Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS26010 and BPHYT_RS26015 are separated by 157 nucleotides BPHYT_RS26015 and BPHYT_RS26020 are separated by 35 nucleotides BPHYT_RS26020 and BPHYT_RS26025 are separated by 35 nucleotides
BPHYT_RS26010: BPHYT_RS26010 - ABC transporter substrate-binding protein, at 1,411,688 to 1,412,698
_RS26010
BPHYT_RS26015: BPHYT_RS26015 - rod shape-determining protein MreB, at 1,412,856 to 1,413,899
_RS26015
BPHYT_RS26020: BPHYT_RS26020 - GntR family transcriptional regulator, at 1,413,935 to 1,414,693
_RS26020
BPHYT_RS26025: BPHYT_RS26025 - hypothetical protein, at 1,414,729 to 1,415,124
_RS26025
Position (kb) 1412
1413
1414 Strain fitness (log2 ratio) -1
0
1 at 1411.907 kb on + strand, within BPHYT_RS26010 at 1412.429 kb on + strand, within BPHYT_RS26010 at 1412.430 kb on - strand, within BPHYT_RS26010 at 1412.639 kb on + strand at 1412.640 kb on - strand at 1413.475 kb on - strand, within BPHYT_RS26015 at 1413.475 kb on - strand, within BPHYT_RS26015 at 1413.891 kb on + strand at 1414.372 kb on + strand, within BPHYT_RS26020
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 1 mM remove 1,411,907 + BPHYT_RS26010 0.22 -0.8 1,412,429 + BPHYT_RS26010 0.73 -0.5 1,412,430 - BPHYT_RS26010 0.73 +0.1 1,412,639 + -0.3 1,412,640 - -0.1 1,413,475 - BPHYT_RS26015 0.59 -0.9 1,413,475 - BPHYT_RS26015 0.59 -0.3 1,413,891 + +0.4 1,414,372 + BPHYT_RS26020 0.58 -1.2
Or see this region's nucleotide sequence