Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS16925

Experiment: R2A with Chromium(III) Chloride Hexahydrate 0.078125 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chromium(III) Chloride Hexahydrate 0.078125 mM
3,699,273	+				+1.1
3,699,273	+				+0.1
3,699,273	+				-0.9
3,699,273	+				-2.6
3,699,273	+				-0.5
3,699,273	+				+0.2
3,699,273	+				-1.2
3,699,273	+				-0.9
3,699,273	+				+0.5
3,699,273	+				+1.8
3,699,273	+				-1.1
3,699,274	-				-1.1
3,699,499	+				-0.1
3,699,499	+				-0.5
3,699,499	+				-0.2
3,699,499	+				+0.1
3,699,499	+				-0.8
3,699,499	+				-0.1
3,699,499	+				+0.8
3,699,500	-				-0.1
3,699,500	-				-0.4
3,699,500	-				-0.8
3,699,500	-				-0.0
3,699,500	-				-0.3
3,699,521	+				-0.4
3,699,521	+				-0.8
3,699,521	+				-0.8
3,699,522	-				+0.2
3,699,522	-				-1.2
3,699,740	+		LRK54_RS16920	0.34	+0.4
3,699,740	+		LRK54_RS16920	0.34	+0.6
3,699,740	+		LRK54_RS16920	0.34	-0.8
3,699,740	+		LRK54_RS16920	0.34	-0.5
3,699,740	+		LRK54_RS16920	0.34	-1.1
3,699,740	+		LRK54_RS16920	0.34	-0.3
3,699,741	-		LRK54_RS16920	0.34	+0.0
3,699,741	-		LRK54_RS16920	0.34	-2.6
3,699,741	-		LRK54_RS16920	0.34	+0.1
3,699,741	-		LRK54_RS16920	0.34	-0.3
3,699,741	-		LRK54_RS16920	0.34	+1.0
3,699,741	-		LRK54_RS16920	0.34	+0.9
3,699,741	-		LRK54_RS16920	0.34	-0.1
3,699,741	-		LRK54_RS16920	0.34	-0.8
3,699,902	+		LRK54_RS16920	0.62	+0.4
3,699,903	-		LRK54_RS16920	0.62	-1.7
3,699,995	+		LRK54_RS16920	0.78	+0.1
3,699,995	+		LRK54_RS16920	0.78	-0.7
3,699,995	+		LRK54_RS16920	0.78	+0.5
3,699,995	+		LRK54_RS16920	0.78	-0.2
3,699,995	+		LRK54_RS16920	0.78	-1.2
3,699,995	+		LRK54_RS16920	0.78	+0.6
3,699,995	+		LRK54_RS16920	0.78	-0.7
3,699,995	+		LRK54_RS16920	0.78	-0.5
3,699,996	-		LRK54_RS16920	0.78	-1.9
3,700,029	+		LRK54_RS16920	0.84	+0.2
3,700,029	+		LRK54_RS16920	0.84	+0.2
3,700,029	+		LRK54_RS16920	0.84	+1.9
3,700,029	+		LRK54_RS16920	0.84	+0.1
3,700,029	+		LRK54_RS16920	0.84	+2.2
3,700,029	+		LRK54_RS16920	0.84	-1.0
3,700,029	+		LRK54_RS16920	0.84	+0.1
3,700,030	-		LRK54_RS16920	0.84	+0.5
3,700,030	-		LRK54_RS16920	0.84	-1.1
3,700,030	-		LRK54_RS16920	0.84	-0.3
3,700,030	-		LRK54_RS16920	0.84	-2.1
3,700,030	-		LRK54_RS16920	0.84	+0.4
3,700,030	-		LRK54_RS16920	0.84	+0.6
3,700,030	-		LRK54_RS16920	0.84	+0.2
3,700,280	-				-1.1
3,700,339	+				+1.5
3,700,339	+				-0.5
3,700,339	+				-0.9
3,700,339	+				+0.8
3,700,340	-				-1.6
3,700,340	-				+0.9
3,700,340	-				+0.2
3,700,340	-				-1.9
3,700,340	-				-0.8
3,700,340	-				+0.6
3,700,340	-				-0.8
3,700,498	+		LRK54_RS16925	0.15	+0.3
3,700,498	+		LRK54_RS16925	0.15	-0.1
3,700,498	+		LRK54_RS16925	0.15	+0.9
3,700,498	+		LRK54_RS16925	0.15	+0.3
3,700,498	+		LRK54_RS16925	0.15	+0.5
3,700,498	+		LRK54_RS16925	0.15	+0.1
3,700,498	+		LRK54_RS16925	0.15	-1.4
3,700,498	+		LRK54_RS16925	0.15	+1.0
3,700,498	+		LRK54_RS16925	0.15	-0.1
3,700,498	+		LRK54_RS16925	0.15	+0.6
3,700,498	+		LRK54_RS16925	0.15	+0.4
3,700,499	-		LRK54_RS16925	0.15	-1.1
3,700,499	-		LRK54_RS16925	0.15	-0.1
3,700,499	-		LRK54_RS16925	0.15	-0.6
3,700,499	-		LRK54_RS16925	0.15	+0.8
3,700,499	-		LRK54_RS16925	0.15	-1.5
3,700,499	-		LRK54_RS16925	0.15	-1.5
3,700,499	-		LRK54_RS16925	0.15	-2.5
3,700,499	-		LRK54_RS16925	0.15	-1.3
3,700,499	-		LRK54_RS16925	0.15	-0.3
3,700,499	-		LRK54_RS16925	0.15	+0.7
3,700,499	-		LRK54_RS16925	0.15	-0.0
3,700,499	-		LRK54_RS16925	0.15	+0.6
3,700,499	-		LRK54_RS16925	0.15	+1.5
3,700,499	-		LRK54_RS16925	0.15	-1.2
3,700,499	-		LRK54_RS16925	0.15	+0.9
3,700,499	-		LRK54_RS16925	0.15	+1.5
3,700,499	-		LRK54_RS16925	0.15	-1.1
3,700,499	-		LRK54_RS16925	0.15	+0.2
3,700,499	-		LRK54_RS16925	0.15	+0.3
3,700,499	-		LRK54_RS16925	0.15	-1.2
3,700,499	-		LRK54_RS16925	0.15	-0.9
3,700,499	-		LRK54_RS16925	0.15	-0.1
3,700,546	+		LRK54_RS16925	0.17	+0.2
3,700,546	+		LRK54_RS16925	0.17	+0.2
3,700,546	+		LRK54_RS16925	0.17	-1.1
3,700,546	+		LRK54_RS16925	0.17	-0.8
3,700,546	+		LRK54_RS16925	0.17	+0.5
3,700,546	+		LRK54_RS16925	0.17	+1.3
3,700,546	+		LRK54_RS16925	0.17	-0.5
3,700,546	+		LRK54_RS16925	0.17	-1.2
3,700,546	+		LRK54_RS16925	0.17	-0.1
3,700,546	+		LRK54_RS16925	0.17	+1.5
3,700,546	+		LRK54_RS16925	0.17	+1.5
3,700,546	+		LRK54_RS16925	0.17	+0.3
3,700,546	+		LRK54_RS16925	0.17	-0.3
3,700,546	+		LRK54_RS16925	0.17	+1.8
3,700,546	+		LRK54_RS16925	0.17	-2.1
3,700,546	+		LRK54_RS16925	0.17	-0.3
3,700,546	+		LRK54_RS16925	0.17	-0.7
3,700,546	+		LRK54_RS16925	0.17	-0.7
3,700,546	+		LRK54_RS16925	0.17	+0.3
3,700,546	+		LRK54_RS16925	0.17	-1.7
3,700,546	+		LRK54_RS16925	0.17	-0.2
3,700,546	+		LRK54_RS16925	0.17	+0.0
3,700,546	+		LRK54_RS16925	0.17	-0.3
3,700,546	+		LRK54_RS16925	0.17	+0.2
3,700,546	+		LRK54_RS16925	0.17	-1.2
3,700,546	+		LRK54_RS16925	0.17	-0.1
3,700,546	+		LRK54_RS16925	0.17	-0.4
3,700,546	+		LRK54_RS16925	0.17	+0.6
3,700,546	+		LRK54_RS16925	0.17	+0.5
3,700,546	+		LRK54_RS16925	0.17	-1.2
3,700,546	+		LRK54_RS16925	0.17	-1.0
3,700,546	+		LRK54_RS16925	0.17	-0.4
3,700,546	+		LRK54_RS16925	0.17	+0.2
3,700,546	+		LRK54_RS16925	0.17	-0.2
3,700,546	+		LRK54_RS16925	0.17	-1.4
3,700,546	+		LRK54_RS16925	0.17	-1.6
3,700,547	-		LRK54_RS16925	0.17	-0.5
3,700,547	-		LRK54_RS16925	0.17	-0.3
3,700,547	-		LRK54_RS16925	0.17	+0.1
3,700,547	-		LRK54_RS16925	0.17	-0.3
3,700,547	-		LRK54_RS16925	0.17	-1.5
3,700,547	-		LRK54_RS16925	0.17	-0.5
3,700,547	-		LRK54_RS16925	0.17	-0.6
3,700,547	-		LRK54_RS16925	0.17	+1.2
3,700,547	-		LRK54_RS16925	0.17	-1.4
3,700,547	-		LRK54_RS16925	0.17	-0.4
3,700,547	-		LRK54_RS16925	0.17	+1.5
3,700,547	-		LRK54_RS16925	0.17	+0.1
3,700,547	-		LRK54_RS16925	0.17	-0.9
3,700,547	-		LRK54_RS16925	0.17	+0.3
3,700,547	-		LRK54_RS16925	0.17	-0.1
3,700,547	-		LRK54_RS16925	0.17	-1.1
3,700,547	-		LRK54_RS16925	0.17	+0.1
3,700,547	-		LRK54_RS16925	0.17	+1.4
3,700,547	-		LRK54_RS16925	0.17	+0.8
3,700,547	-		LRK54_RS16925	0.17	-1.2
3,700,547	-		LRK54_RS16925	0.17	-0.3
3,700,547	-		LRK54_RS16925	0.17	+0.5
3,700,547	-		LRK54_RS16925	0.17	-0.2
3,700,547	-		LRK54_RS16925	0.17	-0.2
3,700,547	-		LRK54_RS16925	0.17	-1.0
3,700,547	-		LRK54_RS16925	0.17	-3.0
3,700,671	+		LRK54_RS16925	0.23	-0.7
3,700,671	+		LRK54_RS16925	0.23	-1.2
3,700,671	+		LRK54_RS16925	0.23	-0.3
3,700,671	+		LRK54_RS16925	0.23	-2.1
3,700,671	+		LRK54_RS16925	0.23	+0.5
3,700,672	-		LRK54_RS16925	0.23	+1.3
3,700,672	-		LRK54_RS16925	0.23	+0.7
3,700,759	+		LRK54_RS16925	0.27	-1.2
3,700,759	+		LRK54_RS16925	0.27	+0.2
3,700,759	+		LRK54_RS16925	0.27	+0.9
3,700,759	+		LRK54_RS16925	0.27	+0.6
3,700,759	+		LRK54_RS16925	0.27	+0.7
3,700,759	+		LRK54_RS16925	0.27	+2.8
3,700,759	+		LRK54_RS16925	0.27	+1.1
3,700,759	+		LRK54_RS16925	0.27	+0.6
3,700,759	+		LRK54_RS16925	0.27	-0.8
3,700,759	+		LRK54_RS16925	0.27	+0.3
3,700,759	+		LRK54_RS16925	0.27	-1.1
3,700,759	+		LRK54_RS16925	0.27	-1.6
3,700,759	+		LRK54_RS16925	0.27	+0.1
3,700,759	+		LRK54_RS16925	0.27	-1.3
3,700,759	+		LRK54_RS16925	0.27	-0.1
3,700,759	+		LRK54_RS16925	0.27	+0.1
3,700,759	+		LRK54_RS16925	0.27	-1.7
3,700,759	+		LRK54_RS16925	0.27	-2.1
3,700,759	+		LRK54_RS16925	0.27	+0.9
3,700,759	+		LRK54_RS16925	0.27	-0.5
3,700,759	+		LRK54_RS16925	0.27	+0.3
3,700,759	+		LRK54_RS16925	0.27	+1.5
3,700,759	+		LRK54_RS16925	0.27	-0.2
3,700,759	+		LRK54_RS16925	0.27	-0.1
3,700,759	+		LRK54_RS16925	0.27	-0.6
3,700,759	+		LRK54_RS16925	0.27	-1.6
3,700,759	+		LRK54_RS16925	0.27	+0.2
3,700,759	+		LRK54_RS16925	0.27	-0.7
3,700,759	+		LRK54_RS16925	0.27	-0.8
3,700,760	-		LRK54_RS16925	0.27	-0.4
3,700,760	-		LRK54_RS16925	0.27	+0.2
3,700,760	-		LRK54_RS16925	0.27	+0.8
3,700,760	-		LRK54_RS16925	0.27	-0.5
3,700,760	-		LRK54_RS16925	0.27	-1.6
3,700,760	-		LRK54_RS16925	0.27	+1.0
3,700,760	-		LRK54_RS16925	0.27	+1.0
3,700,760	-		LRK54_RS16925	0.27	+1.0
3,700,760	-		LRK54_RS16925	0.27	+0.8
3,700,760	-		LRK54_RS16925	0.27	-0.3
3,700,760	-		LRK54_RS16925	0.27	+0.2
3,700,760	-		LRK54_RS16925	0.27	+0.2
3,700,760	-		LRK54_RS16925	0.27	+1.0
3,700,760	-		LRK54_RS16925	0.27	-0.1
3,700,760	-		LRK54_RS16925	0.27	-0.6
3,700,760	-		LRK54_RS16925	0.27	-1.6
3,700,760	-		LRK54_RS16925	0.27	-0.6
3,700,760	-		LRK54_RS16925	0.27	-1.3
3,700,760	-		LRK54_RS16925	0.27	+0.6
3,700,760	-		LRK54_RS16925	0.27	-0.2
3,700,760	-		LRK54_RS16925	0.27	+0.5
3,700,760	-		LRK54_RS16925	0.27	-0.3
3,700,760	-		LRK54_RS16925	0.27	+0.1
3,700,760	-		LRK54_RS16925	0.27	+1.9
3,700,760	-		LRK54_RS16925	0.27	+1.3
3,700,760	-		LRK54_RS16925	0.27	+0.5
3,700,761	+		LRK54_RS16925	0.27	+0.7
3,700,761	+		LRK54_RS16925	0.27	+0.1
3,700,761	+		LRK54_RS16925	0.27	-1.6
3,700,762	-		LRK54_RS16925	0.27	+1.1
3,700,762	-		LRK54_RS16925	0.27	+2.1
3,700,762	-		LRK54_RS16925	0.27	-0.7
3,700,762	-		LRK54_RS16925	0.27	-0.3
3,700,783	+		LRK54_RS16925	0.28	+2.7
3,700,783	+		LRK54_RS16925	0.28	-0.2
3,700,783	+		LRK54_RS16925	0.28	+0.9
3,700,783	+		LRK54_RS16925	0.28	+1.8
3,700,783	+		LRK54_RS16925	0.28	-0.1
3,700,783	+		LRK54_RS16925	0.28	+1.8
3,700,783	+		LRK54_RS16925	0.28	+1.2
3,700,783	+		LRK54_RS16925	0.28	+0.4
3,700,783	+		LRK54_RS16925	0.28	-0.7
3,700,783	+		LRK54_RS16925	0.28	+0.2
3,700,784	-		LRK54_RS16925	0.28	-0.8
3,700,784	-		LRK54_RS16925	0.28	+0.6
3,700,784	-		LRK54_RS16925	0.28	+0.2
3,700,784	-		LRK54_RS16925	0.28	-0.4
3,701,068	+		LRK54_RS16925	0.42	-0.1
3,701,068	+		LRK54_RS16925	0.42	-0.3
3,701,068	+		LRK54_RS16925	0.42	-0.0
3,701,068	+		LRK54_RS16925	0.42	+1.7
3,701,069	-		LRK54_RS16925	0.42	+0.8
3,701,069	-		LRK54_RS16925	0.42	-1.1
3,701,069	-		LRK54_RS16925	0.42	-0.2
3,701,069	-		LRK54_RS16925	0.42	-0.5
3,701,069	-		LRK54_RS16925	0.42	-2.1
3,701,069	-		LRK54_RS16925	0.42	+0.1
3,701,069	-		LRK54_RS16925	0.42	+0.4
3,701,069	-		LRK54_RS16925	0.42	-0.6
3,701,069	-		LRK54_RS16925	0.42	-0.9
3,701,098	+		LRK54_RS16925	0.44	-2.6
3,701,098	+		LRK54_RS16925	0.44	+2.1
3,701,098	+		LRK54_RS16925	0.44	+0.9
3,701,098	+		LRK54_RS16925	0.44	-2.3
3,701,098	+		LRK54_RS16925	0.44	-1.2
3,701,098	+		LRK54_RS16925	0.44	-1.9
3,701,098	+		LRK54_RS16925	0.44	-1.6
3,701,098	+		LRK54_RS16925	0.44	+0.1
3,701,098	+		LRK54_RS16925	0.44	-1.4
3,701,098	+		LRK54_RS16925	0.44	-0.6
3,701,098	+		LRK54_RS16925	0.44	+0.6
3,701,098	+		LRK54_RS16925	0.44	-0.4
3,701,099	-		LRK54_RS16925	0.44	-1.0
3,701,099	-		LRK54_RS16925	0.44	+0.4
3,701,099	-		LRK54_RS16925	0.44	+0.6
3,701,099	-		LRK54_RS16925	0.44	+0.7
3,701,099	-		LRK54_RS16925	0.44	-0.9
3,701,099	-		LRK54_RS16925	0.44	-1.6
3,701,099	-		LRK54_RS16925	0.44	+0.0
3,701,099	-		LRK54_RS16925	0.44	+1.9
3,701,099	-		LRK54_RS16925	0.44	+0.8
3,701,099	-		LRK54_RS16925	0.44	+0.5
3,701,099	-		LRK54_RS16925	0.44	+0.5
3,701,209	+		LRK54_RS16925	0.49	+0.2
3,701,209	+		LRK54_RS16925	0.49	-0.8
3,701,209	+		LRK54_RS16925	0.49	+1.1
3,701,209	+		LRK54_RS16925	0.49	+0.0
3,701,209	+		LRK54_RS16925	0.49	-0.8
3,701,209	+		LRK54_RS16925	0.49	+1.3
3,701,209	+		LRK54_RS16925	0.49	-0.4
3,701,209	+		LRK54_RS16925	0.49	-0.6
3,701,210	-		LRK54_RS16925	0.49	+2.5
3,701,210	-		LRK54_RS16925	0.49	-0.4
3,701,210	-		LRK54_RS16925	0.49	+0.7
3,701,210	-		LRK54_RS16925	0.49	-0.7
3,701,210	-		LRK54_RS16925	0.49	-0.7
3,701,210	-		LRK54_RS16925	0.49	-0.3
3,701,210	-		LRK54_RS16925	0.49	-2.0
3,701,210	-		LRK54_RS16925	0.49	-1.2
3,701,505	+		LRK54_RS16925	0.63	-1.8
3,701,505	+		LRK54_RS16925	0.63	+1.5
3,701,505	+		LRK54_RS16925	0.63	-2.3
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3,702,278	+				-0.8
3,702,278	+				-1.1
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