Experiment: L-Asparagine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS02560 and CA265_RS02565 are separated by 67 nucleotides CA265_RS02565 and CA265_RS02570 are separated by 266 nucleotides CA265_RS02570 and CA265_RS02575 are separated by 227 nucleotides
CA265_RS02560: CA265_RS02560 - hypothetical protein, at 642,791 to 644,398
_RS02560
CA265_RS02565: CA265_RS02565 - hypothetical protein, at 644,466 to 645,068
_RS02565
CA265_RS02570: CA265_RS02570 - GNAT family N-acetyltransferase, at 645,335 to 645,817
_RS02570
CA265_RS02575: CA265_RS02575 - hypothetical protein, at 646,045 to 646,560
_RS02575
Position (kb) 644
645
646 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 643.486 kb on - strand, within CA265_RS02560 at 643.537 kb on - strand, within CA265_RS02560 at 643.543 kb on + strand, within CA265_RS02560 at 643.543 kb on + strand, within CA265_RS02560 at 643.543 kb on + strand, within CA265_RS02560 at 643.576 kb on + strand, within CA265_RS02560 at 643.577 kb on - strand, within CA265_RS02560 at 643.629 kb on + strand, within CA265_RS02560 at 643.634 kb on + strand, within CA265_RS02560 at 643.635 kb on - strand, within CA265_RS02560 at 643.650 kb on - strand, within CA265_RS02560 at 643.676 kb on - strand, within CA265_RS02560 at 643.712 kb on - strand, within CA265_RS02560 at 643.717 kb on + strand, within CA265_RS02560 at 643.725 kb on - strand, within CA265_RS02560 at 643.736 kb on + strand, within CA265_RS02560 at 643.737 kb on - strand, within CA265_RS02560 at 643.797 kb on + strand, within CA265_RS02560 at 643.816 kb on - strand, within CA265_RS02560 at 643.924 kb on - strand, within CA265_RS02560 at 643.940 kb on + strand, within CA265_RS02560 at 643.946 kb on - strand, within CA265_RS02560 at 644.014 kb on - strand, within CA265_RS02560 at 644.020 kb on - strand, within CA265_RS02560 at 644.036 kb on + strand, within CA265_RS02560 at 644.071 kb on - strand, within CA265_RS02560 at 644.074 kb on + strand, within CA265_RS02560 at 644.075 kb on - strand, within CA265_RS02560 at 644.075 kb on - strand, within CA265_RS02560 at 644.087 kb on + strand, within CA265_RS02560 at 644.087 kb on + strand, within CA265_RS02560 at 644.087 kb on + strand, within CA265_RS02560 at 644.114 kb on - strand, within CA265_RS02560 at 644.217 kb on - strand, within CA265_RS02560 at 644.228 kb on + strand, within CA265_RS02560 at 644.255 kb on - strand at 644.255 kb on - strand at 644.277 kb on + strand at 644.278 kb on - strand at 644.363 kb on - strand at 644.374 kb on + strand at 644.375 kb on - strand at 644.396 kb on + strand at 644.425 kb on + strand at 644.451 kb on + strand at 644.480 kb on + strand at 644.490 kb on - strand at 644.622 kb on - strand, within CA265_RS02565 at 644.622 kb on - strand, within CA265_RS02565 at 644.646 kb on - strand, within CA265_RS02565 at 644.652 kb on + strand, within CA265_RS02565 at 644.653 kb on - strand, within CA265_RS02565 at 644.757 kb on - strand, within CA265_RS02565 at 644.764 kb on - strand, within CA265_RS02565 at 644.952 kb on + strand, within CA265_RS02565 at 644.953 kb on - strand, within CA265_RS02565 at 645.012 kb on + strand at 645.048 kb on + strand at 645.049 kb on - strand at 645.049 kb on - strand at 645.051 kb on + strand at 645.052 kb on - strand at 645.090 kb on + strand at 645.091 kb on - strand at 645.092 kb on + strand at 645.092 kb on + strand at 645.092 kb on + strand at 645.093 kb on - strand at 645.118 kb on + strand at 645.118 kb on + strand at 645.260 kb on + strand at 645.260 kb on + strand at 645.277 kb on - strand at 645.316 kb on - strand at 645.370 kb on + strand at 645.374 kb on - strand at 645.442 kb on + strand, within CA265_RS02570 at 645.442 kb on + strand, within CA265_RS02570 at 645.546 kb on - strand, within CA265_RS02570 at 645.709 kb on + strand, within CA265_RS02570 at 645.710 kb on - strand, within CA265_RS02570 at 645.725 kb on - strand, within CA265_RS02570 at 645.791 kb on - strand at 645.832 kb on + strand at 645.940 kb on + strand at 645.940 kb on + strand at 646.010 kb on + strand at 646.057 kb on + strand at 646.062 kb on + strand at 646.062 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (N) remove 643,486 - CA265_RS02560 0.43 +0.2 643,537 - CA265_RS02560 0.46 -0.2 643,543 + CA265_RS02560 0.47 -0.0 643,543 + CA265_RS02560 0.47 -0.1 643,543 + CA265_RS02560 0.47 -0.0 643,576 + CA265_RS02560 0.49 -0.2 643,577 - CA265_RS02560 0.49 -1.9 643,629 + CA265_RS02560 0.52 +0.9 643,634 + CA265_RS02560 0.52 -0.9 643,635 - CA265_RS02560 0.52 -1.3 643,650 - CA265_RS02560 0.53 +0.8 643,676 - CA265_RS02560 0.55 -0.3 643,712 - CA265_RS02560 0.57 -1.8 643,717 + CA265_RS02560 0.58 -0.9 643,725 - CA265_RS02560 0.58 -0.6 643,736 + CA265_RS02560 0.59 +0.6 643,737 - CA265_RS02560 0.59 +0.2 643,797 + CA265_RS02560 0.63 -0.4 643,816 - CA265_RS02560 0.64 +1.8 643,924 - CA265_RS02560 0.70 -3.2 643,940 + CA265_RS02560 0.71 +1.0 643,946 - CA265_RS02560 0.72 -0.6 644,014 - CA265_RS02560 0.76 +0.2 644,020 - CA265_RS02560 0.76 +0.2 644,036 + CA265_RS02560 0.77 -0.6 644,071 - CA265_RS02560 0.80 +1.1 644,074 + CA265_RS02560 0.80 +0.5 644,075 - CA265_RS02560 0.80 -2.1 644,075 - CA265_RS02560 0.80 +0.4 644,087 + CA265_RS02560 0.81 +1.3 644,087 + CA265_RS02560 0.81 +1.0 644,087 + CA265_RS02560 0.81 -1.7 644,114 - CA265_RS02560 0.82 -0.0 644,217 - CA265_RS02560 0.89 -0.7 644,228 + CA265_RS02560 0.89 +0.0 644,255 - -0.2 644,255 - +0.8 644,277 + -0.2 644,278 - -0.6 644,363 - +0.9 644,374 + -0.4 644,375 - +0.8 644,396 + +1.1 644,425 + -0.1 644,451 + -0.1 644,480 + +0.0 644,490 - -2.5 644,622 - CA265_RS02565 0.26 +0.1 644,622 - CA265_RS02565 0.26 -0.2 644,646 - CA265_RS02565 0.30 -0.8 644,652 + CA265_RS02565 0.31 -0.8 644,653 - CA265_RS02565 0.31 -2.9 644,757 - CA265_RS02565 0.48 -2.3 644,764 - CA265_RS02565 0.49 -0.8 644,952 + CA265_RS02565 0.81 -1.0 644,953 - CA265_RS02565 0.81 +0.0 645,012 + -0.2 645,048 + +0.3 645,049 - -1.4 645,049 - +0.2 645,051 + +1.8 645,052 - +0.9 645,090 + +1.5 645,091 - +0.0 645,092 + -1.2 645,092 + +0.4 645,092 + +0.5 645,093 - -0.9 645,118 + -0.5 645,118 + +0.7 645,260 + +0.8 645,260 + -0.3 645,277 - -0.1 645,316 - -2.7 645,370 + +0.7 645,374 - +0.5 645,442 + CA265_RS02570 0.22 -0.1 645,442 + CA265_RS02570 0.22 -0.7 645,546 - CA265_RS02570 0.44 -0.6 645,709 + CA265_RS02570 0.77 -0.7 645,710 - CA265_RS02570 0.78 -0.4 645,725 - CA265_RS02570 0.81 -2.3 645,791 - +1.0 645,832 + -1.1 645,940 + -1.2 645,940 + -0.3 646,010 + +1.5 646,057 + -1.6 646,062 + -0.7 646,062 + +0.6
Or see this region's nucleotide sequence