Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS05745 and BPHYT_RS05750 are separated by 193 nucleotides BPHYT_RS05750 and BPHYT_RS05755 overlap by 53 nucleotides BPHYT_RS05755 and BPHYT_RS05760 are separated by 2 nucleotides BPHYT_RS05760 and BPHYT_RS05765 are separated by 1 nucleotides
BPHYT_RS05745: BPHYT_RS05745 - hypothetical protein, at 1,307,719 to 1,308,474
_RS05745
BPHYT_RS05750: BPHYT_RS05750 - hypothetical protein, at 1,308,668 to 1,309,315
_RS05750
BPHYT_RS05755: BPHYT_RS05755 - terminase, at 1,309,263 to 1,311,317
_RS05755
BPHYT_RS05760: BPHYT_RS05760 - hypothetical protein, at 1,311,320 to 1,311,523
_RS05760
BPHYT_RS05765: BPHYT_RS05765 - portal protein, at 1,311,525 to 1,312,994
_RS05765
Position (kb) 1309
1310
1311
1312 Strain fitness (log2 ratio) -2
-1
0
1 at 1308.365 kb on - strand, within BPHYT_RS05745 at 1308.385 kb on + strand, within BPHYT_RS05745 at 1308.386 kb on - strand, within BPHYT_RS05745 at 1308.386 kb on - strand, within BPHYT_RS05745 at 1308.386 kb on - strand, within BPHYT_RS05745 at 1309.816 kb on - strand, within BPHYT_RS05755 at 1309.842 kb on + strand, within BPHYT_RS05755 at 1309.901 kb on + strand at 1309.902 kb on - strand at 1309.902 kb on - strand, within BPHYT_RS05755 at 1309.977 kb on + strand, within BPHYT_RS05755 at 1310.094 kb on + strand, within BPHYT_RS05755 at 1310.094 kb on + strand, within BPHYT_RS05755 at 1310.094 kb on + strand, within BPHYT_RS05755 at 1310.098 kb on - strand, within BPHYT_RS05755 at 1310.524 kb on + strand, within BPHYT_RS05755 at 1310.524 kb on + strand, within BPHYT_RS05755 at 1310.525 kb on - strand, within BPHYT_RS05755 at 1310.554 kb on + strand, within BPHYT_RS05755 at 1310.668 kb on - strand, within BPHYT_RS05755 at 1310.668 kb on - strand, within BPHYT_RS05755 at 1310.668 kb on - strand, within BPHYT_RS05755 at 1310.949 kb on + strand, within BPHYT_RS05755 at 1311.316 kb on - strand at 1311.316 kb on - strand at 1311.319 kb on + strand at 1311.320 kb on - strand at 1311.329 kb on - strand at 1311.410 kb on + strand, within BPHYT_RS05760 at 1311.510 kb on - strand at 1311.695 kb on - strand, within BPHYT_RS05765 at 1311.912 kb on + strand, within BPHYT_RS05765 at 1311.912 kb on + strand, within BPHYT_RS05765 at 1311.912 kb on + strand, within BPHYT_RS05765 at 1312.281 kb on + strand, within BPHYT_RS05765
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 1 mM remove 1,308,365 - BPHYT_RS05745 0.85 +0.4 1,308,385 + BPHYT_RS05745 0.88 -0.3 1,308,386 - BPHYT_RS05745 0.88 -0.0 1,308,386 - BPHYT_RS05745 0.88 +0.4 1,308,386 - BPHYT_RS05745 0.88 -0.3 1,309,816 - BPHYT_RS05755 0.27 -0.7 1,309,842 + BPHYT_RS05755 0.28 -0.3 1,309,901 + -1.1 1,309,902 - -0.5 1,309,902 - BPHYT_RS05755 0.31 +0.4 1,309,977 + BPHYT_RS05755 0.35 +0.3 1,310,094 + BPHYT_RS05755 0.40 +0.2 1,310,094 + BPHYT_RS05755 0.40 +0.2 1,310,094 + BPHYT_RS05755 0.40 +0.5 1,310,098 - BPHYT_RS05755 0.41 +0.4 1,310,524 + BPHYT_RS05755 0.61 -0.6 1,310,524 + BPHYT_RS05755 0.61 -0.1 1,310,525 - BPHYT_RS05755 0.61 -0.0 1,310,554 + BPHYT_RS05755 0.63 -0.1 1,310,668 - BPHYT_RS05755 0.68 +0.8 1,310,668 - BPHYT_RS05755 0.68 +0.4 1,310,668 - BPHYT_RS05755 0.68 -0.3 1,310,949 + BPHYT_RS05755 0.82 -0.1 1,311,316 - -2.0 1,311,316 - -0.4 1,311,319 + +0.4 1,311,320 - -0.1 1,311,329 - +0.3 1,311,410 + BPHYT_RS05760 0.44 +1.1 1,311,510 - +0.0 1,311,695 - BPHYT_RS05765 0.12 -0.1 1,311,912 + BPHYT_RS05765 0.26 -0.2 1,311,912 + BPHYT_RS05765 0.26 -0.3 1,311,912 + BPHYT_RS05765 0.26 +0.2 1,312,281 + BPHYT_RS05765 0.51 -0.1
Or see this region's nucleotide sequence