Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS15965

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
3,622,601	-		BPHYT_RS15960	0.28	+0.6
3,622,640	+		BPHYT_RS15960	0.31	+0.6
3,622,641	-		BPHYT_RS15960	0.31	+0.4
3,622,696	+		BPHYT_RS15960	0.36	+0.7
3,622,877	+		BPHYT_RS15960	0.51	+0.7
3,622,877	+		BPHYT_RS15960	0.51	+0.7
3,622,877	+		BPHYT_RS15960	0.51	+1.2
3,622,877	+		BPHYT_RS15960	0.51	+0.7
3,622,877	+		BPHYT_RS15960	0.51	-0.1
3,622,878	-		BPHYT_RS15960	0.51	+0.9
3,622,878	-		BPHYT_RS15960	0.51	+1.1
3,622,951	-		BPHYT_RS15960	0.56	+0.6
3,622,957	+		BPHYT_RS15960	0.57	+1.4
3,623,029	+		BPHYT_RS15960	0.63	+1.2
3,623,048	-		BPHYT_RS15960	0.64	-0.3
3,623,176	+		BPHYT_RS15960	0.75	+0.9
3,623,176	+		BPHYT_RS15960	0.75	+1.8
3,623,192	+		BPHYT_RS15960	0.76	+1.2
3,623,260	+		BPHYT_RS15960	0.81	+1.2
3,623,260	+		BPHYT_RS15960	0.81	+0.5