Strain Fitness in Rahnella sp. WP5 around EX31_RS07750

Experiment: Sucrose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C)
30,903	+		EX31_RS07740	0.81	+0.5
30,941	-		EX31_RS07740	0.84	+0.1
30,949	+		EX31_RS07740	0.85	-1.3
30,949	+		EX31_RS07740	0.85	+0.3
30,949	+		EX31_RS07740	0.85	+2.2
30,949	+		EX31_RS07740	0.85	-1.1
30,982	+		EX31_RS07740	0.87	-1.3
31,033	+				+1.1
31,033	+				+0.3
31,033	+				-0.6
31,033	+				+0.7
31,034	-				-0.1
31,034	-				-0.8
31,052	+				+0.4
31,052	+				+0.2
31,052	+				+0.2
31,113	+				-0.1
31,211	+				+0.1
31,211	+				+1.6
31,212	-				-1.1
31,212	-				-0.1
31,212	-				+0.6
31,218	+				-0.8
31,219	-				-0.8
31,341	+		EX31_RS07745	0.24	+0.2
31,341	+		EX31_RS07745	0.24	+0.5
31,341	+		EX31_RS07745	0.24	+0.0
31,342	-		EX31_RS07745	0.24	-0.1
31,342	-		EX31_RS07745	0.24	+0.6
31,356	+		EX31_RS07745	0.27	-1.0
31,699	+				+2.3
31,706	+				-0.8
31,711	+				-1.1
31,712	-				-0.3
31,732	+				+0.2
31,733	-				-0.7
31,751	+				+0.5
31,803	+				-0.7
31,803	+				+1.5
31,803	+				-0.1
31,803	+				+2.5
31,804	-				+2.1
31,804	-				-1.3
31,804	-				-0.6
31,804	-				+0.5
31,807	+				-1.5
31,808	-				-0.6
31,829	-				-0.2
31,856	+				-0.0
31,857	-				+0.2
31,857	-				+0.5
31,857	-				-1.1
31,869	+				-1.5
31,869	+				-1.1
31,869	+				-0.2
31,869	+				-0.8
31,870	-				-0.6
31,870	-				-0.1
31,870	-				+0.7
31,891	+				-0.1
31,892	-				+0.5
31,892	-				+0.6
31,925	-				+0.8
31,925	-				-0.9
31,925	-				-1.3
31,925	-				-0.6
31,938	+				-2.7
31,939	-				-2.0
31,943	+				+1.5
31,943	+				-2.1
31,943	+				-0.5
31,943	+				+0.1
31,943	+				+0.3
31,944	-				-0.3
31,944	-				-0.6
31,944	-				-0.9
31,944	-				+0.8
32,051	-		EX31_RS07750	0.10	+1.5
32,122	+		EX31_RS07750	0.15	-1.7
32,123	-		EX31_RS07750	0.15	-0.1
32,123	-		EX31_RS07750	0.15	-1.3
32,163	-		EX31_RS07750	0.17	-1.5
32,177	-		EX31_RS07750	0.18	-0.1
32,177	-		EX31_RS07750	0.18	-1.7
32,177	-		EX31_RS07750	0.18	-2.0
32,277	-		EX31_RS07750	0.25	-1.8
32,306	+		EX31_RS07750	0.26	+0.2
32,307	-		EX31_RS07750	0.27	+0.3
32,345	+		EX31_RS07750	0.29	-0.8
32,346	-		EX31_RS07750	0.29	+0.3
32,397	+		EX31_RS07750	0.32	-2.4
32,398	-		EX31_RS07750	0.32	-1.8
32,398	-		EX31_RS07750	0.32	-0.8
32,483	+		EX31_RS07750	0.38	-1.1
32,483	+		EX31_RS07750	0.38	-2.4
32,483	+		EX31_RS07750	0.38	-1.3
32,484	-		EX31_RS07750	0.38	-0.8
32,484	-		EX31_RS07750	0.38	+2.5
32,484	-		EX31_RS07750	0.38	-1.1
32,484	-		EX31_RS07750	0.38	+0.9
32,584	-		EX31_RS07750	0.44	-0.8
32,608	+		EX31_RS07750	0.46	+0.6
32,609	-		EX31_RS07750	0.46	-1.3
32,609	-		EX31_RS07750	0.46	+0.1
32,609	-		EX31_RS07750	0.46	-1.1
32,642	-		EX31_RS07750	0.48	-0.8
32,642	-		EX31_RS07750	0.48	+0.9
32,686	+		EX31_RS07750	0.51	-0.1
32,686	+		EX31_RS07750	0.51	+0.5
32,686	+		EX31_RS07750	0.51	+1.1
32,686	+		EX31_RS07750	0.51	-1.5
32,686	+		EX31_RS07750	0.51	-0.1
32,687	-		EX31_RS07750	0.51	-1.7
32,687	-		EX31_RS07750	0.51	-0.9
32,687	-		EX31_RS07750	0.51	-1.2
32,687	-		EX31_RS07750	0.51	-0.1
32,687	-		EX31_RS07750	0.51	+0.5
32,703	-		EX31_RS07750	0.52	-1.8
32,703	-		EX31_RS07750	0.52	-1.1
32,732	+		EX31_RS07750	0.54	+1.5
32,733	-		EX31_RS07750	0.54	-0.3
32,733	-		EX31_RS07750	0.54	-0.3
32,733	-		EX31_RS07750	0.54	-2.4
32,733	-		EX31_RS07750	0.54	-0.1
32,738	+		EX31_RS07750	0.54	-0.3
32,738	+		EX31_RS07750	0.54	-0.1
32,738	+		EX31_RS07750	0.54	+1.5
32,738	+		EX31_RS07750	0.54	+1.5
32,739	-		EX31_RS07750	0.54	-0.4
32,739	-		EX31_RS07750	0.54	-1.1
32,739	-		EX31_RS07750	0.54	-1.5
32,739	-		EX31_RS07750	0.54	-1.7
32,739	-		EX31_RS07750	0.54	+0.4
32,741	-		EX31_RS07750	0.54	-0.7
32,745	+		EX31_RS07750	0.54	-1.8
32,745	+		EX31_RS07750	0.54	-0.1
32,746	-		EX31_RS07750	0.54	+1.1
32,773	+		EX31_RS07750	0.56	-1.1
32,783	-		EX31_RS07750	0.57	-0.9
32,783	-		EX31_RS07750	0.57	-2.1
32,783	-		EX31_RS07750	0.57	-1.2
32,801	+		EX31_RS07750	0.58	+1.9
32,801	+		EX31_RS07750	0.58	-2.2
32,801	+		EX31_RS07750	0.58	+1.5
32,802	-		EX31_RS07750	0.58	-2.7
32,803	+		EX31_RS07750	0.58	+0.5
32,899	+		EX31_RS07750	0.64	+1.3
32,902	+		EX31_RS07750	0.64	-1.0
32,902	+		EX31_RS07750	0.64	-0.3
32,903	-		EX31_RS07750	0.64	-0.5
32,903	-		EX31_RS07750	0.64	+0.5
32,903	-		EX31_RS07750	0.64	-1.5
32,903	-		EX31_RS07750	0.64	-1.5
32,903	-		EX31_RS07750	0.64	+0.7
32,903	-		EX31_RS07750	0.64	-1.0
32,903	-		EX31_RS07750	0.64	-2.8
32,903	-		EX31_RS07750	0.64	-0.8
32,903	-		EX31_RS07750	0.64	-1.8
32,903	-		EX31_RS07750	0.64	+2.2
32,903	-		EX31_RS07750	0.64	-0.3
32,923	+		EX31_RS07750	0.66	-0.3
33,010	+		EX31_RS07750	0.71	+0.5
33,028	-		EX31_RS07750	0.72	-1.3
33,106	+		EX31_RS07750	0.77	-0.8
33,107	-		EX31_RS07750	0.77	+0.5
33,167	+		EX31_RS07750	0.81	-0.2
33,167	+		EX31_RS07750	0.81	-2.8
33,167	+		EX31_RS07750	0.81	+0.1
33,167	+		EX31_RS07750	0.81	+0.5
33,168	-		EX31_RS07750	0.81	-0.5
33,168	-		EX31_RS07750	0.81	-0.1
33,168	-		EX31_RS07750	0.81	-0.2
33,168	-		EX31_RS07750	0.81	-0.5
33,168	-		EX31_RS07750	0.81	-0.7
33,168	-		EX31_RS07750	0.81	-2.7
33,168	-		EX31_RS07750	0.81	+3.1
33,168	-		EX31_RS07750	0.81	-2.6
33,168	-		EX31_RS07750	0.81	-1.7
33,168	-		EX31_RS07750	0.81	+1.5
33,168	-		EX31_RS07750	0.81	-0.5
33,236	+		EX31_RS07750	0.86	+0.1
33,236	+		EX31_RS07750	0.86	+1.0
33,237	-		EX31_RS07750	0.86	-1.5
33,257	+		EX31_RS07750	0.87	-0.5
33,258	-		EX31_RS07750	0.87	-1.5
33,258	-		EX31_RS07750	0.87	+0.3
33,264	+		EX31_RS07750	0.87	-0.5
33,267	+		EX31_RS07750	0.88	+0.1
33,319	-				+0.2
33,398	+				+1.5
33,405	+				-0.8
33,406	-				-1.1
33,447	+				+0.5
33,447	+				-0.5
33,447	+				-0.7
33,448	-				-1.3
33,448	-				-0.5
33,448	-				-0.9
33,448	-				+1.8
33,489	-				-3.5
33,501	+				-0.8
33,501	+				-0.7
33,514	+				+0.2
33,514	+				+1.0
33,514	+				-1.4
33,514	+				-0.1
33,514	+				+0.8
33,514	+				+2.5
33,514	+				-0.8
33,514	+				+1.5
33,514	+				+0.2
33,514	+				+0.3
33,515	-				-0.2
33,515	-				+1.2
33,515	-				-0.1
33,515	-				-1.7
33,515	-				+0.4
33,515	-				-1.5
33,515	-				-0.4
33,515	-				-0.5
33,515	-				+1.1
33,515	-				-0.3
33,515	-				-1.0
33,526	+				+0.6
33,527	-				-3.1
33,527	-				+0.5
33,527	-				+0.3
33,533	+				-1.5
33,533	+				-0.9
33,548	+				-1.3
33,578	-				+2.1
33,596	+		EX31_RS07755	0.11	-0.7
33,596	+		EX31_RS07755	0.11	-0.2
33,596	+		EX31_RS07755	0.11	-0.0
33,596	+		EX31_RS07755	0.11	-0.1
33,596	+		EX31_RS07755	0.11	-0.4
33,597	-		EX31_RS07755	0.12	+0.7
33,597	-		EX31_RS07755	0.12	-0.4
33,665	-		EX31_RS07755	0.28	-0.8
33,667	+		EX31_RS07755	0.28	-2.6
33,667	+		EX31_RS07755	0.28	-0.3
33,667	+		EX31_RS07755	0.28	-0.1
33,667	+		EX31_RS07755	0.28	+0.7
33,668	-		EX31_RS07755	0.28	+0.8
33,668	-		EX31_RS07755	0.28	+1.4
33,673	+		EX31_RS07755	0.29	-1.3
33,674	-		EX31_RS07755	0.30	+0.7
33,710	-		EX31_RS07755	0.38	-0.1
33,771	+		EX31_RS07755	0.52	+0.1
33,772	-		EX31_RS07755	0.52	-1.8
33,772	-		EX31_RS07755	0.52	+0.3
33,772	-		EX31_RS07755	0.52	-1.7
33,809	-		EX31_RS07755	0.61	+1.1
33,817	+		EX31_RS07755	0.63	+0.7
33,817	+		EX31_RS07755	0.63	-2.2
33,817	+		EX31_RS07755	0.63	-2.0
33,817	+		EX31_RS07755	0.63	+0.2
33,817	+		EX31_RS07755	0.63	+0.2
33,817	+		EX31_RS07755	0.63	-0.5
33,818	-		EX31_RS07755	0.63	-0.7
33,818	-		EX31_RS07755	0.63	-0.5
33,818	-		EX31_RS07755	0.63	+2.1
33,818	-		EX31_RS07755	0.63	+1.5
33,818	-		EX31_RS07755	0.63	+0.1
33,822	+		EX31_RS07755	0.64	-0.1
33,823	-		EX31_RS07755	0.64	-0.3
33,890	-		EX31_RS07755	0.80	-0.6
33,890	-		EX31_RS07755	0.80	+1.4
33,892	+		EX31_RS07755	0.80	-0.1
33,893	-		EX31_RS07755	0.81	-0.5
33,917	-		EX31_RS07755	0.86	-0.3
33,928	+		EX31_RS07755	0.89	-0.6
33,929	-		EX31_RS07755	0.89	+0.5
33,980	+				-0.4
34,001	+				+1.5
34,001	+				+0.1
34,001	+				+1.1
34,171	-		EX31_RS07760	0.35	-0.1
34,171	-		EX31_RS07760	0.35	-1.5
34,171	-		EX31_RS07760	0.35	+0.7
34,243	+		EX31_RS07760	0.48	-0.3
34,243	+		EX31_RS07760	0.48	-0.8
34,244	-		EX31_RS07760	0.48	-1.0
34,244	-		EX31_RS07760	0.48	+0.5
34,244	-		EX31_RS07760	0.48	+0.9
34,244	-		EX31_RS07760	0.48	-0.9
34,244	-		EX31_RS07760	0.48	-0.1
34,244	-		EX31_RS07760	0.48	-0.4
34,278	+		EX31_RS07760	0.54	-1.7
34,279	-		EX31_RS07760	0.54	+1.5
34,279	-		EX31_RS07760	0.54	-1.7
34,279	-		EX31_RS07760	0.54	-0.2
34,352	+		EX31_RS07760	0.67	-1.8
34,352	+		EX31_RS07760	0.67	-0.3
34,352	+		EX31_RS07760	0.67	-0.8
34,353	-		EX31_RS07760	0.67	+0.0
34,353	-		EX31_RS07760	0.67	-0.5
34,353	-		EX31_RS07760	0.67	-0.1
34,353	-		EX31_RS07760	0.67	-0.3
34,353	-		EX31_RS07760	0.67	-1.3
34,353	-		EX31_RS07760	0.67	+1.5
34,353	-		EX31_RS07760	0.67	-0.8
34,353	-		EX31_RS07760	0.67	-1.8
34,355	+		EX31_RS07760	0.68	+0.5
34,355	+		EX31_RS07760	0.68	+0.9
34,356	-		EX31_RS07760	0.68	-1.7
34,356	-		EX31_RS07760	0.68	+2.0
34,356	-		EX31_RS07760	0.68	-0.3
34,356	-		EX31_RS07760	0.68	+0.3
34,362	+		EX31_RS07760	0.69	+2.5
34,362	+		EX31_RS07760	0.69	-0.3
34,363	-		EX31_RS07760	0.69	+0.8
34,364	+		EX31_RS07760	0.69	+0.2
34,365	-		EX31_RS07760	0.69	-0.2
34,426	+		EX31_RS07760	0.80	+0.3
34,427	-		EX31_RS07760	0.80	+1.5
34,438	+		EX31_RS07760	0.82	-0.7
34,438	+		EX31_RS07760	0.82	-1.2
34,438	+		EX31_RS07760	0.82	-1.8
34,439	-		EX31_RS07760	0.82	-0.6
34,439	-		EX31_RS07760	0.82	+1.1
34,439	-		EX31_RS07760	0.82	-0.5
34,439	-		EX31_RS07760	0.82	+1.0