Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS20290

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
110,784	-		BPHYT_RS20285	0.62	+0.0
110,942	+		BPHYT_RS20285	0.73	-0.0
111,826	+		BPHYT_RS20290	0.21	-0.3
111,829	+		BPHYT_RS20290	0.21	-1.3
112,368	-		BPHYT_RS20290	0.78	-1.4
112,621	+				-2.1
112,621	+				-1.6
112,625	-				-2.7
112,792	+		BPHYT_RS20295	0.10	-2.0
112,793	-		BPHYT_RS20295	0.10	-1.4
112,793	-		BPHYT_RS20295	0.10	-1.5
112,879	+		BPHYT_RS20295	0.14	-1.7
113,051	-		BPHYT_RS20295	0.22	-1.1
113,051	-		BPHYT_RS20295	0.22	-2.1
113,056	+		BPHYT_RS20295	0.22	-1.8
113,164	+		BPHYT_RS20295	0.27	-1.8
113,215	+		BPHYT_RS20295	0.30	-1.8
113,216	-		BPHYT_RS20295	0.30	-1.3
113,216	-		BPHYT_RS20295	0.30	-2.7
113,216	-		BPHYT_RS20295	0.30	-2.2
113,225	-		BPHYT_RS20295	0.30	-1.6
113,291	-		BPHYT_RS20295	0.33	-1.4
113,321	-		BPHYT_RS20295	0.35	-1.3
113,343	-		BPHYT_RS20295	0.36	-1.9
113,379	-		BPHYT_RS20295	0.37	-1.5
113,379	-		BPHYT_RS20295	0.37	-1.5
113,379	-		BPHYT_RS20295	0.37	-1.1
113,379	-		BPHYT_RS20295	0.37	-0.7
113,509	+		BPHYT_RS20295	0.43	-1.3
113,510	-		BPHYT_RS20295	0.43	-2.1
113,539	+		BPHYT_RS20295	0.45	-2.4