Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS04810

Experiment: Nickel (II) chloride 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nickel (II) chloride 1 mM
1,108,210	+				-2.3
1,108,210	+				-1.4
1,108,211	-				-2.4
1,108,225	+				-0.5
1,108,225	+				+0.3
1,108,225	+				-0.4
1,108,225	+				-0.4
1,109,035	+				+0.8
1,109,087	+				-0.1
1,109,087	+				-0.4
1,109,146	-		BPHYT_RS04810	0.18	-0.1
1,109,238	-		BPHYT_RS04810	0.45	+0.8
1,109,282	-		BPHYT_RS04810	0.58	-0.5
1,109,469	+				+0.4
1,109,469	+				+2.1
1,109,469	+				-0.5
1,109,469	+				+0.4
1,109,471	+				+0.1
1,109,471	+				+0.2
1,109,471	+				+0.4
1,109,472	-				+0.4
1,109,472	-				-0.4
1,109,472	-				-0.8
1,109,516	+				+0.3
1,109,517	-				+0.0
1,109,517	-				-0.5
1,109,520	+				-0.4
1,109,548	+				+0.4
1,109,971	+		BPHYT_RS04815	0.22	+0.3
1,109,971	+		BPHYT_RS04815	0.22	+0.7
1,109,971	+		BPHYT_RS04815	0.22	-0.1
1,110,154	+		BPHYT_RS04815	0.33	+0.1
1,110,154	+		BPHYT_RS04815	0.33	+0.4
1,110,155	-		BPHYT_RS04815	0.33	-1.5
1,110,389	+		BPHYT_RS04815	0.47	+1.2
1,110,390	-		BPHYT_RS04815	0.47	-0.1
1,110,390	-		BPHYT_RS04815	0.47	-0.1
1,110,390	-		BPHYT_RS04815	0.47	-0.1
1,110,390	-		BPHYT_RS04815	0.47	+1.2