Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS07815

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
1,782,011	-				-0.5
1,782,248	-				+0.8
1,782,377	+				+0.3
1,782,378	-				-0.1
1,782,557	-				-0.0
1,782,582	-				+0.2
1,782,651	+				+0.1
1,782,651	+				+0.5
1,782,657	-				+0.2
1,782,784	+		BPHYT_RS07815	0.27	-0.2
1,782,810	-		BPHYT_RS07815	0.34	-1.9
1,782,812	-		BPHYT_RS07815	0.34	-2.1
1,782,956	+		BPHYT_RS07815	0.72	+0.6
1,783,126	+				-0.2
1,783,239	+		BPHYT_RS07820	0.13	+1.2
1,783,621	+		BPHYT_RS07820	0.43	+0.1
1,783,713	+		BPHYT_RS07820	0.50	+0.2
1,783,713	+		BPHYT_RS07820	0.50	-0.2
1,783,986	+		BPHYT_RS07820	0.71	-0.3
1,784,061	-		BPHYT_RS07820	0.77	+0.2