Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS01310 and BPHYT_RS01315 are separated by 37 nucleotides BPHYT_RS01315 and BPHYT_RS01320 are separated by 2 nucleotides
BPHYT_RS01310: BPHYT_RS01310 - L-lysine 6-monooxygenase, at 299,503 to 300,828
_RS01310
BPHYT_RS01315: BPHYT_RS01315 - cupin, at 300,866 to 301,234
_RS01315
BPHYT_RS01320: BPHYT_RS01320 - FAD dependent oxidoreductase, at 301,237 to 302,298
_RS01320
Position (kb) 300
301
302 Strain fitness (log2 ratio) -1
0
1 at 300.011 kb on + strand, within BPHYT_RS01310 at 300.025 kb on + strand, within BPHYT_RS01310 at 300.026 kb on - strand, within BPHYT_RS01310 at 300.209 kb on - strand, within BPHYT_RS01310 at 300.209 kb on - strand, within BPHYT_RS01310 at 300.211 kb on - strand, within BPHYT_RS01310 at 300.211 kb on - strand, within BPHYT_RS01310 at 300.211 kb on - strand, within BPHYT_RS01310 at 300.221 kb on - strand, within BPHYT_RS01310 at 300.221 kb on - strand, within BPHYT_RS01310 at 300.229 kb on + strand, within BPHYT_RS01310 at 300.230 kb on - strand, within BPHYT_RS01310 at 300.230 kb on - strand, within BPHYT_RS01310 at 300.321 kb on + strand, within BPHYT_RS01310 at 300.325 kb on + strand, within BPHYT_RS01310 at 300.440 kb on + strand, within BPHYT_RS01310 at 300.516 kb on + strand, within BPHYT_RS01310 at 300.516 kb on + strand, within BPHYT_RS01310 at 300.590 kb on - strand, within BPHYT_RS01310 at 300.629 kb on - strand, within BPHYT_RS01310 at 300.736 kb on + strand at 300.826 kb on + strand at 300.826 kb on + strand at 300.826 kb on + strand at 300.826 kb on + strand at 300.827 kb on - strand at 300.950 kb on - strand, within BPHYT_RS01315 at 301.152 kb on + strand, within BPHYT_RS01315 at 301.277 kb on + strand at 301.310 kb on + strand at 301.311 kb on - strand at 301.562 kb on + strand, within BPHYT_RS01320 at 301.724 kb on + strand, within BPHYT_RS01320 at 301.724 kb on + strand at 301.724 kb on + strand, within BPHYT_RS01320 at 301.725 kb on - strand, within BPHYT_RS01320 at 301.725 kb on - strand, within BPHYT_RS01320 at 301.725 kb on - strand, within BPHYT_RS01320 at 301.725 kb on - strand, within BPHYT_RS01320 at 301.734 kb on - strand, within BPHYT_RS01320 at 301.734 kb on - strand, within BPHYT_RS01320 at 301.734 kb on - strand, within BPHYT_RS01320 at 301.776 kb on + strand, within BPHYT_RS01320 at 301.776 kb on + strand, within BPHYT_RS01320 at 301.785 kb on - strand, within BPHYT_RS01320 at 301.785 kb on - strand, within BPHYT_RS01320 at 301.785 kb on - strand, within BPHYT_RS01320 at 301.976 kb on - strand, within BPHYT_RS01320 at 301.976 kb on - strand, within BPHYT_RS01320 at 302.110 kb on + strand, within BPHYT_RS01320 at 302.164 kb on + strand, within BPHYT_RS01320 at 302.164 kb on + strand, within BPHYT_RS01320 at 302.165 kb on - strand, within BPHYT_RS01320
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 1 mM remove 300,011 + BPHYT_RS01310 0.38 -0.5 300,025 + BPHYT_RS01310 0.39 +0.3 300,026 - BPHYT_RS01310 0.39 -0.4 300,209 - BPHYT_RS01310 0.53 -0.4 300,209 - BPHYT_RS01310 0.53 -0.0 300,211 - BPHYT_RS01310 0.53 +0.8 300,211 - BPHYT_RS01310 0.53 +0.2 300,211 - BPHYT_RS01310 0.53 -0.9 300,221 - BPHYT_RS01310 0.54 +0.4 300,221 - BPHYT_RS01310 0.54 -0.2 300,229 + BPHYT_RS01310 0.55 +0.0 300,230 - BPHYT_RS01310 0.55 +0.1 300,230 - BPHYT_RS01310 0.55 +0.0 300,321 + BPHYT_RS01310 0.62 +0.4 300,325 + BPHYT_RS01310 0.62 +0.8 300,440 + BPHYT_RS01310 0.71 -0.5 300,516 + BPHYT_RS01310 0.76 -0.6 300,516 + BPHYT_RS01310 0.76 -0.7 300,590 - BPHYT_RS01310 0.82 -0.1 300,629 - BPHYT_RS01310 0.85 -0.3 300,736 + +0.5 300,826 + +0.6 300,826 + -1.6 300,826 + +0.3 300,826 + -0.2 300,827 - -1.0 300,950 - BPHYT_RS01315 0.23 -0.8 301,152 + BPHYT_RS01315 0.78 -0.8 301,277 + -0.1 301,310 + -0.3 301,311 - -0.4 301,562 + BPHYT_RS01320 0.31 -0.6 301,724 + BPHYT_RS01320 0.46 +1.2 301,724 + -0.0 301,724 + BPHYT_RS01320 0.46 -0.0 301,725 - BPHYT_RS01320 0.46 -0.5 301,725 - BPHYT_RS01320 0.46 +0.7 301,725 - BPHYT_RS01320 0.46 +0.2 301,725 - BPHYT_RS01320 0.46 -0.4 301,734 - BPHYT_RS01320 0.47 -0.4 301,734 - BPHYT_RS01320 0.47 +0.6 301,734 - BPHYT_RS01320 0.47 -0.0 301,776 + BPHYT_RS01320 0.51 -0.2 301,776 + BPHYT_RS01320 0.51 +0.6 301,785 - BPHYT_RS01320 0.52 -0.7 301,785 - BPHYT_RS01320 0.52 +0.2 301,785 - BPHYT_RS01320 0.52 +0.6 301,976 - BPHYT_RS01320 0.70 +0.4 301,976 - BPHYT_RS01320 0.70 +0.4 302,110 + BPHYT_RS01320 0.82 +0.1 302,164 + BPHYT_RS01320 0.87 -0.5 302,164 + BPHYT_RS01320 0.87 -0.4 302,165 - BPHYT_RS01320 0.87 -0.9
Or see this region's nucleotide sequence