Experiment: Sucrose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS03345 and EX31_RS03350 are separated by 22 nucleotides EX31_RS03350 and EX31_RS03355 are separated by 9 nucleotides EX31_RS03355 and EX31_RS03360 are separated by 47 nucleotides EX31_RS03360 and EX31_RS03365 are separated by 258 nucleotides
EX31_RS03345: EX31_RS03345 - sorbitol-6-phosphate dehydrogenase, at 157,316 to 158,095
_RS03345
EX31_RS03350: EX31_RS03350 - PTS glucitol/sorbitol transporter subunit IIA, at 158,118 to 158,480
_RS03350
EX31_RS03355: EX31_RS03355 - PTS glucitol/sorbitol transporter subunit IIB, at 158,490 to 159,479
_RS03355
EX31_RS03360: EX31_RS03360 - PTS sorbitol transporter subunit IIC, at 159,527 to 160,075
_RS03360
EX31_RS03365: EX31_RS03365 - multicopper oxidase CueO, at 160,334 to 161,938
_RS03365
Position (kb) 158
159
160 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 157.508 kb on + strand, within EX31_RS03345 at 157.508 kb on + strand, within EX31_RS03345 at 157.508 kb on + strand, within EX31_RS03345 at 157.509 kb on - strand, within EX31_RS03345 at 157.509 kb on - strand, within EX31_RS03345 at 157.535 kb on + strand, within EX31_RS03345 at 157.565 kb on - strand, within EX31_RS03345 at 157.565 kb on - strand, within EX31_RS03345 at 157.565 kb on - strand, within EX31_RS03345 at 157.572 kb on + strand, within EX31_RS03345 at 157.645 kb on + strand, within EX31_RS03345 at 157.645 kb on + strand, within EX31_RS03345 at 157.645 kb on + strand, within EX31_RS03345 at 157.645 kb on + strand, within EX31_RS03345 at 157.645 kb on + strand, within EX31_RS03345 at 157.645 kb on + strand, within EX31_RS03345 at 157.645 kb on + strand, within EX31_RS03345 at 157.646 kb on - strand, within EX31_RS03345 at 157.646 kb on - strand, within EX31_RS03345 at 157.646 kb on - strand, within EX31_RS03345 at 157.702 kb on + strand, within EX31_RS03345 at 157.750 kb on - strand, within EX31_RS03345 at 157.837 kb on - strand, within EX31_RS03345 at 157.837 kb on - strand, within EX31_RS03345 at 157.892 kb on + strand, within EX31_RS03345 at 157.892 kb on + strand, within EX31_RS03345 at 157.892 kb on + strand, within EX31_RS03345 at 157.893 kb on - strand, within EX31_RS03345 at 157.893 kb on - strand, within EX31_RS03345 at 157.893 kb on - strand, within EX31_RS03345 at 158.095 kb on + strand at 158.096 kb on - strand at 158.096 kb on - strand at 158.115 kb on + strand at 158.120 kb on - strand at 158.153 kb on + strand at 158.175 kb on + strand, within EX31_RS03350 at 158.175 kb on + strand, within EX31_RS03350 at 158.175 kb on + strand, within EX31_RS03350 at 158.175 kb on + strand, within EX31_RS03350 at 158.176 kb on - strand, within EX31_RS03350 at 158.176 kb on - strand, within EX31_RS03350 at 158.176 kb on - strand, within EX31_RS03350 at 158.176 kb on - strand, within EX31_RS03350 at 158.176 kb on - strand, within EX31_RS03350 at 158.181 kb on + strand, within EX31_RS03350 at 158.181 kb on + strand, within EX31_RS03350 at 158.181 kb on + strand, within EX31_RS03350 at 158.181 kb on + strand, within EX31_RS03350 at 158.181 kb on + strand, within EX31_RS03350 at 158.182 kb on - strand, within EX31_RS03350 at 158.182 kb on - strand, within EX31_RS03350 at 158.182 kb on - strand, within EX31_RS03350 at 158.182 kb on - strand, within EX31_RS03350 at 158.182 kb on - strand, within EX31_RS03350 at 158.182 kb on - strand, within EX31_RS03350 at 158.231 kb on + strand, within EX31_RS03350 at 158.231 kb on + strand, within EX31_RS03350 at 158.232 kb on - strand, within EX31_RS03350 at 158.309 kb on + strand, within EX31_RS03350 at 158.311 kb on + strand, within EX31_RS03350 at 158.311 kb on + strand, within EX31_RS03350 at 158.311 kb on + strand, within EX31_RS03350 at 158.365 kb on + strand, within EX31_RS03350 at 158.365 kb on + strand, within EX31_RS03350 at 158.366 kb on - strand, within EX31_RS03350 at 158.453 kb on + strand at 158.457 kb on - strand at 158.457 kb on - strand at 158.457 kb on - strand at 158.468 kb on - strand at 158.468 kb on - strand at 158.468 kb on - strand at 158.497 kb on + strand at 158.529 kb on + strand at 158.529 kb on + strand at 158.529 kb on + strand at 158.529 kb on + strand at 158.529 kb on + strand at 158.530 kb on - strand at 158.877 kb on - strand, within EX31_RS03355 at 158.877 kb on - strand, within EX31_RS03355 at 158.909 kb on + strand, within EX31_RS03355 at 158.910 kb on - strand, within EX31_RS03355 at 158.910 kb on - strand, within EX31_RS03355 at 158.910 kb on - strand, within EX31_RS03355 at 159.038 kb on + strand, within EX31_RS03355 at 159.049 kb on + strand, within EX31_RS03355 at 159.094 kb on - strand, within EX31_RS03355 at 159.154 kb on + strand, within EX31_RS03355 at 159.154 kb on + strand, within EX31_RS03355 at 159.154 kb on + strand, within EX31_RS03355 at 159.154 kb on + strand, within EX31_RS03355 at 159.154 kb on + strand, within EX31_RS03355 at 159.155 kb on - strand, within EX31_RS03355 at 159.155 kb on - strand, within EX31_RS03355 at 159.155 kb on - strand, within EX31_RS03355 at 159.155 kb on - strand, within EX31_RS03355 at 159.155 kb on - strand, within EX31_RS03355 at 159.155 kb on - strand, within EX31_RS03355 at 159.171 kb on - strand, within EX31_RS03355 at 159.171 kb on - strand, within EX31_RS03355 at 159.210 kb on - strand, within EX31_RS03355 at 159.212 kb on + strand, within EX31_RS03355 at 159.213 kb on - strand, within EX31_RS03355 at 159.213 kb on - strand, within EX31_RS03355 at 159.239 kb on - strand, within EX31_RS03355 at 159.315 kb on - strand, within EX31_RS03355 at 159.324 kb on + strand, within EX31_RS03355 at 159.390 kb on - strand at 159.390 kb on - strand at 159.391 kb on + strand at 159.391 kb on + strand at 159.391 kb on + strand at 159.391 kb on + strand at 159.391 kb on + strand at 159.391 kb on + strand at 159.391 kb on + strand at 159.391 kb on + strand at 159.391 kb on + strand at 159.391 kb on + strand at 159.391 kb on + strand at 159.391 kb on + strand at 159.391 kb on + strand at 159.392 kb on - strand at 159.392 kb on - strand at 159.392 kb on - strand at 159.392 kb on - strand at 159.392 kb on - strand at 159.392 kb on - strand at 159.392 kb on - strand at 159.392 kb on - strand at 159.392 kb on - strand at 159.392 kb on - strand at 159.392 kb on - strand at 159.392 kb on - strand at 159.392 kb on - strand at 159.392 kb on - strand at 159.392 kb on - strand at 159.392 kb on - strand at 159.392 kb on - strand at 159.392 kb on - strand at 159.392 kb on - strand at 159.392 kb on - strand at 159.392 kb on - strand at 159.392 kb on - strand at 159.392 kb on - strand at 159.392 kb on - strand at 159.392 kb on - strand at 159.392 kb on - strand at 159.392 kb on - strand at 159.392 kb on - strand at 159.392 kb on - strand at 159.471 kb on - strand at 159.512 kb on + strand at 159.512 kb on + strand at 159.513 kb on - strand at 159.513 kb on - strand at 159.513 kb on - strand at 159.529 kb on - strand at 159.617 kb on - strand, within EX31_RS03360 at 159.617 kb on - strand, within EX31_RS03360 at 159.640 kb on - strand, within EX31_RS03360 at 159.640 kb on - strand, within EX31_RS03360 at 159.725 kb on - strand, within EX31_RS03360 at 159.727 kb on + strand, within EX31_RS03360 at 159.727 kb on + strand, within EX31_RS03360 at 159.727 kb on + strand, within EX31_RS03360 at 159.727 kb on + strand, within EX31_RS03360 at 159.727 kb on + strand, within EX31_RS03360 at 159.728 kb on - strand, within EX31_RS03360 at 159.728 kb on - strand, within EX31_RS03360 at 159.728 kb on - strand, within EX31_RS03360 at 159.728 kb on - strand, within EX31_RS03360 at 159.762 kb on + strand, within EX31_RS03360 at 159.762 kb on + strand, within EX31_RS03360 at 159.763 kb on - strand, within EX31_RS03360 at 159.777 kb on + strand, within EX31_RS03360 at 159.780 kb on + strand, within EX31_RS03360 at 159.780 kb on + strand, within EX31_RS03360 at 159.781 kb on - strand, within EX31_RS03360 at 159.781 kb on - strand, within EX31_RS03360 at 159.792 kb on + strand, within EX31_RS03360 at 159.806 kb on - strand, within EX31_RS03360 at 159.806 kb on - strand, within EX31_RS03360 at 159.806 kb on - strand, within EX31_RS03360 at 159.873 kb on + strand, within EX31_RS03360 at 159.874 kb on - strand, within EX31_RS03360 at 159.970 kb on + strand, within EX31_RS03360 at 159.971 kb on - strand, within EX31_RS03360 at 159.971 kb on - strand, within EX31_RS03360 at 159.974 kb on + strand, within EX31_RS03360 at 159.974 kb on + strand, within EX31_RS03360 at 159.974 kb on + strand, within EX31_RS03360 at 159.974 kb on + strand, within EX31_RS03360 at 159.974 kb on + strand, within EX31_RS03360 at 159.974 kb on + strand, within EX31_RS03360 at 159.974 kb on + strand, within EX31_RS03360 at 159.975 kb on - strand, within EX31_RS03360 at 159.975 kb on - strand, within EX31_RS03360 at 159.975 kb on - strand, within EX31_RS03360 at 159.975 kb on - strand, within EX31_RS03360 at 159.975 kb on - strand, within EX31_RS03360 at 159.975 kb on - strand, within EX31_RS03360 at 160.061 kb on + strand at 160.061 kb on + strand at 160.061 kb on + strand at 160.062 kb on - strand at 160.062 kb on - strand at 160.064 kb on + strand at 160.064 kb on + strand at 160.065 kb on - strand at 160.065 kb on - strand at 160.065 kb on - strand at 160.065 kb on - strand at 160.065 kb on - strand at 160.065 kb on - strand at 160.065 kb on - strand at 160.094 kb on + strand at 160.094 kb on + strand at 160.094 kb on + strand at 160.094 kb on + strand at 160.095 kb on - strand at 160.095 kb on - strand at 160.308 kb on + strand at 160.325 kb on + strand at 160.349 kb on - strand at 160.349 kb on - strand at 160.404 kb on + strand at 160.404 kb on + strand at 160.404 kb on + strand at 160.404 kb on + strand at 160.404 kb on + strand at 160.404 kb on + strand at 160.404 kb on + strand at 160.404 kb on + strand at 160.404 kb on + strand at 160.404 kb on + strand at 160.404 kb on + strand at 160.404 kb on + strand at 160.404 kb on + strand at 160.404 kb on + strand at 160.404 kb on + strand at 160.404 kb on + strand at 160.404 kb on + strand at 160.405 kb on - strand at 160.405 kb on - strand at 160.405 kb on - strand at 160.405 kb on - strand at 160.405 kb on - strand at 160.405 kb on - strand at 160.405 kb on - strand at 160.405 kb on - strand at 160.405 kb on - strand at 160.405 kb on - strand at 160.405 kb on - strand at 160.405 kb on - strand at 160.405 kb on - strand at 160.405 kb on - strand at 160.405 kb on - strand at 160.405 kb on - strand at 160.405 kb on - strand at 160.405 kb on - strand at 160.405 kb on - strand at 160.405 kb on - strand at 160.405 kb on - strand at 160.405 kb on - strand at 160.405 kb on - strand at 160.405 kb on - strand at 160.405 kb on - strand at 160.417 kb on + strand at 160.432 kb on + strand at 160.433 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Sucrose (C) remove 157,508 + EX31_RS03345 0.25 +0.7 157,508 + EX31_RS03345 0.25 -2.3 157,508 + EX31_RS03345 0.25 +1.3 157,509 - EX31_RS03345 0.25 +1.5 157,509 - EX31_RS03345 0.25 +1.6 157,535 + EX31_RS03345 0.28 +0.4 157,565 - EX31_RS03345 0.32 -0.4 157,565 - EX31_RS03345 0.32 -0.4 157,565 - EX31_RS03345 0.32 -1.0 157,572 + EX31_RS03345 0.33 +0.9 157,645 + EX31_RS03345 0.42 +0.3 157,645 + EX31_RS03345 0.42 -0.7 157,645 + EX31_RS03345 0.42 -1.8 157,645 + EX31_RS03345 0.42 +1.0 157,645 + EX31_RS03345 0.42 -0.2 157,645 + EX31_RS03345 0.42 +0.3 157,645 + EX31_RS03345 0.42 +0.6 157,646 - EX31_RS03345 0.42 +0.3 157,646 - EX31_RS03345 0.42 -0.3 157,646 - EX31_RS03345 0.42 -1.7 157,702 + EX31_RS03345 0.49 +0.5 157,750 - EX31_RS03345 0.56 +1.3 157,837 - EX31_RS03345 0.67 -0.4 157,837 - EX31_RS03345 0.67 +0.4 157,892 + EX31_RS03345 0.74 +0.1 157,892 + EX31_RS03345 0.74 +0.3 157,892 + EX31_RS03345 0.74 +0.3 157,893 - EX31_RS03345 0.74 -0.8 157,893 - EX31_RS03345 0.74 -0.6 157,893 - EX31_RS03345 0.74 -1.3 158,095 + -1.0 158,096 - +0.8 158,096 - -0.5 158,115 + -1.5 158,120 - +0.3 158,153 + +0.8 158,175 + EX31_RS03350 0.16 +0.2 158,175 + EX31_RS03350 0.16 -0.7 158,175 + EX31_RS03350 0.16 +0.7 158,175 + EX31_RS03350 0.16 +0.7 158,176 - EX31_RS03350 0.16 -0.1 158,176 - EX31_RS03350 0.16 -0.4 158,176 - EX31_RS03350 0.16 -0.1 158,176 - EX31_RS03350 0.16 -1.5 158,176 - EX31_RS03350 0.16 -0.4 158,181 + EX31_RS03350 0.17 +0.7 158,181 + EX31_RS03350 0.17 -0.0 158,181 + EX31_RS03350 0.17 +1.1 158,181 + EX31_RS03350 0.17 -3.3 158,181 + EX31_RS03350 0.17 -0.0 158,182 - EX31_RS03350 0.18 +1.3 158,182 - EX31_RS03350 0.18 -0.9 158,182 - EX31_RS03350 0.18 +0.5 158,182 - EX31_RS03350 0.18 +0.1 158,182 - EX31_RS03350 0.18 -1.3 158,182 - EX31_RS03350 0.18 +0.9 158,231 + EX31_RS03350 0.31 -0.7 158,231 + EX31_RS03350 0.31 +0.0 158,232 - EX31_RS03350 0.31 +0.0 158,309 + EX31_RS03350 0.53 +0.3 158,311 + EX31_RS03350 0.53 +2.3 158,311 + EX31_RS03350 0.53 +0.0 158,311 + EX31_RS03350 0.53 +0.6 158,365 + EX31_RS03350 0.68 +0.5 158,365 + EX31_RS03350 0.68 -1.5 158,366 - EX31_RS03350 0.68 +0.4 158,453 + -2.0 158,457 - -0.4 158,457 - +1.0 158,457 - -1.0 158,468 - +1.3 158,468 - -1.0 158,468 - +0.3 158,497 + +0.5 158,529 + -0.3 158,529 + +1.5 158,529 + +1.1 158,529 + +0.7 158,529 + -0.5 158,530 - +3.3 158,877 - EX31_RS03355 0.39 -2.0 158,877 - EX31_RS03355 0.39 +0.5 158,909 + EX31_RS03355 0.42 -0.5 158,910 - EX31_RS03355 0.42 -0.7 158,910 - EX31_RS03355 0.42 +0.6 158,910 - EX31_RS03355 0.42 -2.8 159,038 + EX31_RS03355 0.55 +0.1 159,049 + EX31_RS03355 0.56 -0.4 159,094 - EX31_RS03355 0.61 -0.8 159,154 + EX31_RS03355 0.67 -1.0 159,154 + EX31_RS03355 0.67 -3.3 159,154 + EX31_RS03355 0.67 -1.5 159,154 + EX31_RS03355 0.67 -0.3 159,154 + EX31_RS03355 0.67 +1.5 159,155 - EX31_RS03355 0.67 +0.3 159,155 - EX31_RS03355 0.67 -0.3 159,155 - EX31_RS03355 0.67 +0.3 159,155 - EX31_RS03355 0.67 -0.4 159,155 - EX31_RS03355 0.67 +0.1 159,155 - EX31_RS03355 0.67 -0.1 159,171 - EX31_RS03355 0.69 +0.3 159,171 - EX31_RS03355 0.69 -0.8 159,210 - EX31_RS03355 0.73 +0.0 159,212 + EX31_RS03355 0.73 +0.5 159,213 - EX31_RS03355 0.73 -0.5 159,213 - EX31_RS03355 0.73 +2.6 159,239 - EX31_RS03355 0.76 -0.6 159,315 - EX31_RS03355 0.83 -2.3 159,324 + EX31_RS03355 0.84 +0.6 159,390 - -0.8 159,390 - +1.3 159,391 + -0.3 159,391 + -0.4 159,391 + +0.2 159,391 + +1.3 159,391 + -1.3 159,391 + -0.3 159,391 + -0.5 159,391 + +1.3 159,391 + +0.3 159,391 + +0.0 159,391 + -1.0 159,391 + +1.1 159,391 + +0.7 159,392 - -1.3 159,392 - -1.5 159,392 - -0.7 159,392 - +0.5 159,392 - +0.2 159,392 - -0.5 159,392 - -0.7 159,392 - +1.3 159,392 - -0.5 159,392 - -0.7 159,392 - +0.3 159,392 - -1.3 159,392 - -0.7 159,392 - +0.0 159,392 - +0.3 159,392 - +0.1 159,392 - +1.7 159,392 - -0.2 159,392 - -0.5 159,392 - -0.7 159,392 - +1.0 159,392 - +0.3 159,392 - -0.0 159,392 - -1.3 159,392 - +0.0 159,392 - +1.1 159,392 - +1.0 159,392 - -0.5 159,392 - +0.5 159,471 - -0.1 159,512 + +0.4 159,512 + -0.3 159,513 - +0.2 159,513 - +0.1 159,513 - +0.2 159,529 - +0.2 159,617 - EX31_RS03360 0.16 +0.3 159,617 - EX31_RS03360 0.16 -0.3 159,640 - EX31_RS03360 0.21 -0.8 159,640 - EX31_RS03360 0.21 +0.9 159,725 - EX31_RS03360 0.36 +0.3 159,727 + EX31_RS03360 0.36 +0.9 159,727 + EX31_RS03360 0.36 -0.1 159,727 + EX31_RS03360 0.36 +3.9 159,727 + EX31_RS03360 0.36 +0.2 159,727 + EX31_RS03360 0.36 +0.7 159,728 - EX31_RS03360 0.37 +0.3 159,728 - EX31_RS03360 0.37 +0.2 159,728 - EX31_RS03360 0.37 +1.0 159,728 - EX31_RS03360 0.37 -0.6 159,762 + EX31_RS03360 0.43 -0.0 159,762 + EX31_RS03360 0.43 +0.2 159,763 - EX31_RS03360 0.43 +1.1 159,777 + EX31_RS03360 0.46 -1.3 159,780 + EX31_RS03360 0.46 -0.0 159,780 + EX31_RS03360 0.46 -0.1 159,781 - EX31_RS03360 0.46 +0.3 159,781 - EX31_RS03360 0.46 +0.6 159,792 + EX31_RS03360 0.48 +0.3 159,806 - EX31_RS03360 0.51 -0.2 159,806 - EX31_RS03360 0.51 -1.5 159,806 - EX31_RS03360 0.51 -1.7 159,873 + EX31_RS03360 0.63 -1.1 159,874 - EX31_RS03360 0.63 +1.0 159,970 + EX31_RS03360 0.81 +0.9 159,971 - EX31_RS03360 0.81 +0.8 159,971 - EX31_RS03360 0.81 -1.7 159,974 + EX31_RS03360 0.81 +1.6 159,974 + EX31_RS03360 0.81 +0.6 159,974 + EX31_RS03360 0.81 -0.4 159,974 + EX31_RS03360 0.81 -1.0 159,974 + EX31_RS03360 0.81 -0.7 159,974 + EX31_RS03360 0.81 -1.4 159,974 + EX31_RS03360 0.81 +0.7 159,975 - EX31_RS03360 0.82 -0.1 159,975 - EX31_RS03360 0.82 -0.3 159,975 - EX31_RS03360 0.82 +0.1 159,975 - EX31_RS03360 0.82 -1.5 159,975 - EX31_RS03360 0.82 +0.5 159,975 - EX31_RS03360 0.82 -0.7 160,061 + -0.8 160,061 + -0.4 160,061 + -1.4 160,062 - -1.5 160,062 - -0.3 160,064 + -0.6 160,064 + +0.2 160,065 - +1.3 160,065 - +0.9 160,065 - +0.5 160,065 - +1.3 160,065 - +0.2 160,065 - -0.3 160,065 - -1.3 160,094 + -2.0 160,094 + +1.7 160,094 + +1.7 160,094 + +2.3 160,095 - -0.3 160,095 - +1.3 160,308 + +1.1 160,325 + +0.3 160,349 - +1.1 160,349 - -0.6 160,404 + -1.8 160,404 + +0.2 160,404 + +0.8 160,404 + +0.4 160,404 + +0.0 160,404 + +0.3 160,404 + -0.5 160,404 + -0.6 160,404 + +0.6 160,404 + +1.3 160,404 + -0.9 160,404 + +0.1 160,404 + +0.4 160,404 + -0.5 160,404 + +1.2 160,404 + -0.3 160,404 + -0.1 160,405 - -0.5 160,405 - -0.0 160,405 - -0.4 160,405 - +2.9 160,405 - +2.1 160,405 - -1.3 160,405 - -0.8 160,405 - +1.3 160,405 - +0.9 160,405 - +0.3 160,405 - -0.7 160,405 - +0.2 160,405 - -2.2 160,405 - +2.3 160,405 - -0.4 160,405 - +0.9 160,405 - -0.4 160,405 - -0.5 160,405 - +0.9 160,405 - -2.0 160,405 - +0.1 160,405 - -0.1 160,405 - +0.9 160,405 - +0.6 160,405 - +0.5 160,417 + -1.5 160,432 + -1.5 160,433 - +0.6
Or see this region's nucleotide sequence