Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS35885

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
11,129	+				-0.2
11,130	-				+0.5
11,154	-				-0.4
11,236	+		BPHYT_RS35880	0.24	-1.3
11,237	-		BPHYT_RS35880	0.25	-0.1
11,237	-		BPHYT_RS35880	0.25	-0.4
11,244	+		BPHYT_RS35880	0.27	-0.1
11,244	+		BPHYT_RS35880	0.27	-0.0
11,245	-		BPHYT_RS35880	0.27	+0.3
11,388	-		BPHYT_RS35880	0.65	+1.3
11,388	-		BPHYT_RS35880	0.65	+1.2
11,588	+				-0.7
11,634	+				-0.3
11,634	+				+0.1
11,635	-				+0.4
11,705	-				-0.6
11,805	-				+0.2
11,863	-				-0.6
12,150	-		BPHYT_RS35885	0.11	-0.8
12,244	+		BPHYT_RS35885	0.44	-0.9
12,319	-		BPHYT_RS35885	0.70	-1.6
12,463	+				-0.6
12,595	+				+0.1
12,597	+				+0.8
12,597	+				-0.2
12,597	+				+1.1
12,598	-				+0.2
12,616	-				+0.4
12,681	+				-0.4
12,685	+				-0.3
12,685	+				+0.5
12,685	+				-0.8
12,686	-				+0.9
12,686	-				+0.5
12,692	+				-0.5
12,756	-				+1.2
12,801	+				-1.6
12,802	-				-0.4
12,809	+				+0.2
12,889	+		BPHYT_RS35890	0.14	-0.4
12,889	+		BPHYT_RS35890	0.14	-0.4
12,890	-		BPHYT_RS35890	0.14	+0.7
12,974	-		BPHYT_RS35890	0.22	+0.3
13,105	-		BPHYT_RS35890	0.35	+0.5
13,136	+		BPHYT_RS35890	0.39	+0.3
13,136	+		BPHYT_RS35890	0.39	-1.1
13,137	-		BPHYT_RS35890	0.39	-0.9
13,187	+		BPHYT_RS35890	0.44	-0.5
13,282	+		BPHYT_RS35890	0.53	+0.1
13,369	+		BPHYT_RS35890	0.62	+0.5
13,370	-		BPHYT_RS35890	0.62	+0.0