Experiment: L-Asparagine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS03710 and CA265_RS03715 are separated by 90 nucleotides CA265_RS03715 and CA265_RS03720 are separated by 16 nucleotides CA265_RS03720 and CA265_RS03725 are separated by 170 nucleotides
CA265_RS03710: CA265_RS03710 - dihydroorotase, at 882,721 to 883,977
_RS03710
CA265_RS03715: CA265_RS03715 - hypothetical protein, at 884,068 to 884,736
_RS03715
CA265_RS03720: CA265_RS03720 - DUF4199 domain-containing protein, at 884,753 to 885,322
_RS03720
CA265_RS03725: CA265_RS03725 - glycosyltransferase, at 885,493 to 886,440
_RS03725
Position (kb) 884
885 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 883.991 kb on - strand at 884.028 kb on - strand at 884.028 kb on - strand at 884.036 kb on - strand at 884.067 kb on + strand at 884.067 kb on + strand at 884.113 kb on + strand at 884.196 kb on + strand, within CA265_RS03715 at 884.270 kb on + strand, within CA265_RS03715 at 884.324 kb on + strand, within CA265_RS03715 at 884.325 kb on - strand, within CA265_RS03715 at 884.413 kb on - strand, within CA265_RS03715 at 884.468 kb on + strand, within CA265_RS03715 at 884.582 kb on + strand, within CA265_RS03715 at 884.680 kb on - strand at 884.712 kb on - strand at 884.739 kb on + strand at 884.865 kb on - strand, within CA265_RS03720 at 884.907 kb on + strand, within CA265_RS03720 at 884.913 kb on + strand, within CA265_RS03720 at 884.916 kb on + strand, within CA265_RS03720 at 884.920 kb on - strand, within CA265_RS03720 at 884.949 kb on + strand, within CA265_RS03720 at 884.950 kb on - strand, within CA265_RS03720 at 885.015 kb on + strand, within CA265_RS03720 at 885.134 kb on - strand, within CA265_RS03720 at 885.156 kb on + strand, within CA265_RS03720 at 885.157 kb on - strand, within CA265_RS03720 at 885.238 kb on - strand, within CA265_RS03720 at 885.238 kb on - strand, within CA265_RS03720 at 885.239 kb on + strand, within CA265_RS03720 at 885.294 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (N) remove 883,991 - -0.0 884,028 - -0.3 884,028 - -0.1 884,036 - -0.9 884,067 + +1.3 884,067 + -0.4 884,113 + +0.5 884,196 + CA265_RS03715 0.19 -1.8 884,270 + CA265_RS03715 0.30 -2.6 884,324 + CA265_RS03715 0.38 -1.4 884,325 - CA265_RS03715 0.38 -2.7 884,413 - CA265_RS03715 0.52 -0.7 884,468 + CA265_RS03715 0.60 -1.6 884,582 + CA265_RS03715 0.77 -0.6 884,680 - -2.8 884,712 - -2.1 884,739 + -0.2 884,865 - CA265_RS03720 0.20 +0.7 884,907 + CA265_RS03720 0.27 -2.3 884,913 + CA265_RS03720 0.28 +0.5 884,916 + CA265_RS03720 0.29 +0.9 884,920 - CA265_RS03720 0.29 -1.1 884,949 + CA265_RS03720 0.34 +0.7 884,950 - CA265_RS03720 0.35 -0.7 885,015 + CA265_RS03720 0.46 +1.6 885,134 - CA265_RS03720 0.67 +0.6 885,156 + CA265_RS03720 0.71 +0.6 885,157 - CA265_RS03720 0.71 +0.2 885,238 - CA265_RS03720 0.85 +0.8 885,238 - CA265_RS03720 0.85 +0.1 885,239 + CA265_RS03720 0.85 +0.5 885,294 + -2.6
Or see this region's nucleotide sequence