Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS06990

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
1,579,549	-		BPHYT_RS06985	0.80	-0.3
1,579,749	+				-0.7
1,579,749	+				+1.3
1,579,773	+				-3.2
1,579,788	+				-1.2
1,579,789	-				-0.1
1,579,791	+				+1.6
1,579,791	+				-0.4
1,579,792	-				-0.2
1,579,800	+				+0.6
1,579,801	-				-0.4
1,579,859	+				-0.2
1,579,859	+				+0.1
1,579,860	-				+0.4
1,579,860	-				-0.2
1,579,860	-				-0.6
1,580,081	+		BPHYT_RS06990	0.30	-2.5
1,580,395	+		BPHYT_RS06990	0.85	-1.0
1,580,425	+				-0.8
1,580,564	-				-1.4
1,580,613	+				-0.7
1,580,711	-				-1.6
1,580,711	-				-0.1
1,580,951	-		BPHYT_RS06995	0.14	+0.1
1,581,173	-		BPHYT_RS06995	0.40	-2.0
1,581,229	+		BPHYT_RS06995	0.46	-0.2
1,581,229	+		BPHYT_RS06995	0.46	+2.2
1,581,229	+		BPHYT_RS06995	0.46	+0.2