Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS19000

Experiment: L-Asparagine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Asparagine (N)
4,725,986	+				-1.2
4,725,993	-				+1.0
4,726,001	-				+1.6
4,726,008	+				+0.9
4,726,087	-				+0.5
4,726,090	+				+0.0
4,726,091	-				+0.4
4,726,097	+				+0.6
4,726,146	-				+0.7
4,726,177	-				+1.0
4,726,266	-				+1.0
4,726,271	+				-0.5
4,726,354	-				+0.8
4,726,380	-				+1.1
4,726,399	+				+1.1
4,726,523	-		CA265_RS18995	0.25	+0.3
4,726,678	+		CA265_RS18995	0.52	-1.8
4,726,706	-		CA265_RS18995	0.56	+0.4
4,726,711	+		CA265_RS18995	0.57	-2.9
4,726,746	-		CA265_RS18995	0.63	+1.5
4,726,789	+		CA265_RS18995	0.71	+0.4
4,726,789	+		CA265_RS18995	0.71	-1.1
4,726,823	+		CA265_RS18995	0.76	+0.7
4,726,857	+		CA265_RS18995	0.82	+0.1
4,726,858	-		CA265_RS18995	0.82	+0.4
4,726,861	+		CA265_RS18995	0.83	-0.8
4,726,885	-		CA265_RS18995	0.87	-0.8
4,726,991	+				-0.7
4,726,992	-				-0.4
4,726,993	+				-2.3
4,726,994	-				-0.5
4,727,039	+				-1.4
4,727,059	+				+0.1
4,727,059	+				-1.3
4,727,060	-				-0.6
4,727,076	-				-1.8
4,727,087	+				-2.1
4,727,087	+				-1.3
4,727,099	-				-1.2
4,727,154	-				-3.6
4,727,172	+				-0.7
4,727,173	-				-1.2
4,727,216	-		CA265_RS19000	0.11	-2.7
4,727,239	+		CA265_RS19000	0.12	-1.0
4,727,240	-		CA265_RS19000	0.12	-0.8
4,727,303	+		CA265_RS19000	0.15	-0.6
4,727,357	-		CA265_RS19000	0.17	-1.1
4,727,394	+		CA265_RS19000	0.18	-1.5
4,727,399	+		CA265_RS19000	0.19	-1.7
4,727,443	+		CA265_RS19000	0.21	-1.4
4,727,454	-		CA265_RS19000	0.21	-0.9
4,727,461	+		CA265_RS19000	0.21	-2.5
4,727,461	+		CA265_RS19000	0.21	-0.7
4,727,461	+		CA265_RS19000	0.21	-0.4
4,727,462	-		CA265_RS19000	0.21	-0.7
4,727,465	+		CA265_RS19000	0.22	-2.9
4,727,544	+		CA265_RS19000	0.25	+0.4
4,727,549	-		CA265_RS19000	0.25	-1.9
4,727,591	+		CA265_RS19000	0.27	-0.5
4,727,592	-		CA265_RS19000	0.27	+0.5
4,727,682	+		CA265_RS19000	0.31	-0.6
4,727,682	+		CA265_RS19000	0.31	-1.5
4,727,683	-		CA265_RS19000	0.31	-2.0
4,727,683	-		CA265_RS19000	0.31	-0.6
4,727,686	+		CA265_RS19000	0.31	+0.8
4,727,687	-		CA265_RS19000	0.31	-1.7
4,727,717	+		CA265_RS19000	0.32	-1.3
4,727,763	+		CA265_RS19000	0.34	-1.6
4,727,763	+		CA265_RS19000	0.34	-0.7
4,727,816	+		CA265_RS19000	0.37	-3.4
4,727,830	-		CA265_RS19000	0.37	-0.1
4,727,860	+		CA265_RS19000	0.39	-1.7
4,727,860	+		CA265_RS19000	0.39	+0.2
4,727,861	-		CA265_RS19000	0.39	-2.3
4,727,867	+		CA265_RS19000	0.39	-3.5
4,727,929	-		CA265_RS19000	0.42	-1.5
4,727,929	-		CA265_RS19000	0.42	-2.5
4,727,929	-		CA265_RS19000	0.42	-0.2
4,727,932	+		CA265_RS19000	0.42	-1.1
4,727,933	-		CA265_RS19000	0.42	-2.9
4,727,995	+		CA265_RS19000	0.44	-1.2
4,727,995	+		CA265_RS19000	0.44	-1.2
4,728,014	+		CA265_RS19000	0.45	-0.8
4,728,039	+		CA265_RS19000	0.46	-0.5
4,728,040	-		CA265_RS19000	0.46	-0.2
4,728,128	-		CA265_RS19000	0.50	-2.3
4,728,151	+		CA265_RS19000	0.51	-1.3
4,728,152	-		CA265_RS19000	0.51	+0.8
4,728,152	-		CA265_RS19000	0.51	+0.0
4,728,170	-		CA265_RS19000	0.52	-2.1
4,728,187	-		CA265_RS19000	0.53	-0.1
4,728,272	-		CA265_RS19000	0.56	-2.5
4,728,272	-		CA265_RS19000	0.56	-1.4
4,728,310	-		CA265_RS19000	0.58	-1.8
4,728,333	-		CA265_RS19000	0.59	-2.0
4,728,370	+		CA265_RS19000	0.61	-2.0
4,728,389	-		CA265_RS19000	0.61	-1.7
4,728,602	-		CA265_RS19000	0.71	-1.9
4,728,703	+		CA265_RS19000	0.75	-2.6
4,728,704	-		CA265_RS19000	0.75	-1.3
4,728,704	-		CA265_RS19000	0.75	-3.1
4,728,716	-		CA265_RS19000	0.76	-2.2
4,728,865	+		CA265_RS19000	0.82	+0.2
4,728,865	+		CA265_RS19000	0.82	-0.6
4,728,866	-		CA265_RS19000	0.82	-3.0
4,728,876	-		CA265_RS19000	0.82	-0.9
4,728,876	-		CA265_RS19000	0.82	-0.8
4,728,944	-		CA265_RS19000	0.85	+0.3
4,728,962	+		CA265_RS19000	0.86	-1.4
4,729,101	+				-0.2
4,729,101	+				+0.3
4,729,105	+				-3.0
4,729,105	+				-2.5
4,729,105	+				-1.4
4,729,106	-				-1.8
4,729,108	-				-0.6
4,729,164	+				-1.6
4,729,164	+				-0.4
4,729,165	-				-1.2
4,729,170	-				-2.3
4,729,175	+				-1.1
4,729,195	+				-1.8
4,729,211	+				-1.4
4,729,211	+				-0.7
4,729,211	+				-1.5
4,729,245	+				-1.4
4,729,246	-				-2.3
4,729,277	-				-2.5
4,729,287	+				-3.3
4,729,293	-				-0.1
4,729,413	+				+0.5
4,729,446	+				-0.2
4,729,447	-				+0.5
4,729,447	-				-2.4
4,729,497	+				-1.3
4,729,530	+				+2.5
4,729,591	-				+0.6
4,729,610	+				+0.7
4,729,645	-		CA265_RS19005	0.12	+0.4
4,729,658	+		CA265_RS19005	0.13	-0.6
4,729,732	+		CA265_RS19005	0.19	-0.0
4,729,740	-		CA265_RS19005	0.19	+0.5
4,729,740	-		CA265_RS19005	0.19	+2.1
4,729,776	+		CA265_RS19005	0.22	-0.5
4,729,787	+		CA265_RS19005	0.23	-0.9
4,729,803	+		CA265_RS19005	0.24	+0.1
4,729,804	-		CA265_RS19005	0.24	-1.0
4,729,840	+		CA265_RS19005	0.26	+0.1
4,729,841	-		CA265_RS19005	0.26	-0.5
4,729,911	+		CA265_RS19005	0.31	-0.0
4,729,950	+		CA265_RS19005	0.34	+0.9
4,729,951	-		CA265_RS19005	0.34	+1.1
4,729,978	+		CA265_RS19005	0.36	+1.1
4,730,014	-		CA265_RS19005	0.39	-0.5
4,730,052	+		CA265_RS19005	0.41	+0.5
4,730,053	-		CA265_RS19005	0.41	+0.0
4,730,153	+		CA265_RS19005	0.49	+0.7
4,730,167	-		CA265_RS19005	0.50	+0.5
4,730,279	+		CA265_RS19005	0.58	+0.7