Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS02590 and BPHYT_RS02595 are separated by 138 nucleotides BPHYT_RS02595 and BPHYT_RS02600 overlap by 4 nucleotides BPHYT_RS02600 and BPHYT_RS02605 are separated by 145 nucleotides BPHYT_RS02605 and BPHYT_RS02610 are separated by 22 nucleotides
BPHYT_RS02590: BPHYT_RS02590 - 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase, at 588,697 to 589,443
_RS02590
BPHYT_RS02595: BPHYT_RS02595 - sulfurtransferase, at 589,582 to 590,007
_RS02595
BPHYT_RS02600: BPHYT_RS02600 - glutaredoxin, at 590,004 to 590,267
_RS02600
BPHYT_RS02605: BPHYT_RS02605 - protein-export protein SecB, at 590,413 to 590,883
_RS02605
BPHYT_RS02610: BPHYT_RS02610 - glycerol-3-phosphate dehydrogenase [NAD(P)+], at 590,906 to 591,904
_RS02610
Position (kb) 590
591 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 589.046 kb on + strand, within BPHYT_RS02590 at 589.094 kb on + strand, within BPHYT_RS02590 at 589.217 kb on + strand, within BPHYT_RS02590 at 589.218 kb on - strand, within BPHYT_RS02590 at 589.439 kb on + strand at 589.439 kb on + strand at 589.530 kb on + strand at 589.530 kb on + strand at 589.614 kb on - strand at 589.614 kb on - strand at 589.866 kb on - strand, within BPHYT_RS02595 at 589.903 kb on - strand, within BPHYT_RS02595 at 590.022 kb on + strand at 590.022 kb on + strand at 590.022 kb on + strand at 590.022 kb on + strand at 590.022 kb on + strand at 590.101 kb on + strand, within BPHYT_RS02600 at 590.389 kb on + strand at 590.389 kb on + strand at 590.389 kb on + strand at 590.389 kb on + strand at 590.390 kb on - strand at 590.390 kb on - strand at 590.458 kb on + strand at 590.458 kb on + strand at 590.819 kb on - strand, within BPHYT_RS02605 at 590.881 kb on + strand at 590.882 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 1 mM remove 589,046 + BPHYT_RS02590 0.47 -2.1 589,094 + BPHYT_RS02590 0.53 -1.8 589,217 + BPHYT_RS02590 0.70 -2.4 589,218 - BPHYT_RS02590 0.70 -0.7 589,439 + -0.4 589,439 + -2.9 589,530 + -0.2 589,530 + +0.3 589,614 - -1.0 589,614 - -0.9 589,866 - BPHYT_RS02595 0.67 +1.3 589,903 - BPHYT_RS02595 0.75 -0.8 590,022 + +0.2 590,022 + -0.5 590,022 + +0.6 590,022 + +0.1 590,022 + +0.0 590,101 + BPHYT_RS02600 0.37 -0.8 590,389 + -0.6 590,389 + +0.5 590,389 + +0.0 590,389 + +0.2 590,390 - -2.4 590,390 - -2.1 590,458 + -0.9 590,458 + -1.9 590,819 - BPHYT_RS02605 0.86 -0.3 590,881 + +0.4 590,882 - -0.8
Or see this region's nucleotide sequence