Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS18005

Experiment: R2A with Chromium(III) Chloride Hexahydrate 0.078125 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chromium(III) Chloride Hexahydrate 0.078125 mM
3,932,661	+		LRK54_RS18005	0.30	-1.8
3,932,661	+		LRK54_RS18005	0.30	-1.0
3,932,661	+		LRK54_RS18005	0.30	-0.7
3,932,661	+		LRK54_RS18005	0.30	+0.6
3,932,662	-		LRK54_RS18005	0.30	-2.4
3,932,662	-		LRK54_RS18005	0.30	-1.5
3,932,824	+		LRK54_RS18005	0.64	-2.9
3,932,824	+		LRK54_RS18005	0.64	-0.8
3,932,824	+		LRK54_RS18005	0.64	-1.6
3,932,824	+		LRK54_RS18005	0.64	-0.4
3,932,824	+		LRK54_RS18005	0.64	-2.5
3,932,824	+		LRK54_RS18005	0.64	-1.2
3,932,824	+		LRK54_RS18005	0.64	+1.3
3,932,824	+		LRK54_RS18005	0.64	-0.1
3,932,825	-		LRK54_RS18005	0.64	-2.6
3,932,825	-		LRK54_RS18005	0.64	-0.8
3,932,825	-		LRK54_RS18005	0.64	-1.0
3,932,825	-		LRK54_RS18005	0.64	-2.1
3,932,825	-		LRK54_RS18005	0.64	+1.7
3,932,825	-		LRK54_RS18005	0.64	-2.4
3,932,825	-		LRK54_RS18005	0.64	+0.6
3,932,825	-		LRK54_RS18005	0.64	-1.4
3,932,825	-		LRK54_RS18005	0.64	-1.1
3,932,825	-		LRK54_RS18005	0.64	-1.3
3,932,825	-		LRK54_RS18005	0.64	-1.0
3,932,825	-		LRK54_RS18005	0.64	-1.6
3,932,825	-		LRK54_RS18005	0.64	+1.0
3,932,825	-		LRK54_RS18005	0.64	+0.6
3,932,832	+		LRK54_RS18005	0.65	-1.1
3,932,832	+		LRK54_RS18005	0.65	-1.1
3,932,832	+		LRK54_RS18005	0.65	+0.6
3,932,832	+		LRK54_RS18005	0.65	+1.6
3,932,832	+		LRK54_RS18005	0.65	+2.0
3,932,832	+		LRK54_RS18005	0.65	+1.6
3,932,832	+		LRK54_RS18005	0.65	-0.6
3,932,832	+		LRK54_RS18005	0.65	-0.6
3,932,832	+		LRK54_RS18005	0.65	-1.1
3,932,833	-		LRK54_RS18005	0.66	-1.8
3,932,833	-		LRK54_RS18005	0.66	+0.6
3,932,833	-		LRK54_RS18005	0.66	-0.4
3,932,833	-		LRK54_RS18005	0.66	-0.1
3,932,833	-		LRK54_RS18005	0.66	-0.4
3,932,833	-		LRK54_RS18005	0.66	-0.3
3,932,833	-		LRK54_RS18005	0.66	-0.8
3,932,833	-		LRK54_RS18005	0.66	-0.0
3,932,833	-		LRK54_RS18005	0.66	-1.4
3,932,833	-		LRK54_RS18005	0.66	+0.6
3,932,833	-		LRK54_RS18005	0.66	-2.3
3,932,967	+				-0.9
3,932,967	+				-0.7
3,932,967	+				-0.6
3,932,967	+				-1.9
3,932,967	+				-0.8
3,932,967	+				-0.3
3,932,967	+				-0.7
3,932,967	+				-0.0
3,932,967	+				-1.1
3,932,967	+				-0.1
3,932,967	+				-1.5
3,932,967	+				-0.4
3,932,968	-				-1.6
3,932,968	-				+0.6
3,932,968	-				-1.7
3,932,968	-				-0.4
3,932,968	-				-1.4
3,932,968	-				+1.0
3,932,968	-				-0.8
3,932,968	-				-2.8
3,932,968	-				-0.9
3,932,968	-				-0.4
3,932,968	-				-1.7
3,933,249	-				+1.6
3,933,249	-				+0.2
3,933,394	+		LRK54_RS18015	0.14	+0.9
3,933,394	+		LRK54_RS18015	0.14	+1.4
3,933,394	+		LRK54_RS18015	0.14	+0.2
3,933,394	+		LRK54_RS18015	0.14	-0.7
3,933,394	+		LRK54_RS18015	0.14	-0.3
3,933,394	+		LRK54_RS18015	0.14	+1.0
3,933,394	+		LRK54_RS18015	0.14	-0.5
3,933,394	+		LRK54_RS18015	0.14	+0.6
3,933,394	+		LRK54_RS18015	0.14	-1.4
3,933,394	+		LRK54_RS18015	0.14	+1.6
3,933,394	+		LRK54_RS18015	0.14	-1.7
3,933,394	+		LRK54_RS18015	0.14	-0.4
3,933,394	+		LRK54_RS18015	0.14	+0.2
3,933,394	+		LRK54_RS18015	0.14	+0.2
3,933,394	+		LRK54_RS18015	0.14	+0.3
3,933,394	+		LRK54_RS18015	0.14	+0.6
3,933,394	+		LRK54_RS18015	0.14	+1.6
3,933,395	-		LRK54_RS18015	0.14	+0.6
3,933,395	-		LRK54_RS18015	0.14	-0.6
3,933,395	-		LRK54_RS18015	0.14	-1.1
3,933,395	-		LRK54_RS18015	0.14	-0.5
3,933,395	-		LRK54_RS18015	0.14	-1.3
3,933,395	-		LRK54_RS18015	0.14	-0.3
3,933,395	-		LRK54_RS18015	0.14	+0.3
3,933,395	-		LRK54_RS18015	0.14	+2.6
3,933,395	-		LRK54_RS18015	0.14	-0.6
3,933,395	-		LRK54_RS18015	0.14	-2.4
3,933,395	-		LRK54_RS18015	0.14	-1.1
3,933,395	-		LRK54_RS18015	0.14	-1.4
3,933,395	-		LRK54_RS18015	0.14	-0.4
3,933,395	-		LRK54_RS18015	0.14	-1.5
3,933,395	-		LRK54_RS18015	0.14	-0.4
3,933,395	-		LRK54_RS18015	0.14	-0.8
3,933,395	-		LRK54_RS18015	0.14	+2.1
3,933,395	-		LRK54_RS18015	0.14	-1.4
3,933,395	-		LRK54_RS18015	0.14	+0.2
3,933,395	-		LRK54_RS18015	0.14	-1.1
3,933,395	-		LRK54_RS18015	0.14	-0.5
3,933,395	-		LRK54_RS18015	0.14	+1.3
3,933,395	-		LRK54_RS18015	0.14	+1.1
3,933,395	-		LRK54_RS18015	0.14	-1.1
3,933,395	-		LRK54_RS18015	0.14	-1.8
3,933,553	+		LRK54_RS18015	0.31	-0.7
3,933,553	+		LRK54_RS18015	0.31	-1.1
3,933,553	+		LRK54_RS18015	0.31	+0.7
3,933,553	+		LRK54_RS18015	0.31	-1.1
3,933,553	+		LRK54_RS18015	0.31	-0.9
3,933,553	+		LRK54_RS18015	0.31	-1.4
3,933,554	-		LRK54_RS18015	0.31	-0.4
3,933,554	-		LRK54_RS18015	0.31	+0.6
3,933,554	-		LRK54_RS18015	0.31	+1.0
3,933,554	-		LRK54_RS18015	0.31	+0.6
3,933,709	+		LRK54_RS18015	0.48	-0.0
3,933,709	+		LRK54_RS18015	0.48	-0.0
3,933,709	+		LRK54_RS18015	0.48	+0.8
3,933,709	+		LRK54_RS18015	0.48	+2.6
3,933,709	+		LRK54_RS18015	0.48	+0.1
3,933,709	+		LRK54_RS18015	0.48	+0.6
3,933,709	+		LRK54_RS18015	0.48	+0.4
3,933,709	+		LRK54_RS18015	0.48	-0.2
3,933,710	-		LRK54_RS18015	0.49	-0.0
3,933,710	-		LRK54_RS18015	0.49	+0.7
3,933,710	-		LRK54_RS18015	0.49	-0.5
3,933,710	-		LRK54_RS18015	0.49	+0.7
3,933,710	-		LRK54_RS18015	0.49	+0.2
3,933,710	-		LRK54_RS18015	0.49	-0.0
3,933,710	-		LRK54_RS18015	0.49	+1.1
3,933,710	-		LRK54_RS18015	0.49	-0.9
3,933,790	+		LRK54_RS18015	0.57	+1.0
3,933,790	+		LRK54_RS18015	0.57	-0.4
3,933,790	+		LRK54_RS18015	0.57	+1.0
3,933,790	+		LRK54_RS18015	0.57	+1.6
3,933,790	+		LRK54_RS18015	0.57	-0.0
3,933,790	+		LRK54_RS18015	0.57	-0.7
3,933,790	+		LRK54_RS18015	0.57	+4.1
3,933,790	+		LRK54_RS18015	0.57	-0.6
3,933,790	+		LRK54_RS18015	0.57	-1.3
3,933,790	+		LRK54_RS18015	0.57	-0.4
3,933,790	+		LRK54_RS18015	0.57	+1.2
3,933,790	+		LRK54_RS18015	0.57	-0.8
3,933,790	+		LRK54_RS18015	0.57	+0.6
3,933,790	+		LRK54_RS18015	0.57	-0.1
3,933,790	+		LRK54_RS18015	0.57	-0.4
3,933,790	+		LRK54_RS18015	0.57	-0.4
3,933,790	+		LRK54_RS18015	0.57	-1.1
3,933,790	+		LRK54_RS18015	0.57	-0.6
3,933,790	+		LRK54_RS18015	0.57	-0.9
3,933,790	+		LRK54_RS18015	0.57	+2.3
3,933,790	+		LRK54_RS18015	0.57	-0.4
3,933,791	-		LRK54_RS18015	0.57	-0.8
3,933,791	-		LRK54_RS18015	0.57	+0.6
3,933,791	-		LRK54_RS18015	0.57	-1.0
3,933,791	-		LRK54_RS18015	0.57	+2.6
3,933,791	-		LRK54_RS18015	0.57	-1.1
3,933,791	-		LRK54_RS18015	0.57	-1.0
3,933,791	-		LRK54_RS18015	0.57	-0.3
3,933,791	-		LRK54_RS18015	0.57	+1.6
3,933,791	-		LRK54_RS18015	0.57	-0.6
3,933,791	-		LRK54_RS18015	0.57	-1.7
3,933,791	-		LRK54_RS18015	0.57	-0.6
3,933,791	-		LRK54_RS18015	0.57	+0.6
3,933,791	-		LRK54_RS18015	0.57	-0.1
3,933,791	-		LRK54_RS18015	0.57	+0.3
3,933,791	-		LRK54_RS18015	0.57	-1.4
3,933,791	-		LRK54_RS18015	0.57	+1.1
3,933,791	-		LRK54_RS18015	0.57	-1.0
3,933,791	-		LRK54_RS18015	0.57	+0.0
3,933,791	-		LRK54_RS18015	0.57	+1.2
3,933,791	-		LRK54_RS18015	0.57	-0.3
3,933,791	-		LRK54_RS18015	0.57	-1.0
3,933,884	+		LRK54_RS18015	0.68	-0.2
3,933,884	+		LRK54_RS18015	0.68	+0.9
3,933,884	+		LRK54_RS18015	0.68	+1.0
3,933,884	+		LRK54_RS18015	0.68	-0.9
3,933,884	+		LRK54_RS18015	0.68	-1.1
3,933,884	+		LRK54_RS18015	0.68	+0.7
3,933,885	-		LRK54_RS18015	0.68	-0.3
3,933,885	-		LRK54_RS18015	0.68	+0.2
3,933,885	-		LRK54_RS18015	0.68	-0.4
3,933,885	-		LRK54_RS18015	0.68	+1.1
3,933,885	-		LRK54_RS18015	0.68	-1.6
3,933,885	-		LRK54_RS18015	0.68	-0.8
3,933,885	-		LRK54_RS18015	0.68	-0.6
3,933,885	-		LRK54_RS18015	0.68	-0.8
3,933,885	-		LRK54_RS18015	0.68	-0.3
3,933,886	+		LRK54_RS18015	0.68	-2.1
3,933,886	+		LRK54_RS18015	0.68	-0.9
3,933,886	+		LRK54_RS18015	0.68	-0.8
3,933,886	+		LRK54_RS18015	0.68	+0.4
3,933,886	+		LRK54_RS18015	0.68	-1.0
3,933,886	+		LRK54_RS18015	0.68	+1.0
3,933,886	+		LRK54_RS18015	0.68	-2.3
3,933,886	+		LRK54_RS18015	0.68	-0.5
3,933,886	+		LRK54_RS18015	0.68	+0.2
3,933,886	+		LRK54_RS18015	0.68	-0.4
3,933,886	+		LRK54_RS18015	0.68	-1.5
3,933,886	+		LRK54_RS18015	0.68	+0.6
3,933,886	+		LRK54_RS18015	0.68	+0.6
3,933,886	+		LRK54_RS18015	0.68	+1.8
3,933,886	+		LRK54_RS18015	0.68	-0.4
3,933,886	+		LRK54_RS18015	0.68	+0.3
3,933,886	+		LRK54_RS18015	0.68	-1.1
3,933,886	+		LRK54_RS18015	0.68	+0.2
3,933,886	+		LRK54_RS18015	0.68	+0.4
3,933,886	+		LRK54_RS18015	0.68	+0.2
3,933,886	+		LRK54_RS18015	0.68	+0.6
3,933,886	+		LRK54_RS18015	0.68	-0.7
3,933,886	+		LRK54_RS18015	0.68	-0.6
3,933,887	-		LRK54_RS18015	0.68	+0.7
3,933,887	-		LRK54_RS18015	0.68	+0.6
3,933,887	-		LRK54_RS18015	0.68	-0.0
3,933,887	-		LRK54_RS18015	0.68	-0.1
3,933,887	-		LRK54_RS18015	0.68	-0.6
3,933,887	-		LRK54_RS18015	0.68	-0.0
3,933,887	-		LRK54_RS18015	0.68	-1.0
3,933,887	-		LRK54_RS18015	0.68	-0.4
3,933,887	-		LRK54_RS18015	0.68	-0.6
3,933,887	-		LRK54_RS18015	0.68	-1.1
3,933,887	-		LRK54_RS18015	0.68	-0.6
3,933,887	-		LRK54_RS18015	0.68	-0.9
3,933,887	-		LRK54_RS18015	0.68	-0.8
3,933,887	-		LRK54_RS18015	0.68	-0.9
3,933,887	-		LRK54_RS18015	0.68	+1.7
3,933,887	-		LRK54_RS18015	0.68	+2.6
3,933,887	-		LRK54_RS18015	0.68	-0.6
3,933,887	-		LRK54_RS18015	0.68	+1.0
3,933,887	-		LRK54_RS18015	0.68	+0.6
3,933,887	-		LRK54_RS18015	0.68	-0.0
3,933,887	-		LRK54_RS18015	0.68	-2.2
3,933,887	-		LRK54_RS18015	0.68	-1.1
3,933,887	-		LRK54_RS18015	0.68	-0.0
3,933,887	-		LRK54_RS18015	0.68	-0.6
3,933,910	+		LRK54_RS18015	0.71	+0.1
3,933,911	-		LRK54_RS18015	0.71	-0.8
3,933,911	-		LRK54_RS18015	0.71	+1.7
3,933,911	-		LRK54_RS18015	0.71	-0.3