Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34545

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
3,356,617	+				-0.6
3,356,617	+				+1.0
3,356,693	+				+0.1
3,357,030	+		BPHYT_RS34540	0.42	-0.2
3,357,175	+		BPHYT_RS34540	0.61	-0.3
3,357,176	-		BPHYT_RS34540	0.61	+0.9
3,357,277	-		BPHYT_RS34540	0.74	+0.5
3,357,283	-		BPHYT_RS34540	0.75	-1.0
3,357,403	+				+0.6
3,357,469	+				-0.6
3,357,551	+				-0.3
3,357,617	+				-0.0
3,357,645	-		BPHYT_RS34545	0.13	-0.7
3,357,730	-		BPHYT_RS34545	0.24	-0.6
3,358,500	+				+0.6
3,358,719	-				+0.4
3,358,719	-				-0.2
3,358,750	+				-0.2
3,358,911	+				+1.9
3,358,964	-				-0.0