Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS24635 and BPHYT_RS24640 are separated by 12 nucleotides BPHYT_RS24640 and BPHYT_RS24645 are separated by 78 nucleotides BPHYT_RS24645 and BPHYT_RS24650 are separated by 2 nucleotides
BPHYT_RS24635: BPHYT_RS24635 - aldehyde dehydrogenase, at 1,096,405 to 1,098,657
_RS24635
BPHYT_RS24640: BPHYT_RS24640 - alcohol dehydrogenase, at 1,098,670 to 1,099,950
_RS24640
BPHYT_RS24645: BPHYT_RS24645 - amino acid ABC transporter permease, at 1,100,029 to 1,100,685
_RS24645
BPHYT_RS24650: BPHYT_RS24650 - polar amino acid ABC transporter permease, at 1,100,688 to 1,101,434
_RS24650
Position (kb)
1098
1099
1100 Strain fitness (log2 ratio)
-1
0
1 at 1097.803 kb on + strand, within BPHYT_RS24635 at 1097.804 kb on - strand, within BPHYT_RS24635 at 1097.812 kb on + strand, within BPHYT_RS24635 at 1097.816 kb on - strand, within BPHYT_RS24635 at 1097.819 kb on - strand, within BPHYT_RS24635 at 1097.999 kb on - strand, within BPHYT_RS24635 at 1097.999 kb on - strand, within BPHYT_RS24635 at 1098.416 kb on - strand, within BPHYT_RS24635 at 1098.513 kb on + strand at 1098.778 kb on + strand at 1098.878 kb on - strand, within BPHYT_RS24640 at 1098.878 kb on - strand, within BPHYT_RS24640 at 1098.924 kb on + strand, within BPHYT_RS24640 at 1099.051 kb on + strand, within BPHYT_RS24640 at 1099.255 kb on - strand, within BPHYT_RS24640 at 1099.495 kb on - strand, within BPHYT_RS24640 at 1099.519 kb on + strand, within BPHYT_RS24640 at 1099.520 kb on - strand, within BPHYT_RS24640 at 1099.570 kb on + strand, within BPHYT_RS24640 at 1099.634 kb on - strand, within BPHYT_RS24640 at 1099.635 kb on + strand, within BPHYT_RS24640 at 1100.387 kb on + strand, within BPHYT_RS24645 at 1100.388 kb on - strand, within BPHYT_RS24645 at 1100.519 kb on + strand, within BPHYT_RS24645 at 1100.520 kb on - strand, within BPHYT_RS24645 at 1100.520 kb on - strand, within BPHYT_RS24645 at 1100.532 kb on + strand, within BPHYT_RS24645 at 1100.744 kb on + strand at 1100.843 kb on - strand, within BPHYT_RS24650 at 1100.863 kb on + strand, within BPHYT_RS24650 at 1100.864 kb on - strand, within BPHYT_RS24650 at 1100.915 kb on + strand, within BPHYT_RS24650 at 1100.915 kb on + strand, within BPHYT_RS24650 at 1100.915 kb on + strand, within BPHYT_RS24650
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 1 mM remove 1,097,803 + BPHYT_RS24635 0.62 -0.7 1,097,804 - BPHYT_RS24635 0.62 -0.4 1,097,812 + BPHYT_RS24635 0.62 +0.1 1,097,816 - BPHYT_RS24635 0.63 +0.3 1,097,819 - BPHYT_RS24635 0.63 -0.3 1,097,999 - BPHYT_RS24635 0.71 +0.3 1,097,999 - BPHYT_RS24635 0.71 -1.2 1,098,416 - BPHYT_RS24635 0.89 +0.3 1,098,513 + -0.1 1,098,778 + +0.4 1,098,878 - BPHYT_RS24640 0.16 +1.6 1,098,878 - BPHYT_RS24640 0.16 +0.4 1,098,924 + BPHYT_RS24640 0.20 +0.5 1,099,051 + BPHYT_RS24640 0.30 -0.6 1,099,255 - BPHYT_RS24640 0.46 -0.5 1,099,495 - BPHYT_RS24640 0.64 +0.8 1,099,519 + BPHYT_RS24640 0.66 +0.1 1,099,520 - BPHYT_RS24640 0.66 -0.1 1,099,570 + BPHYT_RS24640 0.70 -0.3 1,099,634 - BPHYT_RS24640 0.75 +0.7 1,099,635 + BPHYT_RS24640 0.75 +0.8 1,100,387 + BPHYT_RS24645 0.54 -0.6 1,100,388 - BPHYT_RS24645 0.55 +0.4 1,100,519 + BPHYT_RS24645 0.75 +0.1 1,100,520 - BPHYT_RS24645 0.75 +0.4 1,100,520 - BPHYT_RS24645 0.75 -0.2 1,100,532 + BPHYT_RS24645 0.77 -0.1 1,100,744 + +0.6 1,100,843 - BPHYT_RS24650 0.21 +0.1 1,100,863 + BPHYT_RS24650 0.23 -0.1 1,100,864 - BPHYT_RS24650 0.24 -0.2 1,100,915 + BPHYT_RS24650 0.30 -1.6 1,100,915 + BPHYT_RS24650 0.30 +0.2 1,100,915 + BPHYT_RS24650 0.30 +0.1
Or see this region's nucleotide sequence