Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS06910

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
1,565,543	+		BPHYT_RS06905	0.71	+0.2
1,565,777	+		BPHYT_RS06905	0.82	+0.2
1,565,778	-		BPHYT_RS06905	0.82	-0.5
1,565,921	+		BPHYT_RS06905	0.89	-0.5
1,565,922	-		BPHYT_RS06905	0.89	+0.3
1,566,251	+				-0.1
1,566,251	+				+0.4
1,566,263	-				+0.3
1,566,325	-				-3.0
1,566,357	-				-1.7
1,566,614	+		BPHYT_RS06910	0.23	-0.4
1,566,614	+		BPHYT_RS06910	0.23	-2.2
1,566,762	-		BPHYT_RS06910	0.50	-2.1
1,566,875	+		BPHYT_RS06910	0.71	-2.0
1,566,875	+		BPHYT_RS06910	0.71	-2.4
1,566,876	-		BPHYT_RS06910	0.71	-1.0
1,566,989	+				-1.8
1,567,059	-				-2.9
1,567,345	+		BPHYT_RS06915	0.44	-2.8
1,567,345	+		BPHYT_RS06915	0.44	-1.7
1,567,529	+				+0.7
1,567,530	-				-2.7
1,567,614	+				-2.3
1,567,615	-				-1.8
1,567,716	-		BPHYT_RS06920	0.14	-2.0
1,567,968	+		BPHYT_RS06920	0.43	-3.1
1,567,968	+		BPHYT_RS06920	0.43	-2.3
1,568,015	+		BPHYT_RS06920	0.49	-2.4