Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS02735 and BPHYT_RS02740 are separated by 38 nucleotides BPHYT_RS02740 and BPHYT_RS02745 are separated by 109 nucleotides
BPHYT_RS02735: BPHYT_RS02735 - Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) <small>(from data)</small>, at 612,575 to 613,582
_RS02735
BPHYT_RS02740: BPHYT_RS02740 - N-acetylglucosamine-specific PTS system, I, HPr, and IIA components (nagF) <small>(from data)</small>, at 613,621 to 616,185
_RS02740
BPHYT_RS02745: BPHYT_RS02745 - N-acetylglucosamine-specific PTS system, IIBC components (nagE) <small>(from data)</small>, at 616,295 to 618,070
_RS02745
Position (kb) 613
614
615
616
617 Strain fitness (log2 ratio) -2
-1
0
1 at 613.013 kb on + strand, within BPHYT_RS02735 at 613.013 kb on + strand, within BPHYT_RS02735 at 613.013 kb on + strand, within BPHYT_RS02735 at 613.014 kb on - strand, within BPHYT_RS02735 at 613.014 kb on - strand, within BPHYT_RS02735 at 613.014 kb on - strand, within BPHYT_RS02735 at 613.014 kb on - strand, within BPHYT_RS02735 at 613.014 kb on - strand, within BPHYT_RS02735 at 613.014 kb on - strand, within BPHYT_RS02735 at 613.016 kb on - strand at 613.016 kb on - strand, within BPHYT_RS02735 at 613.112 kb on - strand, within BPHYT_RS02735 at 613.432 kb on + strand, within BPHYT_RS02735 at 613.497 kb on - strand at 613.642 kb on - strand at 613.642 kb on - strand at 613.642 kb on - strand at 613.779 kb on + strand at 613.854 kb on + strand at 613.854 kb on + strand at 614.912 kb on - strand, within BPHYT_RS02740 at 614.913 kb on + strand, within BPHYT_RS02740 at 614.914 kb on - strand, within BPHYT_RS02740 at 615.430 kb on + strand, within BPHYT_RS02740 at 615.431 kb on - strand, within BPHYT_RS02740 at 615.431 kb on - strand, within BPHYT_RS02740 at 615.431 kb on - strand, within BPHYT_RS02740 at 615.691 kb on - strand, within BPHYT_RS02740 at 616.201 kb on + strand at 616.228 kb on + strand at 616.228 kb on + strand at 616.228 kb on + strand at 616.232 kb on + strand at 616.232 kb on + strand at 616.643 kb on + strand, within BPHYT_RS02745 at 616.752 kb on + strand, within BPHYT_RS02745 at 616.753 kb on - strand, within BPHYT_RS02745 at 617.174 kb on + strand, within BPHYT_RS02745 at 617.174 kb on + strand, within BPHYT_RS02745
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 1 mM remove 613,013 + BPHYT_RS02735 0.43 +0.1 613,013 + BPHYT_RS02735 0.43 -2.1 613,013 + BPHYT_RS02735 0.43 +0.1 613,014 - BPHYT_RS02735 0.44 -0.4 613,014 - BPHYT_RS02735 0.44 +0.0 613,014 - BPHYT_RS02735 0.44 -1.4 613,014 - BPHYT_RS02735 0.44 -1.0 613,014 - BPHYT_RS02735 0.44 -0.8 613,014 - BPHYT_RS02735 0.44 -0.7 613,016 - +0.9 613,016 - BPHYT_RS02735 0.44 +0.2 613,112 - BPHYT_RS02735 0.53 +0.1 613,432 + BPHYT_RS02735 0.85 +0.6 613,497 - -0.6 613,642 - -0.4 613,642 - -0.6 613,642 - -0.3 613,779 + -0.3 613,854 + +1.2 613,854 + -0.0 614,912 - BPHYT_RS02740 0.50 -0.3 614,913 + BPHYT_RS02740 0.50 -0.3 614,914 - BPHYT_RS02740 0.50 -0.6 615,430 + BPHYT_RS02740 0.71 -0.2 615,431 - BPHYT_RS02740 0.71 +0.2 615,431 - BPHYT_RS02740 0.71 -1.1 615,431 - BPHYT_RS02740 0.71 +0.6 615,691 - BPHYT_RS02740 0.81 -0.2 616,201 + -0.8 616,228 + +0.1 616,228 + +0.3 616,228 + -0.2 616,232 + +0.1 616,232 + -0.2 616,643 + BPHYT_RS02745 0.20 -0.1 616,752 + BPHYT_RS02745 0.26 -0.3 616,753 - BPHYT_RS02745 0.26 -0.1 617,174 + BPHYT_RS02745 0.49 -1.4 617,174 + BPHYT_RS02745 0.49 -0.4
Or see this region's nucleotide sequence