Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS17345

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
3,931,717	+		BPHYT_RS17340	0.59	-0.9
3,931,718	-		BPHYT_RS17340	0.59	+1.3
3,931,753	+		BPHYT_RS17340	0.62	-0.9
3,931,753	+		BPHYT_RS17340	0.62	+0.1
3,931,754	-		BPHYT_RS17340	0.62	-1.1
3,931,989	-		BPHYT_RS17340	0.75	-1.1
3,932,155	+		BPHYT_RS17340	0.85	-0.2
3,932,413	+				-0.2
3,932,413	+				+0.2
3,932,413	+				+0.1
3,932,414	-				+0.4
3,932,414	-				+0.1
3,932,436	+				+0.3
3,932,476	+				-0.1
3,932,476	+				-0.2
3,932,477	-				+0.3
3,932,477	-				+0.1
3,932,677	+		BPHYT_RS17345	0.12	-1.3
3,932,677	+		BPHYT_RS17345	0.12	-0.5
3,932,691	+		BPHYT_RS17345	0.13	-0.1
3,932,691	+		BPHYT_RS17345	0.13	-1.2
3,932,691	+		BPHYT_RS17345	0.13	-0.4
3,932,691	+		BPHYT_RS17345	0.13	+0.2
3,932,924	+		BPHYT_RS17345	0.33	-0.1
3,932,924	+		BPHYT_RS17345	0.33	+0.4
3,932,924	+		BPHYT_RS17345	0.33	-0.2
3,932,948	+		BPHYT_RS17345	0.35	-0.2
3,932,949	-		BPHYT_RS17345	0.35	-3.0
3,932,952	+		BPHYT_RS17345	0.35	+0.4
3,932,953	-		BPHYT_RS17345	0.35	-1.8
3,933,004	-		BPHYT_RS17345	0.39	+0.0
3,933,242	+		BPHYT_RS17345	0.59	+0.7
3,933,534	-		BPHYT_RS17345	0.83	-0.4
3,933,735	+				-0.5
3,933,791	+				-0.3
3,933,791	+				-0.4
3,933,791	+				-1.2
3,933,791	+				-0.1
3,933,792	-				-0.1
3,933,846	+				-0.2
3,934,517	+				-0.7
3,934,652	-		BPHYT_RS17355	0.16	+0.3
3,934,700	+		BPHYT_RS17355	0.26	+0.1