -0.9 74,642 + EX31_RS09355 0.12 +1.1 74,642 + EX31_RS09355 0.12 -1.3 74,643 - EX31_RS09355 0.13 +0.6 74,643 - EX31_RS09355 0.13 +1.5 74,643 - EX31_RS09355 0.13 +0.7 74,643 - EX31_RS09355 0.13 -1.4 74,643 - EX31_RS09355 0.13 -0.2 74,643 - EX31_RS09355 0.13 -1.3 74,645 - EX31_RS09355 0.13 +2.1 74,704 + EX31_RS09355 0.19 -1.8 74,704 + EX31_RS09355 0.19 +1.1 74,704 + EX31_RS09355 0.19 -0.4 74,704 + EX31_RS09355 0.19 +0.9 74,704 + EX31_RS09355 0.19 -1.4 74,705 - EX31_RS09355 0.20 +0.7 74,705 - EX31_RS09355 0.20 +0.3 74,705 - EX31_RS09355 0.20 +1.6 74,705 - EX31_RS09355 0.20 +1.1 74,774 + EX31_RS09355 0.27 +1.1 75,346 + +1.6 75,347 - +0.9 75,347 - +0.6 75,357 - +0.9 75,357 - +0.1 75,395 + +0.4 75,396 - -2.2 75,935 + EX31_RS09360 0.60 -1.7 75,936 - EX31_RS09360 0.60 -1.2 75,980 - EX31_RS09360 0.65 -1.2 76,023 - EX31_RS09360 0.70 +1.6 76,163 - EX31_RS09360 0.86 +1.1 76,284 + -0.9 76,315 + -1.0 76,315 + +1.1 76,315 + +0.1 76,315 + +2.7 76,315 + -0.1 76,315 + +1.7 76,316 - +2.5 76,319 + +1.6 76,319 + +0.6 76,319 + +0.6 76,319 + -0.2 76,320 - +0.6 76,320 - +0.8 76,320 - +1.1 76,320 - +0.6 76,373 + +0.1 76,449 + EX31_RS09365 0.15 +0.3 76,551 + EX31_RS09365 0.25 +0.6 76,552 - EX31_RS09365 0.25 +0.6 76,552 - EX31_RS09365 0.25 -0.7 76,558 - EX31_RS09365 0.25 +1.1 76,595 - EX31_RS09365 0.29 +1.7 76,595 - EX31_RS09365 0.29 -0.3 76,686 + EX31_RS09365 0.38 -0.7 76,686 + EX31_RS09365 0.38 -1.0 76,686 + EX31_RS09365 0.38 +0.7 76,687 - EX31_RS09365 0.38 +0.9 76,774 + EX31_RS09365 0.46 -0.9 76,774 + EX31_RS09365 0.46 -1.4 76,775 - EX31_RS09365 0.46 -0.0 76,775 - EX31_RS09365 0.46 +0.3 76,775 - EX31_RS09365 0.46 -1.7 76,775 - EX31_RS09365 0.46 +0.9 76,775 - EX31_RS09365 0.46 -0.4 76,775 - EX31_RS09365 0.46 -0.7 76,778 + EX31_RS09365 0.46 +0.6 76,778 + EX31_RS09365 0.46 -2.0 76,778 + EX31_RS09365 0.46 -2.0 76,778 + EX31_RS09365 0.46 +0.6 76,778 + EX31_RS09365 0.46 +0.1 76,778 + EX31_RS09365 0.46 +0.1 76,778 + EX31_RS09365 0.46 +0.1 76,779 - EX31_RS09365 0.46 +0.0 76,779 - EX31_RS09365 0.46 -0.9 76,779 - EX31_RS09365 0.46 +1.1 76,779 - EX31_RS09365 0.46 -2.2 76,779 - EX31_RS09365 0.46 +0.7 76,779 - EX31_RS09365 0.46 +1.8 76,779 - EX31_RS09365 0.46 -0.9 76,779 - EX31_RS09365 0.46 -1.4 76,779 - EX31_RS09365 0.46 -0.9 76,780 + EX31_RS09365 0.47 +1.1 76,780 + EX31_RS09365 0.47 -0.1 76,780 + EX31_RS09365 0.47 +2.7 76,781 - EX31_RS09365 0.47 +1.1 76,781 - EX31_RS09365 0.47 +0.1 76,781 - EX31_RS09365 0.47 +1.1 77,061 - EX31_RS09365 0.73 +0.5 77,131 - EX31_RS09365 0.80 -0.4 77,131 - EX31_RS09365 0.80 -1.2 77,152 + EX31_RS09365 0.82 +1.1 77,223 - EX31_RS09365 0.89 -1.7 77,223 - EX31_RS09365 0.89 +1.1
Or see this region's nucleotide sequence