Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS24605

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
1,089,633	+				-0.3
1,089,919	+		BPHYT_RS24600	0.37	-0.4
1,089,920	-		BPHYT_RS24600	0.38	+0.1
1,089,931	+		BPHYT_RS24600	0.39	-0.0
1,090,177	+		BPHYT_RS24600	0.72	+3.1
1,090,434	-				+0.7
1,090,434	-				+0.6
1,090,701	+		BPHYT_RS24605	0.26	-1.3
1,090,702	-		BPHYT_RS24605	0.26	-0.4
1,090,804	-		BPHYT_RS24605	0.34	-0.8
1,090,804	-		BPHYT_RS24605	0.34	-0.3
1,090,809	+		BPHYT_RS24605	0.34	-0.5
1,090,972	-		BPHYT_RS24605	0.47	-0.1
1,091,010	-		BPHYT_RS24605	0.50	+0.2
1,091,194	-		BPHYT_RS24605	0.65	+0.2
1,091,343	+		BPHYT_RS24605	0.76	-0.2
1,091,344	-		BPHYT_RS24605	0.77	+0.5
1,091,572	-				+0.0
1,091,572	-				-0.2
1,091,651	-				+1.0
1,091,651	-				+0.8
1,091,690	+				-0.8
1,091,947	-		BPHYT_RS24610	0.38	+0.4
1,091,947	-		BPHYT_RS24610	0.38	-0.2
1,091,947	-		BPHYT_RS24610	0.38	+0.3
1,091,948	+		BPHYT_RS24610	0.38	-0.2
1,091,948	+		BPHYT_RS24610	0.38	+0.5
1,091,949	-		BPHYT_RS24610	0.39	+0.2
1,091,949	-		BPHYT_RS24610	0.39	-0.1
1,092,135	-		BPHYT_RS24610	0.84	-0.5
1,092,318	-				+0.3
1,092,356	-				+0.1
1,092,356	-				+0.1
1,092,518	-				+0.3
1,092,534	+				-0.5
1,092,556	+				+0.2
1,092,557	-				-0.1
1,092,568	+				-0.6