Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS29655

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
2,204,814	-		BPHYT_RS29650	0.30	-0.5
2,204,875	-		BPHYT_RS29650	0.38	-1.4
2,204,876	+		BPHYT_RS29650	0.38	+0.1
2,204,877	-		BPHYT_RS29650	0.38	-0.2
2,205,255	+		BPHYT_RS29650	0.87	+1.0
2,205,367	-				+0.3
2,205,493	+				-0.7
2,206,153	-		BPHYT_RS29655	0.68	-1.1
2,206,206	+		BPHYT_RS29655	0.74	-1.1
2,206,447	+				-0.3
2,206,447	+				+0.6
2,206,448	-				+0.5
2,206,506	-				+1.3
2,206,508	+				-0.1
2,206,509	-				+0.0
2,206,509	-				-0.3
2,206,667	+		BPHYT_RS29660	0.11	+0.1
2,206,732	+		BPHYT_RS29660	0.16	-0.2
2,206,815	-		BPHYT_RS29660	0.22	+0.4
2,206,815	-		BPHYT_RS29660	0.22	-0.7
2,206,858	-		BPHYT_RS29660	0.25	-0.0
2,207,222	-		BPHYT_RS29660	0.51	-0.0
2,207,424	-		BPHYT_RS29660	0.65	+0.0