Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS31060
Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nickel (II) chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
2,522,595 | + | -0.0 | |||
2,523,259 | - | BPHYT_RS31055 | 0.73 | +0.0 | |
2,523,573 | - | -0.6 | |||
2,524,097 | - | BPHYT_RS31060 | 0.43 | -1.7 | |
2,524,230 | - | BPHYT_RS31060 | 0.54 | -1.0 | |
2,525,391 | + | BPHYT_RS31065 | 0.41 | +0.9 | |
2,525,394 | - | BPHYT_RS31065 | 0.41 | +0.8 | |
2,525,395 | - | BPHYT_RS31065 | 0.41 | +0.6 | |
2,525,684 | - | BPHYT_RS31065 | 0.63 | -0.4 |
Or see this region's nucleotide sequence