Experiment: L-Asparagine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS06825 and CA265_RS06830 are separated by 18 nucleotides CA265_RS06830 and CA265_RS06835 are separated by 38 nucleotides CA265_RS06835 and CA265_RS06840 are separated by 26 nucleotides
CA265_RS06825: CA265_RS06825 - hypothetical protein, at 1,693,294 to 1,694,274
_RS06825
CA265_RS06830: CA265_RS06830 - hypothetical protein, at 1,694,293 to 1,695,237
_RS06830
CA265_RS06835: CA265_RS06835 - hypothetical protein, at 1,695,276 to 1,695,968
_RS06835
CA265_RS06840: CA265_RS06840 - hypothetical protein, at 1,695,995 to 1,698,910
_RS06840
Position (kb)
1694
1695
1696 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1693.338 kb on - strand at 1693.373 kb on + strand at 1693.373 kb on + strand at 1693.571 kb on - strand, within CA265_RS06825 at 1693.606 kb on - strand, within CA265_RS06825 at 1693.642 kb on + strand, within CA265_RS06825 at 1693.704 kb on + strand, within CA265_RS06825 at 1693.743 kb on + strand, within CA265_RS06825 at 1693.743 kb on + strand, within CA265_RS06825 at 1693.798 kb on + strand, within CA265_RS06825 at 1693.799 kb on - strand, within CA265_RS06825 at 1693.799 kb on - strand, within CA265_RS06825 at 1693.819 kb on + strand, within CA265_RS06825 at 1693.865 kb on - strand, within CA265_RS06825 at 1693.865 kb on - strand, within CA265_RS06825 at 1693.869 kb on + strand, within CA265_RS06825 at 1693.870 kb on - strand, within CA265_RS06825 at 1693.870 kb on - strand, within CA265_RS06825 at 1693.891 kb on + strand at 1694.064 kb on + strand, within CA265_RS06825 at 1694.127 kb on - strand, within CA265_RS06825 at 1694.166 kb on - strand, within CA265_RS06825 at 1694.183 kb on + strand at 1694.235 kb on + strand at 1694.290 kb on + strand at 1694.308 kb on + strand at 1694.356 kb on - strand at 1694.364 kb on - strand at 1694.364 kb on - strand at 1694.433 kb on + strand, within CA265_RS06830 at 1694.495 kb on + strand, within CA265_RS06830 at 1694.566 kb on - strand, within CA265_RS06830 at 1694.580 kb on + strand, within CA265_RS06830 at 1694.580 kb on + strand, within CA265_RS06830 at 1694.580 kb on + strand, within CA265_RS06830 at 1694.581 kb on - strand, within CA265_RS06830 at 1694.738 kb on + strand, within CA265_RS06830 at 1694.738 kb on + strand, within CA265_RS06830 at 1694.739 kb on - strand, within CA265_RS06830 at 1694.807 kb on - strand, within CA265_RS06830 at 1694.838 kb on + strand, within CA265_RS06830 at 1694.858 kb on + strand, within CA265_RS06830 at 1694.915 kb on - strand, within CA265_RS06830 at 1694.926 kb on - strand, within CA265_RS06830 at 1694.973 kb on + strand, within CA265_RS06830 at 1694.974 kb on - strand, within CA265_RS06830 at 1695.005 kb on + strand, within CA265_RS06830 at 1695.010 kb on - strand, within CA265_RS06830 at 1695.078 kb on + strand, within CA265_RS06830 at 1695.078 kb on + strand, within CA265_RS06830 at 1695.081 kb on - strand, within CA265_RS06830 at 1695.230 kb on - strand at 1695.353 kb on + strand at 1695.354 kb on - strand, within CA265_RS06835 at 1695.382 kb on + strand, within CA265_RS06835 at 1695.399 kb on + strand, within CA265_RS06835 at 1695.403 kb on + strand, within CA265_RS06835 at 1695.409 kb on - strand, within CA265_RS06835 at 1695.461 kb on - strand, within CA265_RS06835 at 1695.474 kb on - strand, within CA265_RS06835 at 1695.483 kb on + strand, within CA265_RS06835 at 1695.512 kb on + strand, within CA265_RS06835 at 1695.513 kb on - strand, within CA265_RS06835 at 1695.524 kb on - strand, within CA265_RS06835 at 1695.524 kb on - strand, within CA265_RS06835 at 1695.536 kb on + strand, within CA265_RS06835 at 1695.537 kb on - strand, within CA265_RS06835 at 1695.624 kb on + strand, within CA265_RS06835 at 1695.641 kb on - strand, within CA265_RS06835 at 1695.692 kb on + strand, within CA265_RS06835 at 1695.692 kb on + strand, within CA265_RS06835 at 1695.699 kb on + strand, within CA265_RS06835 at 1695.703 kb on + strand, within CA265_RS06835 at 1695.761 kb on + strand, within CA265_RS06835 at 1695.996 kb on + strand at 1696.022 kb on + strand at 1696.022 kb on + strand at 1696.022 kb on + strand at 1696.023 kb on - strand at 1696.124 kb on + strand at 1696.205 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (N) remove 1,693,338 - +0.4 1,693,373 + +0.1 1,693,373 + -0.3 1,693,571 - CA265_RS06825 0.28 -1.8 1,693,606 - CA265_RS06825 0.32 +0.8 1,693,642 + CA265_RS06825 0.35 -0.2 1,693,704 + CA265_RS06825 0.42 +0.2 1,693,743 + CA265_RS06825 0.46 -0.6 1,693,743 + CA265_RS06825 0.46 -0.5 1,693,798 + CA265_RS06825 0.51 -0.6 1,693,799 - CA265_RS06825 0.51 +1.5 1,693,799 - CA265_RS06825 0.51 +0.3 1,693,819 + CA265_RS06825 0.54 -1.9 1,693,865 - CA265_RS06825 0.58 +0.4 1,693,865 - CA265_RS06825 0.58 +0.9 1,693,869 + CA265_RS06825 0.59 +0.3 1,693,870 - CA265_RS06825 0.59 +0.2 1,693,870 - CA265_RS06825 0.59 -0.4 1,693,891 + +0.6 1,694,064 + CA265_RS06825 0.78 +1.1 1,694,127 - CA265_RS06825 0.85 -2.4 1,694,166 - CA265_RS06825 0.89 +0.2 1,694,183 + +0.5 1,694,235 + +2.0 1,694,290 + -1.8 1,694,308 + +1.7 1,694,356 - +0.3 1,694,364 - +0.0 1,694,364 - -1.2 1,694,433 + CA265_RS06830 0.15 -0.3 1,694,495 + CA265_RS06830 0.21 -0.4 1,694,566 - CA265_RS06830 0.29 +0.6 1,694,580 + CA265_RS06830 0.30 -0.4 1,694,580 + CA265_RS06830 0.30 -0.6 1,694,580 + CA265_RS06830 0.30 -0.6 1,694,581 - CA265_RS06830 0.30 +0.0 1,694,738 + CA265_RS06830 0.47 +0.2 1,694,738 + CA265_RS06830 0.47 -0.1 1,694,739 - CA265_RS06830 0.47 +1.1 1,694,807 - CA265_RS06830 0.54 +1.2 1,694,838 + CA265_RS06830 0.58 +0.1 1,694,858 + CA265_RS06830 0.60 +0.0 1,694,915 - CA265_RS06830 0.66 -0.5 1,694,926 - CA265_RS06830 0.67 +0.1 1,694,973 + CA265_RS06830 0.72 -0.5 1,694,974 - CA265_RS06830 0.72 -0.4 1,695,005 + CA265_RS06830 0.75 -0.1 1,695,010 - CA265_RS06830 0.76 -2.1 1,695,078 + CA265_RS06830 0.83 -0.4 1,695,078 + CA265_RS06830 0.83 -0.9 1,695,081 - CA265_RS06830 0.83 -0.2 1,695,230 - +0.6 1,695,353 + -0.4 1,695,354 - CA265_RS06835 0.11 +0.4 1,695,382 + CA265_RS06835 0.15 +0.1 1,695,399 + CA265_RS06835 0.18 +1.3 1,695,403 + CA265_RS06835 0.18 -0.2 1,695,409 - CA265_RS06835 0.19 +0.5 1,695,461 - CA265_RS06835 0.27 +0.6 1,695,474 - CA265_RS06835 0.29 +0.3 1,695,483 + CA265_RS06835 0.30 -1.5 1,695,512 + CA265_RS06835 0.34 -0.3 1,695,513 - CA265_RS06835 0.34 -0.2 1,695,524 - CA265_RS06835 0.36 +0.4 1,695,524 - CA265_RS06835 0.36 +0.4 1,695,536 + CA265_RS06835 0.38 +0.7 1,695,537 - CA265_RS06835 0.38 -0.4 1,695,624 + CA265_RS06835 0.50 +0.1 1,695,641 - CA265_RS06835 0.53 +1.1 1,695,692 + CA265_RS06835 0.60 -0.4 1,695,692 + CA265_RS06835 0.60 -0.2 1,695,699 + CA265_RS06835 0.61 -0.2 1,695,703 + CA265_RS06835 0.62 -1.2 1,695,761 + CA265_RS06835 0.70 -0.7 1,695,996 + +0.3 1,696,022 + -0.3 1,696,022 + -0.0 1,696,022 + -0.9 1,696,023 - +0.2 1,696,124 + -0.9 1,696,205 - -0.2
Or see this region's nucleotide sequence