Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS33400

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
3,076,393	-		BPHYT_RS33395	0.18	-0.4
3,076,393	-		BPHYT_RS33395	0.18	-0.5
3,076,818	+		BPHYT_RS33395	0.67	+0.0
3,076,979	-		BPHYT_RS33395	0.86	+1.0
3,077,119	+				-0.4
3,077,343	+		BPHYT_RS33400	0.17	+0.5
3,077,483	-		BPHYT_RS33400	0.30	+0.2
3,077,563	+		BPHYT_RS33400	0.38	-1.3
3,077,828	+		BPHYT_RS33400	0.64	+0.5
3,078,010	-		BPHYT_RS33400	0.81	+0.6
3,078,392	+				+0.2
3,078,427	-				-0.3
3,078,427	-				-0.7
3,078,529	+				+0.0
3,078,635	+		BPHYT_RS33405	0.12	-0.2
3,078,636	-		BPHYT_RS33405	0.12	-1.6
3,078,665	+		BPHYT_RS33405	0.15	+0.8
3,078,792	+		BPHYT_RS33405	0.27	+0.3
3,078,792	+		BPHYT_RS33405	0.27	-1.4
3,078,878	+		BPHYT_RS33405	0.36	-0.2
3,078,878	+		BPHYT_RS33405	0.36	-0.5
3,078,879	-		BPHYT_RS33405	0.36	-0.4
3,078,955	+		BPHYT_RS33405	0.43	+0.7
3,078,997	+		BPHYT_RS33405	0.47	-0.4
3,078,998	-		BPHYT_RS33405	0.47	-0.0
3,079,010	+		BPHYT_RS33405	0.49	-0.1
3,079,011	-		BPHYT_RS33405	0.49	-0.9
3,079,184	+		BPHYT_RS33405	0.65	-0.1