Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS14210

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
3,247,121	+		BPHYT_RS14205	0.50	-0.0
3,247,199	-		BPHYT_RS14205	0.55	-0.3
3,247,249	+		BPHYT_RS14205	0.58	-0.5
3,247,253	+		BPHYT_RS14205	0.58	-0.8
3,247,352	+		BPHYT_RS14205	0.64	-0.6
3,247,353	-		BPHYT_RS14205	0.64	-0.0
3,247,354	+		BPHYT_RS14205	0.64	+0.2
3,247,480	+		BPHYT_RS14205	0.71	-0.1
3,247,480	+		BPHYT_RS14205	0.71	-0.4
3,247,481	-		BPHYT_RS14205	0.71	+0.4
3,247,627	+		BPHYT_RS14205	0.80	-0.4
3,247,627	+		BPHYT_RS14205	0.80	+0.4
3,247,634	-		BPHYT_RS14205	0.80	+1.1
3,247,666	+		BPHYT_RS14205	0.82	-0.0
3,247,684	+		BPHYT_RS14205	0.83	-1.4
3,247,684	+		BPHYT_RS14205	0.83	-0.1
3,247,852	-				-1.2
3,247,949	+				-0.2
3,247,949	+				+0.0
3,247,950	-				+0.8
3,247,950	-				+0.1
3,247,956	-				+0.5
3,247,956	-				+0.1
3,247,956	-				+0.4
3,248,008	+				-0.2
3,248,103	-				+0.2
3,248,103	-				-0.7
3,248,157	-				-0.2
3,248,157	-				-0.8
3,248,387	-		BPHYT_RS14210	0.34	-0.9
3,248,387	-		BPHYT_RS14210	0.34	-0.5
3,248,758	-		BPHYT_RS14210	0.80	-0.4
3,248,794	+		BPHYT_RS14210	0.85	-1.4
3,248,795	-		BPHYT_RS14210	0.85	-0.5
3,248,795	-		BPHYT_RS14210	0.85	-1.5
3,248,866	+				-1.2
3,248,867	-				-0.8
3,248,867	-				-0.8
3,248,867	-				-0.3
3,248,867	-				-0.8
3,248,892	+				-2.0
3,248,897	-				-0.6
3,248,932	-				-1.1
3,249,774	+				+0.4