Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS16080

Experiment: L-Asparagine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Asparagine (N)
4,034,040	-				+1.1
4,034,067	+				+0.6
4,034,074	-				+0.9
4,034,079	+				-0.4
4,034,083	+				+0.1
4,034,083	+				-2.6
4,034,096	+				+0.2
4,034,097	-				+0.3
4,034,097	-				+0.2
4,034,102	+				+1.0
4,034,106	+				-0.1
4,034,106	+				+0.2
4,034,124	+				+2.4
4,034,229	-				+0.4
4,034,255	-				+0.4
4,034,282	+				+0.8
4,034,309	+				+0.3
4,034,314	-				+1.5
4,034,316	-				+0.5
4,034,363	+				+0.6
4,034,388	+				+0.0
4,034,398	-		CA265_RS16075	0.10	-0.6
4,034,398	-		CA265_RS16075	0.10	-0.8
4,034,415	+		CA265_RS16075	0.13	-0.5
4,034,725	+		CA265_RS16075	0.77	-1.3
4,034,725	+		CA265_RS16075	0.77	-0.0
4,034,726	-		CA265_RS16075	0.77	-0.2
4,034,726	-		CA265_RS16075	0.77	+0.4
4,034,737	-		CA265_RS16075	0.79	-0.4
4,034,769	-		CA265_RS16075	0.86	-0.2
4,034,769	-		CA265_RS16075	0.86	-0.6
4,034,769	-		CA265_RS16075	0.86	-2.5
4,034,816	+				+0.6
4,034,816	+				-0.6
4,034,817	-				-0.1
4,034,845	+				+1.2
4,034,846	-				-0.8
4,034,850	-				+0.4
4,034,867	-				-0.2
4,034,981	+				+0.1
4,035,000	-				-0.1
4,035,075	-				-0.5
4,035,121	+				-1.0
4,035,126	+				-3.2
4,035,209	+				-0.7
4,035,236	+				-3.6
4,035,236	+				-1.2
4,035,239	-				-1.7
4,035,527	+		CA265_RS16080	0.11	-0.4
4,035,583	+		CA265_RS16080	0.12	-1.2
4,035,587	+		CA265_RS16080	0.12	-2.9
4,035,587	+		CA265_RS16080	0.12	-1.6
4,035,587	+		CA265_RS16080	0.12	-2.1
4,035,588	-		CA265_RS16080	0.12	+0.3
4,035,600	-		CA265_RS16080	0.12	-1.7
4,035,613	-		CA265_RS16080	0.13	-2.1
4,035,621	-		CA265_RS16080	0.13	-0.2
4,035,625	+		CA265_RS16080	0.13	+0.6
4,035,626	-				-0.5
4,035,644	+		CA265_RS16080	0.13	-0.5
4,035,644	+		CA265_RS16080	0.13	-1.6
4,035,657	-		CA265_RS16080	0.13	-1.2
4,035,713	+		CA265_RS16080	0.15	-0.4
4,035,753	-		CA265_RS16080	0.15	+1.8
4,035,843	+		CA265_RS16080	0.17	-3.5
4,035,848	-		CA265_RS16080	0.17	-0.7
4,035,930	+		CA265_RS16080	0.19	-0.7
4,035,930	+		CA265_RS16080	0.19	-0.1
4,035,942	-		CA265_RS16080	0.19	-1.2
4,035,972	+		CA265_RS16080	0.20	-1.6
4,036,098	-		CA265_RS16080	0.22	-1.2
4,036,102	+		CA265_RS16080	0.22	-2.4
4,036,103	-		CA265_RS16080	0.22	-2.1
4,036,104	+		CA265_RS16080	0.22	-1.2
4,036,196	-		CA265_RS16080	0.24	-1.6
4,036,212	+		CA265_RS16080	0.25	-2.9
4,036,222	-		CA265_RS16080	0.25	-1.1
4,036,397	-		CA265_RS16080	0.28	+0.3
4,036,431	+		CA265_RS16080	0.29	+0.3
4,036,553	+		CA265_RS16080	0.31	-1.1
4,036,576	-		CA265_RS16080	0.32	-1.8
4,036,576	-		CA265_RS16080	0.32	-3.5
4,036,601	+				+0.3
4,036,643	+		CA265_RS16080	0.33	-0.5
4,036,769	-		CA265_RS16080	0.36	-1.4
4,036,936	+		CA265_RS16080	0.39	-1.9
4,036,936	+		CA265_RS16080	0.39	+0.1
4,036,938	+		CA265_RS16080	0.39	-0.7
4,036,938	+		CA265_RS16080	0.39	-3.5
4,036,938	+		CA265_RS16080	0.39	-1.0
4,036,939	-		CA265_RS16080	0.39	+1.0
4,036,939	-		CA265_RS16080	0.39	+0.9
4,036,942	+		CA265_RS16080	0.39	-0.3
4,036,970	-		CA265_RS16080	0.40	-1.5
4,037,011	-		CA265_RS16080	0.41	-1.8
4,037,059	+		CA265_RS16080	0.42	-3.5
4,037,060	-		CA265_RS16080	0.42	-2.0
4,037,069	+		CA265_RS16080	0.42	-1.5
4,037,070	-		CA265_RS16080	0.42	-0.7
4,037,081	+		CA265_RS16080	0.42	+0.4
4,037,129	+		CA265_RS16080	0.43	-2.1
4,037,156	+		CA265_RS16080	0.43	-0.5
4,037,182	+		CA265_RS16080	0.44	-2.4
4,037,183	-		CA265_RS16080	0.44	+0.7
4,037,223	-		CA265_RS16080	0.45	-0.2
4,037,300	+		CA265_RS16080	0.46	-0.5
4,037,313	-		CA265_RS16080	0.47	-1.7
4,037,410	-		CA265_RS16080	0.49	-1.6
4,037,449	+		CA265_RS16080	0.49	-0.5
4,037,449	+		CA265_RS16080	0.49	-2.0
4,037,450	-		CA265_RS16080	0.49	-3.5
4,037,450	-		CA265_RS16080	0.49	-2.7
4,037,573	+		CA265_RS16080	0.52	-1.1
4,037,573	+		CA265_RS16080	0.52	-2.2
4,037,573	+		CA265_RS16080	0.52	-2.4
4,037,573	+		CA265_RS16080	0.52	+0.6
4,037,574	-		CA265_RS16080	0.52	+0.3
4,037,629	-		CA265_RS16080	0.53	-1.5
4,037,638	+		CA265_RS16080	0.53	-0.5
4,037,673	+		CA265_RS16080	0.54	-1.1
4,037,674	-		CA265_RS16080	0.54	-1.0
4,037,768	-		CA265_RS16080	0.56	-1.0
4,037,876	-		CA265_RS16080	0.58	+0.8
4,037,994	+		CA265_RS16080	0.60	-1.9
4,038,081	+		CA265_RS16080	0.62	-2.7
4,038,165	-		CA265_RS16080	0.64	-0.5
4,038,259	-		CA265_RS16080	0.66	+0.8
4,038,278	+		CA265_RS16080	0.66	-3.4
4,038,346	-		CA265_RS16080	0.67	-1.3
4,038,379	-		CA265_RS16080	0.68	+0.5
4,038,459	-		CA265_RS16080	0.70	-2.1
4,038,467	-		CA265_RS16080	0.70	-0.7
4,038,498	+		CA265_RS16080	0.70	-2.0
4,038,499	-				+1.8
4,038,528	+		CA265_RS16080	0.71	-3.0
4,038,563	+		CA265_RS16080	0.72	-0.5
4,038,578	-		CA265_RS16080	0.72	-0.5
4,038,580	-		CA265_RS16080	0.72	-0.7
4,038,611	+		CA265_RS16080	0.73	-1.9
4,038,734	+		CA265_RS16080	0.75	+0.1
4,038,763	-		CA265_RS16080	0.76	-2.9
4,038,831	+		CA265_RS16080	0.77	-0.5
4,038,831	+		CA265_RS16080	0.77	-0.7
4,038,832	-		CA265_RS16080	0.77	-1.2
4,038,892	-		CA265_RS16080	0.78	-1.0
4,038,912	-		CA265_RS16080	0.79	-1.8
4,038,975	+		CA265_RS16080	0.80	+0.0
4,039,013	+		CA265_RS16080	0.81	+1.0
4,039,135	-		CA265_RS16080	0.83	+0.3
4,039,176	+		CA265_RS16080	0.84	-1.9
4,039,188	-		CA265_RS16080	0.84	-1.5
4,039,188	-		CA265_RS16080	0.84	-3.1
4,039,190	-		CA265_RS16080	0.84	-2.9
4,039,221	-		CA265_RS16080	0.85	-2.0
4,039,256	+		CA265_RS16080	0.86	+0.2
4,039,295	+		CA265_RS16080	0.86	-1.4
4,039,349	+		CA265_RS16080	0.87	-3.3
4,039,350	-		CA265_RS16080	0.87	-1.5
4,039,363	+		CA265_RS16080	0.88	-0.5
4,039,363	+		CA265_RS16080	0.88	-1.6
4,039,364	-		CA265_RS16080	0.88	-2.3
4,039,366	-		CA265_RS16080	0.88	+0.8
4,039,453	-		CA265_RS16080	0.89	-0.6
4,039,494	+				-1.6
4,039,495	-				-2.2
4,039,547	+				-0.2
4,039,560	-				+0.6
4,039,578	+				+1.5
4,039,579	-				-2.5
4,039,590	-				-1.6
4,039,657	-				-2.0
4,039,766	+				-1.1
4,039,766	+				-1.9
4,039,767	-				-2.5
4,039,778	+				-0.2
4,039,830	+				+0.3
4,039,831	-				-1.6
4,039,838	+				-1.5
4,039,884	-				-1.5
4,039,888	+				-2.2
4,039,888	+				-2.1
4,039,889	-				-2.0
4,039,889	-				-3.2
4,039,889	-				-1.9
4,040,140	+				-2.1
4,040,141	-				-0.9
4,040,162	-				-0.5
4,040,198	+		CA265_RS16085	0.10	-0.8
4,040,272	-		CA265_RS16085	0.13	-0.9
4,040,287	-		CA265_RS16085	0.14	-2.1
4,040,311	-		CA265_RS16085	0.15	-1.1
4,040,390	-		CA265_RS16085	0.19	+0.0
4,040,399	+		CA265_RS16085	0.19	-0.2
4,040,401	+		CA265_RS16085	0.19	-1.3
4,040,522	+		CA265_RS16085	0.24	+1.4
4,040,522	+		CA265_RS16085	0.24	-2.4
4,040,662	+		CA265_RS16085	0.30	-2.2
4,040,662	+		CA265_RS16085	0.30	-1.3
4,040,694	+		CA265_RS16085	0.32	-0.6
4,040,702	+		CA265_RS16085	0.32	-0.5
4,040,702	+		CA265_RS16085	0.32	-1.1
4,040,702	+		CA265_RS16085	0.32	-0.9
4,040,724	+		CA265_RS16085	0.33	-1.9
4,040,724	+		CA265_RS16085	0.33	-1.0
4,040,725	-		CA265_RS16085	0.33	-1.2
4,040,725	-		CA265_RS16085	0.33	-1.0
4,040,727	-		CA265_RS16085	0.33	-2.2
4,040,735	+		CA265_RS16085	0.33	+0.6
4,040,736	-		CA265_RS16085	0.33	-1.0
4,040,753	-		CA265_RS16085	0.34	+0.3
4,040,778	+		CA265_RS16085	0.35	-0.8
4,040,784	-		CA265_RS16085	0.36	-0.2
4,040,802	-		CA265_RS16085	0.36	-0.8
4,040,870	+		CA265_RS16085	0.39	-3.0
4,040,871	-		CA265_RS16085	0.39	-0.3
4,040,917	-		CA265_RS16085	0.41	-0.7
4,040,934	+		CA265_RS16085	0.42	-4.7
4,040,935	-		CA265_RS16085	0.42	-3.7
4,040,935	-		CA265_RS16085	0.42	-2.2
4,040,960	-		CA265_RS16085	0.43	-0.2