Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS26305 and BPHYT_RS26310 are separated by 234 nucleotides BPHYT_RS26310 and BPHYT_RS26315 are separated by 135 nucleotides BPHYT_RS26315 and BPHYT_RS26320 are separated by 4 nucleotides
BPHYT_RS26305: BPHYT_RS26305 - exonuclease, at 1,473,029 to 1,474,177
_RS26305
BPHYT_RS26310: BPHYT_RS26310 - ribonuclease R, at 1,474,412 to 1,475,314
_RS26310
BPHYT_RS26315: BPHYT_RS26315 - sigma factor sigB regulation protein rsbQ, at 1,475,450 to 1,476,253
_RS26315
BPHYT_RS26320: BPHYT_RS26320 - ATPase, at 1,476,258 to 1,478,588
_RS26320
Position (kb) 1474
1475
1476 Strain fitness (log2 ratio) -2
-1
0
1 at 1473.674 kb on - strand, within BPHYT_RS26305 at 1474.011 kb on + strand, within BPHYT_RS26305 at 1474.092 kb on + strand at 1474.114 kb on - strand at 1474.171 kb on + strand at 1474.171 kb on + strand at 1474.240 kb on + strand at 1474.337 kb on - strand at 1474.440 kb on + strand at 1474.440 kb on + strand at 1474.442 kb on + strand at 1474.442 kb on + strand at 1474.442 kb on + strand at 1474.533 kb on - strand, within BPHYT_RS26310 at 1474.536 kb on - strand, within BPHYT_RS26310 at 1475.256 kb on - strand at 1475.373 kb on - strand at 1475.576 kb on + strand, within BPHYT_RS26315 at 1475.816 kb on + strand, within BPHYT_RS26315 at 1475.834 kb on + strand, within BPHYT_RS26315 at 1475.895 kb on - strand, within BPHYT_RS26315 at 1475.895 kb on - strand, within BPHYT_RS26315 at 1476.252 kb on - strand at 1476.252 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 1 mM remove 1,473,674 - BPHYT_RS26305 0.56 +0.1 1,474,011 + BPHYT_RS26305 0.85 -0.2 1,474,092 + -0.3 1,474,114 - -0.1 1,474,171 + -1.2 1,474,171 + -0.4 1,474,240 + -0.0 1,474,337 - -1.4 1,474,440 + -0.4 1,474,440 + -0.4 1,474,442 + -1.1 1,474,442 + -0.1 1,474,442 + -0.7 1,474,533 - BPHYT_RS26310 0.13 -1.2 1,474,536 - BPHYT_RS26310 0.14 -0.2 1,475,256 - +0.4 1,475,373 - -0.4 1,475,576 + BPHYT_RS26315 0.16 +0.1 1,475,816 + BPHYT_RS26315 0.46 -2.6 1,475,834 + BPHYT_RS26315 0.48 +0.6 1,475,895 - BPHYT_RS26315 0.55 +0.0 1,475,895 - BPHYT_RS26315 0.55 +1.3 1,476,252 - +0.6 1,476,252 - +0.4
Or see this region's nucleotide sequence