Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS03485 and BPHYT_RS03490 are separated by 61 nucleotides BPHYT_RS03490 and BPHYT_RS03495 are separated by 63 nucleotides BPHYT_RS03495 and BPHYT_RS03500 are separated by 37 nucleotides
BPHYT_RS03485: BPHYT_RS03485 - 4-hydroxybenzoate octaprenyltransferase, at 786,396 to 787,259
_RS03485
BPHYT_RS03490: BPHYT_RS03490 - pyrroline-5-carboxylate reductase, at 787,321 to 788,136
_RS03490
BPHYT_RS03495: BPHYT_RS03495 - hypothetical protein, at 788,200 to 788,898
_RS03495
BPHYT_RS03500: BPHYT_RS03500 - glycolate oxidase, at 788,936 to 790,162
_RS03500
Position (kb) 788
789 Strain fitness (log2 ratio) -2
-1
0
1 at 787.240 kb on - strand at 788.174 kb on + strand at 788.174 kb on + strand at 788.211 kb on - strand at 788.211 kb on - strand at 788.332 kb on + strand, within BPHYT_RS03495 at 788.332 kb on + strand, within BPHYT_RS03495 at 788.727 kb on - strand, within BPHYT_RS03495 at 788.824 kb on - strand, within BPHYT_RS03495 at 788.939 kb on + strand at 789.118 kb on - strand, within BPHYT_RS03500 at 789.118 kb on - strand, within BPHYT_RS03500 at 789.256 kb on + strand, within BPHYT_RS03500 at 789.256 kb on + strand, within BPHYT_RS03500 at 789.256 kb on + strand, within BPHYT_RS03500 at 789.394 kb on - strand, within BPHYT_RS03500 at 789.459 kb on + strand, within BPHYT_RS03500 at 789.513 kb on + strand, within BPHYT_RS03500 at 789.591 kb on - strand, within BPHYT_RS03500 at 789.891 kb on + strand, within BPHYT_RS03500
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 1 mM remove 787,240 - -0.3 788,174 + +0.1 788,174 + +0.5 788,211 - +0.2 788,211 - +0.5 788,332 + BPHYT_RS03495 0.19 -1.0 788,332 + BPHYT_RS03495 0.19 -1.4 788,727 - BPHYT_RS03495 0.75 -2.1 788,824 - BPHYT_RS03495 0.89 -0.7 788,939 + +0.2 789,118 - BPHYT_RS03500 0.15 +0.1 789,118 - BPHYT_RS03500 0.15 -1.0 789,256 + BPHYT_RS03500 0.26 -0.5 789,256 + BPHYT_RS03500 0.26 +0.2 789,256 + BPHYT_RS03500 0.26 -0.3 789,394 - BPHYT_RS03500 0.37 -0.1 789,459 + BPHYT_RS03500 0.43 -0.2 789,513 + BPHYT_RS03500 0.47 +0.8 789,591 - BPHYT_RS03500 0.53 -0.1 789,891 + BPHYT_RS03500 0.78 -0.2
Or see this region's nucleotide sequence