Experiment: L-Asparagine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS04115 and CA265_RS04120 are separated by 120 nucleotides CA265_RS04120 and CA265_RS04125 are separated by 416 nucleotides
CA265_RS04115: CA265_RS04115 - sulfate adenylyltransferase, at 990,502 to 991,407
_RS04115
CA265_RS04120: CA265_RS04120 - sulfate adenylyltransferase, at 991,528 to 992,778
_RS04120
CA265_RS04125: CA265_RS04125 - multidrug transporter, at 993,195 to 994,204
_RS04125
Position (kb) 991
992
993 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 990.693 kb on + strand, within CA265_RS04115 at 990.721 kb on - strand, within CA265_RS04115 at 990.725 kb on - strand, within CA265_RS04115 at 990.789 kb on - strand, within CA265_RS04115 at 990.877 kb on + strand, within CA265_RS04115 at 990.877 kb on + strand, within CA265_RS04115 at 991.013 kb on - strand, within CA265_RS04115 at 991.090 kb on + strand, within CA265_RS04115 at 991.190 kb on + strand, within CA265_RS04115 at 991.190 kb on + strand, within CA265_RS04115 at 991.194 kb on + strand, within CA265_RS04115 at 991.252 kb on - strand, within CA265_RS04115 at 991.303 kb on - strand, within CA265_RS04115 at 991.303 kb on - strand, within CA265_RS04115 at 991.495 kb on - strand at 991.536 kb on - strand at 991.572 kb on + strand at 991.606 kb on - strand at 991.606 kb on - strand at 991.676 kb on + strand, within CA265_RS04120 at 991.739 kb on + strand, within CA265_RS04120 at 991.776 kb on + strand, within CA265_RS04120 at 991.776 kb on + strand, within CA265_RS04120 at 991.789 kb on - strand, within CA265_RS04120 at 991.808 kb on - strand, within CA265_RS04120 at 991.809 kb on + strand, within CA265_RS04120 at 991.810 kb on - strand, within CA265_RS04120 at 991.906 kb on + strand, within CA265_RS04120 at 991.907 kb on - strand at 991.962 kb on + strand, within CA265_RS04120 at 991.972 kb on + strand, within CA265_RS04120 at 991.987 kb on + strand, within CA265_RS04120 at 992.051 kb on - strand, within CA265_RS04120 at 992.113 kb on + strand, within CA265_RS04120 at 992.114 kb on - strand, within CA265_RS04120 at 992.141 kb on + strand, within CA265_RS04120 at 992.170 kb on - strand, within CA265_RS04120 at 992.170 kb on - strand, within CA265_RS04120 at 992.196 kb on - strand, within CA265_RS04120 at 992.229 kb on - strand, within CA265_RS04120 at 992.258 kb on + strand, within CA265_RS04120 at 992.259 kb on - strand, within CA265_RS04120 at 992.298 kb on - strand, within CA265_RS04120 at 992.385 kb on + strand, within CA265_RS04120 at 992.385 kb on + strand, within CA265_RS04120 at 992.432 kb on + strand, within CA265_RS04120 at 992.433 kb on - strand, within CA265_RS04120 at 992.505 kb on - strand, within CA265_RS04120 at 992.509 kb on - strand, within CA265_RS04120 at 992.526 kb on + strand, within CA265_RS04120 at 992.592 kb on + strand, within CA265_RS04120 at 992.623 kb on - strand, within CA265_RS04120 at 992.652 kb on + strand, within CA265_RS04120 at 992.681 kb on + strand at 992.724 kb on + strand at 992.724 kb on + strand at 992.725 kb on - strand at 992.731 kb on - strand at 992.771 kb on + strand at 992.793 kb on + strand at 992.793 kb on + strand at 992.854 kb on - strand at 992.866 kb on + strand at 992.919 kb on - strand at 992.992 kb on + strand at 993.021 kb on - strand at 993.023 kb on + strand at 993.147 kb on + strand at 993.152 kb on + strand at 993.170 kb on + strand at 993.251 kb on + strand at 993.252 kb on - strand at 993.353 kb on + strand, within CA265_RS04125 at 993.368 kb on + strand, within CA265_RS04125 at 993.373 kb on + strand, within CA265_RS04125 at 993.373 kb on + strand, within CA265_RS04125 at 993.373 kb on + strand, within CA265_RS04125 at 993.373 kb on + strand, within CA265_RS04125 at 993.396 kb on - strand, within CA265_RS04125 at 993.602 kb on - strand, within CA265_RS04125 at 993.607 kb on - strand, within CA265_RS04125 at 993.607 kb on - strand, within CA265_RS04125 at 993.612 kb on - strand, within CA265_RS04125 at 993.622 kb on - strand, within CA265_RS04125 at 993.623 kb on + strand, within CA265_RS04125 at 993.651 kb on + strand, within CA265_RS04125 at 993.671 kb on + strand, within CA265_RS04125 at 993.738 kb on + strand, within CA265_RS04125
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (N) remove 990,693 + CA265_RS04115 0.21 -1.0 990,721 - CA265_RS04115 0.24 -1.4 990,725 - CA265_RS04115 0.25 -0.4 990,789 - CA265_RS04115 0.32 -1.5 990,877 + CA265_RS04115 0.41 -3.2 990,877 + CA265_RS04115 0.41 +0.6 991,013 - CA265_RS04115 0.56 -1.2 991,090 + CA265_RS04115 0.65 -2.6 991,190 + CA265_RS04115 0.76 -1.6 991,190 + CA265_RS04115 0.76 -3.3 991,194 + CA265_RS04115 0.76 -1.4 991,252 - CA265_RS04115 0.83 -1.3 991,303 - CA265_RS04115 0.88 -2.6 991,303 - CA265_RS04115 0.88 -0.7 991,495 - -1.9 991,536 - -0.4 991,572 + -0.9 991,606 - -3.9 991,606 - -3.3 991,676 + CA265_RS04120 0.12 -1.6 991,739 + CA265_RS04120 0.17 -3.0 991,776 + CA265_RS04120 0.20 -1.8 991,776 + CA265_RS04120 0.20 -1.4 991,789 - CA265_RS04120 0.21 -0.9 991,808 - CA265_RS04120 0.22 -2.1 991,809 + CA265_RS04120 0.22 -0.7 991,810 - CA265_RS04120 0.23 -3.5 991,906 + CA265_RS04120 0.30 +0.0 991,907 - +0.1 991,962 + CA265_RS04120 0.35 -1.7 991,972 + CA265_RS04120 0.35 -0.6 991,987 + CA265_RS04120 0.37 -0.8 992,051 - CA265_RS04120 0.42 -1.6 992,113 + CA265_RS04120 0.47 -0.6 992,114 - CA265_RS04120 0.47 -2.1 992,141 + CA265_RS04120 0.49 -1.6 992,170 - CA265_RS04120 0.51 -1.3 992,170 - CA265_RS04120 0.51 -2.2 992,196 - CA265_RS04120 0.53 -1.1 992,229 - CA265_RS04120 0.56 -3.4 992,258 + CA265_RS04120 0.58 -4.1 992,259 - CA265_RS04120 0.58 -1.2 992,298 - CA265_RS04120 0.62 -1.8 992,385 + CA265_RS04120 0.69 -1.6 992,385 + CA265_RS04120 0.69 -2.1 992,432 + CA265_RS04120 0.72 -2.2 992,433 - CA265_RS04120 0.72 -1.6 992,505 - CA265_RS04120 0.78 -0.3 992,509 - CA265_RS04120 0.78 -2.4 992,526 + CA265_RS04120 0.80 -1.7 992,592 + CA265_RS04120 0.85 +0.7 992,623 - CA265_RS04120 0.88 -0.8 992,652 + CA265_RS04120 0.90 -0.8 992,681 + -4.7 992,724 + -0.4 992,724 + -0.1 992,725 - -0.6 992,731 - -1.1 992,771 + +1.4 992,793 + -1.2 992,793 + -0.1 992,854 - -0.1 992,866 + -0.8 992,919 - -2.0 992,992 + +0.7 993,021 - -1.4 993,023 + -0.5 993,147 + -1.2 993,152 + +0.2 993,170 + +0.5 993,251 + +0.1 993,252 - -0.4 993,353 + CA265_RS04125 0.16 -2.2 993,368 + CA265_RS04125 0.17 -1.1 993,373 + CA265_RS04125 0.18 -1.1 993,373 + CA265_RS04125 0.18 +1.7 993,373 + CA265_RS04125 0.18 +0.9 993,373 + CA265_RS04125 0.18 -0.6 993,396 - CA265_RS04125 0.20 -0.5 993,602 - CA265_RS04125 0.40 -1.4 993,607 - CA265_RS04125 0.41 -0.0 993,607 - CA265_RS04125 0.41 +0.4 993,612 - CA265_RS04125 0.41 -1.1 993,622 - CA265_RS04125 0.42 -1.3 993,623 + CA265_RS04125 0.42 -1.7 993,651 + CA265_RS04125 0.45 -1.1 993,671 + CA265_RS04125 0.47 -0.2 993,738 + CA265_RS04125 0.54 +0.7
Or see this region's nucleotide sequence