Experiment: Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS00220 and BPHYT_RS00225 are separated by 169 nucleotides BPHYT_RS00225 and BPHYT_RS00230 overlap by 4 nucleotides
BPHYT_RS00220: BPHYT_RS00220 - choline kinase, at 57,733 to 58,674
_RS00220
BPHYT_RS00225: BPHYT_RS00225 - hypothetical protein, at 58,844 to 59,089
_RS00225
BPHYT_RS00230: BPHYT_RS00230 - sodium:solute symporter, at 59,086 to 60,612
_RS00230
Position (kb) 58
59
60 Strain fitness (log2 ratio) -1
0
1 at 57.901 kb on + strand, within BPHYT_RS00220 at 58.014 kb on + strand, within BPHYT_RS00220 at 58.314 kb on + strand, within BPHYT_RS00220 at 58.315 kb on - strand, within BPHYT_RS00220 at 58.400 kb on - strand, within BPHYT_RS00220 at 58.469 kb on - strand, within BPHYT_RS00220 at 58.597 kb on + strand at 58.612 kb on + strand at 58.671 kb on - strand at 58.770 kb on + strand at 58.931 kb on + strand, within BPHYT_RS00225 at 59.037 kb on - strand, within BPHYT_RS00225 at 59.164 kb on + strand at 59.324 kb on - strand, within BPHYT_RS00230 at 59.362 kb on + strand, within BPHYT_RS00230 at 59.363 kb on - strand, within BPHYT_RS00230 at 59.363 kb on - strand, within BPHYT_RS00230 at 59.658 kb on + strand, within BPHYT_RS00230 at 59.659 kb on - strand, within BPHYT_RS00230 at 59.659 kb on - strand, within BPHYT_RS00230 at 59.797 kb on + strand, within BPHYT_RS00230 at 59.797 kb on + strand, within BPHYT_RS00230 at 59.809 kb on + strand, within BPHYT_RS00230 at 59.810 kb on - strand, within BPHYT_RS00230 at 59.894 kb on + strand, within BPHYT_RS00230 at 59.948 kb on - strand, within BPHYT_RS00230 at 60.080 kb on + strand, within BPHYT_RS00230
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 1 mM remove 57,901 + BPHYT_RS00220 0.18 -0.2 58,014 + BPHYT_RS00220 0.30 +0.0 58,314 + BPHYT_RS00220 0.62 +0.2 58,315 - BPHYT_RS00220 0.62 -0.2 58,400 - BPHYT_RS00220 0.71 -1.3 58,469 - BPHYT_RS00220 0.78 -0.6 58,597 + -0.4 58,612 + +0.3 58,671 - -0.7 58,770 + +0.1 58,931 + BPHYT_RS00225 0.35 -0.8 59,037 - BPHYT_RS00225 0.78 -1.1 59,164 + -1.5 59,324 - BPHYT_RS00230 0.16 -0.8 59,362 + BPHYT_RS00230 0.18 +0.1 59,363 - BPHYT_RS00230 0.18 -0.2 59,363 - BPHYT_RS00230 0.18 +0.0 59,658 + BPHYT_RS00230 0.37 -0.9 59,659 - BPHYT_RS00230 0.38 +0.6 59,659 - BPHYT_RS00230 0.38 +0.1 59,797 + BPHYT_RS00230 0.47 +0.2 59,797 + BPHYT_RS00230 0.47 -0.6 59,809 + BPHYT_RS00230 0.47 +0.7 59,810 - BPHYT_RS00230 0.47 -0.2 59,894 + BPHYT_RS00230 0.53 -1.1 59,948 - BPHYT_RS00230 0.56 +0.1 60,080 + BPHYT_RS00230 0.65 -0.1
Or see this region's nucleotide sequence