Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS16165
Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nickel (II) chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
3,666,393 | + | BPHYT_RS16160 | 0.41 | +0.2 | |
3,666,687 | + | BPHYT_RS16160 | 0.62 | -0.0 | |
3,666,709 | - | BPHYT_RS16160 | 0.64 | -0.4 | |
3,667,104 | - | -0.7 | |||
3,667,192 | - | +0.5 | |||
3,667,224 | - | -0.1 | |||
3,667,235 | - | +0.2 | |||
3,667,327 | + | +0.2 | |||
3,667,328 | - | -0.5 | |||
3,667,374 | + | +0.0 | |||
3,667,375 | - | -0.4 | |||
3,667,375 | - | +0.0 | |||
3,667,437 | - | +0.1 | |||
3,669,052 | - | -0.5 | |||
3,669,052 | - | +0.3 |
Or see this region's nucleotide sequence