Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS16085

Experiment: L-Asparagine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Asparagine (N)
4,038,975	+		CA265_RS16080	0.80	+0.0
4,039,013	+		CA265_RS16080	0.81	+1.0
4,039,135	-		CA265_RS16080	0.83	+0.3
4,039,176	+		CA265_RS16080	0.84	-1.9
4,039,188	-		CA265_RS16080	0.84	-1.5
4,039,188	-		CA265_RS16080	0.84	-3.1
4,039,190	-		CA265_RS16080	0.84	-2.9
4,039,221	-		CA265_RS16080	0.85	-2.0
4,039,256	+		CA265_RS16080	0.86	+0.2
4,039,295	+		CA265_RS16080	0.86	-1.4
4,039,349	+		CA265_RS16080	0.87	-3.3
4,039,350	-		CA265_RS16080	0.87	-1.5
4,039,363	+		CA265_RS16080	0.88	-0.5
4,039,363	+		CA265_RS16080	0.88	-1.6
4,039,364	-		CA265_RS16080	0.88	-2.3
4,039,366	-		CA265_RS16080	0.88	+0.8
4,039,453	-		CA265_RS16080	0.89	-0.6
4,039,494	+				-1.6
4,039,495	-				-2.2
4,039,547	+				-0.2
4,039,560	-				+0.6
4,039,578	+				+1.5
4,039,579	-				-2.5
4,039,590	-				-1.6
4,039,657	-				-2.0
4,039,766	+				-1.1
4,039,766	+				-1.9
4,039,767	-				-2.5
4,039,778	+				-0.2
4,039,830	+				+0.3
4,039,831	-				-1.6
4,039,838	+				-1.5
4,039,884	-				-1.5
4,039,888	+				-2.2
4,039,888	+				-2.1
4,039,889	-				-2.0
4,039,889	-				-3.2
4,039,889	-				-1.9
4,040,140	+				-2.1
4,040,141	-				-0.9
4,040,162	-				-0.5
4,040,198	+		CA265_RS16085	0.10	-0.8
4,040,272	-		CA265_RS16085	0.13	-0.9
4,040,287	-		CA265_RS16085	0.14	-2.1
4,040,311	-		CA265_RS16085	0.15	-1.1
4,040,390	-		CA265_RS16085	0.19	+0.0
4,040,399	+		CA265_RS16085	0.19	-0.2
4,040,401	+		CA265_RS16085	0.19	-1.3
4,040,522	+		CA265_RS16085	0.24	+1.4
4,040,522	+		CA265_RS16085	0.24	-2.4
4,040,662	+		CA265_RS16085	0.30	-2.2
4,040,662	+		CA265_RS16085	0.30	-1.3
4,040,694	+		CA265_RS16085	0.32	-0.6
4,040,702	+		CA265_RS16085	0.32	-0.5
4,040,702	+		CA265_RS16085	0.32	-1.1
4,040,702	+		CA265_RS16085	0.32	-0.9
4,040,724	+		CA265_RS16085	0.33	-1.9
4,040,724	+		CA265_RS16085	0.33	-1.0
4,040,725	-		CA265_RS16085	0.33	-1.2
4,040,725	-		CA265_RS16085	0.33	-1.0
4,040,727	-		CA265_RS16085	0.33	-2.2
4,040,735	+		CA265_RS16085	0.33	+0.6
4,040,736	-		CA265_RS16085	0.33	-1.0
4,040,753	-		CA265_RS16085	0.34	+0.3
4,040,778	+		CA265_RS16085	0.35	-0.8
4,040,784	-		CA265_RS16085	0.36	-0.2
4,040,802	-		CA265_RS16085	0.36	-0.8
4,040,870	+		CA265_RS16085	0.39	-3.0
4,040,871	-		CA265_RS16085	0.39	-0.3
4,040,917	-		CA265_RS16085	0.41	-0.7
4,040,934	+		CA265_RS16085	0.42	-4.7
4,040,935	-		CA265_RS16085	0.42	-3.7
4,040,935	-		CA265_RS16085	0.42	-2.2
4,040,960	-		CA265_RS16085	0.43	-0.2
4,041,046	+		CA265_RS16085	0.47	-2.0
4,041,100	+		CA265_RS16085	0.49	-2.0
4,041,123	+		CA265_RS16085	0.50	-0.3
4,041,230	-		CA265_RS16085	0.55	+0.2
4,041,254	-		CA265_RS16085	0.56	-1.0
4,041,350	+		CA265_RS16085	0.60	-1.2
4,041,350	+		CA265_RS16085	0.60	-1.9
4,041,351	-		CA265_RS16085	0.60	-1.5
4,041,351	-		CA265_RS16085	0.60	-0.7
4,041,356	+		CA265_RS16085	0.60	-1.0
4,041,409	+		CA265_RS16085	0.63	-1.5
4,041,413	+		CA265_RS16085	0.63	+0.0
4,041,414	-		CA265_RS16085	0.63	-2.5
4,041,456	+		CA265_RS16085	0.65	-2.2
4,041,457	-		CA265_RS16085	0.65	-1.8
4,041,458	+		CA265_RS16085	0.65	-1.7
4,041,458	+		CA265_RS16085	0.65	-3.4
4,041,515	-		CA265_RS16085	0.67	-2.3
4,041,533	-		CA265_RS16085	0.68	-1.9
4,041,551	-		CA265_RS16085	0.69	+0.0
4,041,563	-		CA265_RS16085	0.69	-0.6
4,041,677	-		CA265_RS16085	0.74	-1.6
4,041,707	-		CA265_RS16085	0.75	+0.4
4,041,814	+		CA265_RS16085	0.80	-3.5
4,041,817	+		CA265_RS16085	0.80	-3.5
4,041,818	-		CA265_RS16085	0.80	-0.9
4,041,824	-		CA265_RS16085	0.80	-0.5
4,041,863	+		CA265_RS16085	0.82	+1.0
4,041,910	+		CA265_RS16085	0.84	-0.5
4,041,915	+		CA265_RS16085	0.84	-2.4
4,041,916	-		CA265_RS16085	0.84	-1.0
4,041,941	-		CA265_RS16085	0.85	-2.3
4,041,954	+		CA265_RS16085	0.86	+1.2
4,041,955	-		CA265_RS16085	0.86	-1.9
4,041,970	-		CA265_RS16085	0.87	-1.5
4,041,976	-		CA265_RS16085	0.87	+0.1
4,041,976	-		CA265_RS16085	0.87	-0.6
4,041,989	-		CA265_RS16085	0.88	-0.5
4,042,163	-				-1.6
4,042,169	+				-1.0
4,042,205	-				-1.9
4,042,220	-				+0.5
4,042,299	-				+0.8
4,042,360	+				+0.3
4,042,367	+				-0.1
4,042,367	+				+0.3
4,042,368	-				+0.3
4,042,401	+		CA265_RS16090	0.11	-0.7
4,042,419	-		CA265_RS16090	0.13	+0.5
4,042,434	-		CA265_RS16090	0.15	-0.3
4,042,538	+		CA265_RS16090	0.25	+0.0
4,042,538	+		CA265_RS16090	0.25	+0.5
4,042,558	+		CA265_RS16090	0.27	-0.7
4,042,559	-		CA265_RS16090	0.27	-0.6
4,042,623	-		CA265_RS16090	0.33	-0.3
4,042,651	+		CA265_RS16090	0.36	+0.5
4,042,651	+		CA265_RS16090	0.36	-0.3
4,042,652	-		CA265_RS16090	0.36	+0.1
4,042,659	-		CA265_RS16090	0.37	+0.8
4,042,730	-		CA265_RS16090	0.44	-0.7
4,042,744	+		CA265_RS16090	0.45	-0.5
4,042,745	-		CA265_RS16090	0.45	+0.4
4,042,766	-		CA265_RS16090	0.47	+0.6
4,042,798	+		CA265_RS16090	0.50	-0.2
4,042,798	+		CA265_RS16090	0.50	-0.7
4,042,799	-		CA265_RS16090	0.50	-0.1
4,042,874	+		CA265_RS16090	0.58	-0.3
4,042,894	-		CA265_RS16090	0.60	+0.5
4,042,900	+		CA265_RS16090	0.60	-1.0
4,042,910	-		CA265_RS16090	0.61	+0.0
4,042,948	+		CA265_RS16090	0.65	+0.5
4,043,006	-		CA265_RS16090	0.71	-2.4
4,043,041	+		CA265_RS16090	0.74	-0.1
4,043,053	-		CA265_RS16090	0.75	+0.2
4,043,124	+		CA265_RS16090	0.82	-0.3
4,043,124	+		CA265_RS16090	0.82	-0.6
4,043,127	+		CA265_RS16090	0.82	-0.6
4,043,138	+		CA265_RS16090	0.83	-1.1
4,043,172	+		CA265_RS16090	0.87	+0.1
4,043,173	-		CA265_RS16090	0.87	-0.2
4,043,223	-				+1.5
4,043,257	+				-0.1
4,043,258	-				-0.2
4,043,258	-				+1.4
4,043,258	-				-0.2
4,043,258	-				+0.1
4,043,258	-				-2.2