Experiment: L-Asparagine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS03625 and CA265_RS03630 are separated by 1 nucleotides CA265_RS03630 and CA265_RS03635 are separated by 106 nucleotides
CA265_RS03625: CA265_RS03625 - bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase, at 865,999 to 867,132
_RS03625
CA265_RS03630: CA265_RS03630 - histidinol-phosphate transaminase, at 867,134 to 868,174
_RS03630
CA265_RS03635: CA265_RS03635 - histidinol dehydrogenase, at 868,281 to 869,561
_RS03635
Position (kb) 867
868
869 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 866.134 kb on + strand, within CA265_RS03625 at 866.157 kb on + strand, within CA265_RS03625 at 866.178 kb on - strand, within CA265_RS03625 at 866.320 kb on + strand, within CA265_RS03625 at 866.333 kb on - strand, within CA265_RS03625 at 866.378 kb on - strand, within CA265_RS03625 at 866.398 kb on - strand, within CA265_RS03625 at 866.401 kb on + strand, within CA265_RS03625 at 866.401 kb on + strand, within CA265_RS03625 at 866.402 kb on - strand, within CA265_RS03625 at 866.420 kb on - strand, within CA265_RS03625 at 866.536 kb on - strand, within CA265_RS03625 at 866.601 kb on + strand, within CA265_RS03625 at 866.655 kb on + strand, within CA265_RS03625 at 866.780 kb on + strand, within CA265_RS03625 at 866.902 kb on - strand, within CA265_RS03625 at 866.993 kb on + strand, within CA265_RS03625 at 867.023 kb on + strand at 867.024 kb on - strand at 867.027 kb on - strand at 867.067 kb on + strand at 867.115 kb on - strand at 867.122 kb on - strand at 867.158 kb on + strand at 867.181 kb on + strand at 867.263 kb on - strand, within CA265_RS03630 at 867.363 kb on - strand, within CA265_RS03630 at 867.465 kb on + strand, within CA265_RS03630 at 867.465 kb on + strand, within CA265_RS03630 at 867.466 kb on - strand, within CA265_RS03630 at 867.567 kb on - strand, within CA265_RS03630 at 867.628 kb on + strand, within CA265_RS03630 at 867.633 kb on + strand, within CA265_RS03630 at 867.662 kb on - strand, within CA265_RS03630 at 867.686 kb on - strand, within CA265_RS03630 at 867.833 kb on + strand, within CA265_RS03630 at 867.834 kb on - strand, within CA265_RS03630 at 867.853 kb on - strand, within CA265_RS03630 at 867.853 kb on - strand, within CA265_RS03630 at 867.921 kb on - strand, within CA265_RS03630 at 867.981 kb on - strand, within CA265_RS03630 at 868.158 kb on - strand at 868.224 kb on - strand at 868.225 kb on + strand at 868.225 kb on + strand at 868.225 kb on + strand at 868.228 kb on - strand at 868.264 kb on + strand at 868.313 kb on + strand at 868.362 kb on + strand at 868.363 kb on - strand at 868.425 kb on - strand, within CA265_RS03635 at 868.469 kb on + strand, within CA265_RS03635 at 868.469 kb on + strand, within CA265_RS03635 at 868.470 kb on - strand, within CA265_RS03635 at 868.470 kb on - strand, within CA265_RS03635 at 868.545 kb on - strand, within CA265_RS03635 at 868.556 kb on + strand, within CA265_RS03635 at 868.578 kb on - strand, within CA265_RS03635 at 868.644 kb on + strand, within CA265_RS03635 at 868.766 kb on + strand, within CA265_RS03635 at 868.855 kb on - strand, within CA265_RS03635 at 868.877 kb on + strand, within CA265_RS03635 at 868.887 kb on + strand, within CA265_RS03635 at 868.888 kb on - strand, within CA265_RS03635 at 868.949 kb on + strand, within CA265_RS03635 at 868.949 kb on + strand, within CA265_RS03635 at 868.951 kb on + strand, within CA265_RS03635 at 868.952 kb on - strand, within CA265_RS03635 at 868.954 kb on - strand at 869.013 kb on + strand, within CA265_RS03635 at 869.013 kb on + strand, within CA265_RS03635 at 869.060 kb on - strand, within CA265_RS03635 at 869.161 kb on - strand, within CA265_RS03635
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (N) remove 866,134 + CA265_RS03625 0.12 -0.9 866,157 + CA265_RS03625 0.14 +1.1 866,178 - CA265_RS03625 0.16 -2.4 866,320 + CA265_RS03625 0.28 -2.1 866,333 - CA265_RS03625 0.29 -3.3 866,378 - CA265_RS03625 0.33 -3.6 866,398 - CA265_RS03625 0.35 -0.2 866,401 + CA265_RS03625 0.35 +0.7 866,401 + CA265_RS03625 0.35 -3.1 866,402 - CA265_RS03625 0.36 -1.1 866,420 - CA265_RS03625 0.37 -1.5 866,536 - CA265_RS03625 0.47 -0.4 866,601 + CA265_RS03625 0.53 -0.9 866,655 + CA265_RS03625 0.58 -2.1 866,780 + CA265_RS03625 0.69 -0.5 866,902 - CA265_RS03625 0.80 -1.1 866,993 + CA265_RS03625 0.88 -3.3 867,023 + -0.4 867,024 - -3.3 867,027 - -3.0 867,067 + -2.7 867,115 - -1.8 867,122 - -0.5 867,158 + -2.1 867,181 + -1.4 867,263 - CA265_RS03630 0.12 -1.7 867,363 - CA265_RS03630 0.22 -2.2 867,465 + CA265_RS03630 0.32 -2.7 867,465 + CA265_RS03630 0.32 -0.4 867,466 - CA265_RS03630 0.32 -1.4 867,567 - CA265_RS03630 0.42 +0.2 867,628 + CA265_RS03630 0.47 -1.9 867,633 + CA265_RS03630 0.48 -2.5 867,662 - CA265_RS03630 0.51 -2.7 867,686 - CA265_RS03630 0.53 -2.3 867,833 + CA265_RS03630 0.67 -0.2 867,834 - CA265_RS03630 0.67 -2.0 867,853 - CA265_RS03630 0.69 +0.5 867,853 - CA265_RS03630 0.69 -1.5 867,921 - CA265_RS03630 0.76 -2.7 867,981 - CA265_RS03630 0.81 -1.1 868,158 - -3.3 868,224 - +0.3 868,225 + -0.4 868,225 + -0.2 868,225 + -0.6 868,228 - -0.3 868,264 + -1.0 868,313 + -2.9 868,362 + -3.0 868,363 - -3.6 868,425 - CA265_RS03635 0.11 -3.9 868,469 + CA265_RS03635 0.15 -0.9 868,469 + CA265_RS03635 0.15 -1.9 868,470 - CA265_RS03635 0.15 -3.6 868,470 - CA265_RS03635 0.15 -2.1 868,545 - CA265_RS03635 0.21 -1.9 868,556 + CA265_RS03635 0.21 -0.9 868,578 - CA265_RS03635 0.23 -1.6 868,644 + CA265_RS03635 0.28 -2.2 868,766 + CA265_RS03635 0.38 -3.7 868,855 - CA265_RS03635 0.45 -1.9 868,877 + CA265_RS03635 0.47 -2.6 868,887 + CA265_RS03635 0.47 -3.3 868,888 - CA265_RS03635 0.47 -1.9 868,949 + CA265_RS03635 0.52 -3.1 868,949 + CA265_RS03635 0.52 -5.7 868,951 + CA265_RS03635 0.52 -2.6 868,952 - CA265_RS03635 0.52 -2.2 868,954 - -0.3 869,013 + CA265_RS03635 0.57 -0.3 869,013 + CA265_RS03635 0.57 -0.1 869,060 - CA265_RS03635 0.61 -2.2 869,161 - CA265_RS03635 0.69 -4.4
Or see this region's nucleotide sequence