Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS03745 and BPHYT_RS03750 are separated by 137 nucleotides BPHYT_RS03750 and BPHYT_RS03755 are separated by 10 nucleotides BPHYT_RS03755 and BPHYT_RS03760 are separated by 38 nucleotides BPHYT_RS03760 and BPHYT_RS03765 are separated by 123 nucleotides
BPHYT_RS03745: BPHYT_RS03745 - cleavage protein, at 848,210 to 849,022
_RS03745
BPHYT_RS03750: BPHYT_RS03750 - hypothetical protein, at 849,160 to 849,639
_RS03750
BPHYT_RS03755: BPHYT_RS03755 - pilus assembly protein PilE, at 849,650 to 850,078
_RS03755
BPHYT_RS03760: BPHYT_RS03760 - hypothetical protein, at 850,117 to 850,596
_RS03760
BPHYT_RS03765: BPHYT_RS03765 - membrane protein, at 850,720 to 851,106
_RS03765
Position (kb) 849
850
851 Strain fitness (log2 ratio) -2
-1
0
1 at 848.675 kb on + strand, within BPHYT_RS03745 at 848.718 kb on - strand, within BPHYT_RS03745 at 848.790 kb on - strand, within BPHYT_RS03745 at 848.883 kb on + strand, within BPHYT_RS03745 at 848.884 kb on - strand, within BPHYT_RS03745 at 848.919 kb on - strand at 848.919 kb on - strand, within BPHYT_RS03745 at 849.018 kb on + strand at 849.137 kb on + strand at 849.138 kb on - strand at 849.138 kb on - strand at 849.339 kb on + strand, within BPHYT_RS03750 at 849.518 kb on + strand, within BPHYT_RS03750 at 849.518 kb on + strand, within BPHYT_RS03750 at 849.519 kb on - strand, within BPHYT_RS03750 at 849.519 kb on - strand, within BPHYT_RS03750 at 849.792 kb on - strand, within BPHYT_RS03755 at 849.901 kb on - strand, within BPHYT_RS03755 at 850.011 kb on + strand, within BPHYT_RS03755 at 850.658 kb on - strand at 851.070 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 1 mM remove 848,675 + BPHYT_RS03745 0.57 -0.5 848,718 - BPHYT_RS03745 0.62 -0.1 848,790 - BPHYT_RS03745 0.71 -0.5 848,883 + BPHYT_RS03745 0.83 +0.7 848,884 - BPHYT_RS03745 0.83 +0.3 848,919 - -0.7 848,919 - BPHYT_RS03745 0.87 +0.4 849,018 + +0.1 849,137 + -0.1 849,138 - -1.6 849,138 - -0.2 849,339 + BPHYT_RS03750 0.37 -0.4 849,518 + BPHYT_RS03750 0.75 +0.2 849,518 + BPHYT_RS03750 0.75 +0.7 849,519 - BPHYT_RS03750 0.75 +0.1 849,519 - BPHYT_RS03750 0.75 -0.4 849,792 - BPHYT_RS03755 0.33 -0.8 849,901 - BPHYT_RS03755 0.59 -0.6 850,011 + BPHYT_RS03755 0.84 -1.7 850,658 - -0.5 851,070 + -1.9
Or see this region's nucleotide sequence