Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS20275

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
106,025	+		BPHYT_RS20270	0.62	+1.7
106,387	+		BPHYT_RS20270	0.88	+1.2
106,548	-				+0.0
106,548	-				-0.3
106,574	+				+1.9
106,576	+				+0.4
106,657	+				-0.3
106,843	-		BPHYT_RS20275	0.11	+0.2
106,960	+		BPHYT_RS20275	0.16	-0.5
106,981	+		BPHYT_RS20275	0.17	+0.4
107,212	-		BPHYT_RS20275	0.27	-0.2
107,435	-		BPHYT_RS20275	0.37	-0.8
107,527	+		BPHYT_RS20275	0.42	-0.4
107,528	-		BPHYT_RS20275	0.42	+0.1
107,593	+		BPHYT_RS20275	0.45	+0.0
107,593	+		BPHYT_RS20275	0.45	+0.2
107,732	-		BPHYT_RS20275	0.51	+0.2
107,743	+		BPHYT_RS20275	0.51	-0.1
107,805	+		BPHYT_RS20275	0.54	-0.1
107,828	-		BPHYT_RS20275	0.55	+0.3
107,844	+		BPHYT_RS20275	0.56	+1.4
107,887	+		BPHYT_RS20275	0.58	-0.3
107,888	-		BPHYT_RS20275	0.58	+0.8
107,888	-		BPHYT_RS20275	0.58	-0.8
107,888	-		BPHYT_RS20275	0.58	+0.1
107,986	+		BPHYT_RS20275	0.62	-0.7
108,133	+		BPHYT_RS20275	0.69	+0.4
108,457	+		BPHYT_RS20275	0.83	-0.1
108,458	-		BPHYT_RS20275	0.83	-0.5
108,463	+		BPHYT_RS20275	0.83	-1.3
108,667	+				+0.1
108,667	+				-0.6
108,777	+				-0.3
108,777	+				-0.5
108,809	+				-0.5
108,833	-				-0.0
108,857	+				+0.6
108,857	+				-0.1
108,857	+				+0.6
108,858	-				-0.2
108,858	-				-0.9
108,891	-				-0.3
108,944	+				+0.2
108,944	+				+1.9
108,962	+		BPHYT_RS20280	0.11	-0.1
109,407	-		BPHYT_RS20280	0.64	-1.0
109,512	-		BPHYT_RS20280	0.76	+0.7
109,781	-				-0.2
109,784	+				-0.7