Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS15325

Experiment: R2A with Chromium(III) Chloride Hexahydrate 0.078125 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chromium(III) Chloride Hexahydrate 0.078125 mM
3,383,512	+				-1.8
3,383,512	+				-0.8
3,383,512	+				-0.0
3,383,512	+				+0.4
3,383,512	+				-0.4
3,383,512	+				-0.1
3,383,512	+				-0.6
3,383,512	+				-1.3
3,383,512	+				+0.4
3,383,513	-				+1.6
3,383,513	-				+0.4
3,383,513	-				-1.7
3,383,513	-				+1.0
3,383,513	-				+0.1
3,383,513	-				-0.6
3,383,513	-				+0.6
3,383,513	-				+0.4
3,383,513	-				-0.3
3,383,513	-				-1.0
3,383,513	-				+0.8
3,383,513	-				+0.0
3,383,513	-				+0.2
3,383,513	-				-0.0
3,383,513	-				-1.1
3,383,513	-				-1.6
3,383,513	-				+1.0
3,383,513	-				+0.1
3,383,513	-				-0.2
3,383,545	+				+0.7
3,383,545	+				-0.6
3,383,545	+				+0.8
3,383,545	+				+1.4
3,383,545	+				+0.2
3,383,545	+				-0.8
3,383,545	+				+0.5
3,383,545	+				-1.7
3,383,545	+				+0.4
3,383,545	+				+0.8
3,383,545	+				+0.2
3,383,545	+				+0.3
3,383,545	+				+0.8
3,383,545	+				+0.8
3,383,545	+				+0.4
3,383,545	+				-1.1
3,383,545	+				-0.9
3,383,545	+				-0.1
3,383,545	+				-0.2
3,383,545	+				-0.2
3,383,545	+				-2.8
3,383,545	+				+1.1
3,383,546	-				-0.2
3,383,546	-				+0.9
3,383,546	-				-1.5
3,383,546	-				-0.7
3,383,546	-				-0.7
3,383,546	-				+0.8
3,383,546	-				-1.4
3,383,546	-				-1.5
3,383,548	+				-0.5
3,383,548	+				+0.7
3,383,548	+				+0.0
3,383,549	-				+0.6
3,383,549	-				+0.4
3,383,549	-				-2.9
3,383,549	-				-0.3
3,383,549	-				+0.1
3,383,549	-				+0.5
3,383,803	+				+0.5
3,383,803	+				+0.6
3,383,803	+				-0.4
3,383,803	+				-0.9
3,383,803	+				-0.6
3,383,803	+				-0.0
3,383,803	+				+0.5
3,383,803	+				+0.1
3,383,803	+				+0.8
3,383,804	-				+0.6
3,383,804	-				-1.9
3,383,804	-				-3.0
3,383,804	-				+2.4
3,383,804	-				-1.4
3,383,804	-				-2.4
3,383,804	-				-0.4
3,383,836	+				+0.1
3,383,836	+				-0.9
3,383,836	+				+0.6
3,383,836	+				+0.9
3,383,836	+				+1.1
3,383,836	+				-2.1
3,383,836	+				-0.7
3,383,836	+				+0.3
3,383,836	+				-0.4
3,383,836	+				-1.0
3,383,836	+				+0.4
3,383,837	-				+1.8
3,383,837	-				-1.3
3,383,837	-				-0.4
3,383,837	-				-0.5
3,383,837	-				-0.7
3,383,837	-				-1.3
3,383,854	+				-1.0
3,383,869	+				+0.6
3,383,869	+				-0.3
3,383,869	+				-0.3
3,383,869	+				-1.7
3,383,869	+				-0.4
3,383,869	+				-1.2
3,383,869	+				-0.7
3,383,869	+				+1.5
3,383,870	-				-0.7
3,383,870	-				-0.7
3,383,870	-				+1.4
3,383,870	-				-0.4
3,383,870	-				+1.3
3,383,870	-				-0.6
3,383,870	-				+1.1
3,383,870	-				-0.2
3,383,870	-				+0.2
3,383,870	-				+0.3
3,383,870	-				+0.4
3,383,870	-				+0.5
3,383,901	+				-0.1
3,383,902	-		LRK54_RS15315	0.10	-0.7
3,383,905	+		LRK54_RS15315	0.11	+1.8
3,383,905	+		LRK54_RS15315	0.11	-0.5
3,383,905	+		LRK54_RS15315	0.11	+0.3
3,383,905	+		LRK54_RS15315	0.11	-2.3
3,383,905	+		LRK54_RS15315	0.11	+0.3
3,383,905	+		LRK54_RS15315	0.11	+0.3
3,383,905	+		LRK54_RS15315	0.11	-0.6
3,383,905	+		LRK54_RS15315	0.11	-0.2
3,383,905	+		LRK54_RS15315	0.11	+1.8
3,383,905	+		LRK54_RS15315	0.11	-1.7
3,383,905	+		LRK54_RS15315	0.11	-0.4
3,383,905	+		LRK54_RS15315	0.11	-0.5
3,383,905	+		LRK54_RS15315	0.11	-0.7
3,383,906	-		LRK54_RS15315	0.12	-0.9
3,383,906	-		LRK54_RS15315	0.12	-0.4
3,383,906	-		LRK54_RS15315	0.12	-0.2
3,383,906	-		LRK54_RS15315	0.12	+1.7
3,383,906	-		LRK54_RS15315	0.12	-1.5
3,383,906	-		LRK54_RS15315	0.12	-1.8
3,383,906	-		LRK54_RS15315	0.12	-0.5
3,383,906	-		LRK54_RS15315	0.12	+0.4
3,383,906	-		LRK54_RS15315	0.12	+0.3
3,383,906	-		LRK54_RS15315	0.12	-0.2
3,383,906	-		LRK54_RS15315	0.12	+1.4
3,383,906	-		LRK54_RS15315	0.12	-0.3
3,383,906	-		LRK54_RS15315	0.12	-0.9
3,383,906	-		LRK54_RS15315	0.12	-0.4
3,383,906	-		LRK54_RS15315	0.12	-0.3
3,383,906	-		LRK54_RS15315	0.12	+1.2
3,383,906	-		LRK54_RS15315	0.12	-0.4
3,383,906	-		LRK54_RS15315	0.12	-0.8
3,383,906	-		LRK54_RS15315	0.12	-0.3
3,383,917	+		LRK54_RS15315	0.16	-0.1
3,383,917	+		LRK54_RS15315	0.16	+0.8
3,383,917	+		LRK54_RS15315	0.16	-0.8
3,383,917	+		LRK54_RS15315	0.16	-1.5
3,383,917	+		LRK54_RS15315	0.16	-0.8
3,383,917	+		LRK54_RS15315	0.16	-0.3
3,383,917	+		LRK54_RS15315	0.16	+0.9
3,383,917	+		LRK54_RS15315	0.16	+0.2
3,383,917	+		LRK54_RS15315	0.16	+0.5
3,383,918	-		LRK54_RS15315	0.16	+0.1
3,383,918	-		LRK54_RS15315	0.16	-1.7
3,383,918	-		LRK54_RS15315	0.16	-0.4
3,383,918	-		LRK54_RS15315	0.16	-1.0
3,383,918	-		LRK54_RS15315	0.16	+0.0
3,383,918	-		LRK54_RS15315	0.16	-0.3
3,383,918	-		LRK54_RS15315	0.16	-0.4
3,383,918	-		LRK54_RS15315	0.16	-0.7
3,383,945	+		LRK54_RS15315	0.26	-1.2
3,383,945	+		LRK54_RS15315	0.26	-0.3
3,383,945	+		LRK54_RS15315	0.26	-0.5
3,383,945	+		LRK54_RS15315	0.26	+0.7
3,383,945	+		LRK54_RS15315	0.26	-1.3
3,383,945	+		LRK54_RS15315	0.26	-1.3
3,383,945	+		LRK54_RS15315	0.26	-1.5
3,383,945	+		LRK54_RS15315	0.26	-0.4
3,383,945	+		LRK54_RS15315	0.26	-0.5
3,383,945	+		LRK54_RS15315	0.26	+0.1
3,383,945	+		LRK54_RS15315	0.26	-0.0
3,383,945	+		LRK54_RS15315	0.26	-0.5
3,383,945	+		LRK54_RS15315	0.26	-0.6
3,383,946	-		LRK54_RS15315	0.27	-0.6
3,383,946	-		LRK54_RS15315	0.27	+0.8
3,383,946	-		LRK54_RS15315	0.27	-1.0
3,383,946	-		LRK54_RS15315	0.27	-1.2
3,383,946	-		LRK54_RS15315	0.27	+1.7
3,383,946	-		LRK54_RS15315	0.27	-1.3
3,383,946	-		LRK54_RS15315	0.27	-0.5
3,383,956	+		LRK54_RS15315	0.30	-0.8
3,383,956	+		LRK54_RS15315	0.30	-0.6
3,383,956	+		LRK54_RS15315	0.30	-0.0
3,383,956	+		LRK54_RS15315	0.30	+0.1
3,383,957	-		LRK54_RS15315	0.31	-0.0
3,383,957	-		LRK54_RS15315	0.31	-0.1
3,384,111	+		LRK54_RS15315	0.88	-0.1
3,384,111	+		LRK54_RS15315	0.88	-0.9
3,384,117	+				-0.5
3,384,405	+				+0.7
3,384,462	+				+0.9
3,384,463	-				+0.8
3,384,463	-				+0.4
3,384,463	-				+1.2
3,384,463	-				-0.2
3,384,463	-				-1.4
3,384,463	-				-0.6
3,384,463	-				-0.7
3,384,519	-		LRK54_RS15325	0.31	-1.1
3,384,676	+				-1.6
3,384,676	+				-1.3
3,384,677	-				+0.8
3,384,714	+		LRK54_RS15330	0.12	-0.7
3,384,714	+		LRK54_RS15330	0.12	+1.2
3,384,715	-		LRK54_RS15330	0.12	+1.1
3,384,746	-		LRK54_RS15330	0.18	+1.1
3,384,838	+		LRK54_RS15330	0.37	-1.7
3,384,838	+		LRK54_RS15330	0.37	-0.9
3,384,838	+		LRK54_RS15330	0.37	-1.1
3,384,839	-		LRK54_RS15330	0.37	-0.7
3,384,839	-		LRK54_RS15330	0.37	-1.2
3,384,839	-		LRK54_RS15330	0.37	-1.6
3,384,840	+		LRK54_RS15330	0.37	-1.5
3,384,840	+		LRK54_RS15330	0.37	+0.4
3,384,841	-		LRK54_RS15330	0.37	-0.9
3,384,850	-		LRK54_RS15330	0.39	-0.2
3,384,921	+		LRK54_RS15330	0.53	-1.3
3,384,921	+		LRK54_RS15330	0.53	-0.2
3,384,922	-		LRK54_RS15330	0.53	-0.7
3,384,922	-		LRK54_RS15330	0.53	+0.8
3,384,928	+		LRK54_RS15330	0.55	-1.6
3,384,929	-		LRK54_RS15330	0.55	+0.0
3,384,964	+		LRK54_RS15330	0.62	-2.0
3,384,969	+		LRK54_RS15330	0.63	-0.4
3,384,974	+		LRK54_RS15330	0.64	+1.4
3,384,974	+		LRK54_RS15330	0.64	+1.8
3,384,975	-		LRK54_RS15330	0.64	-0.4
3,384,975	-		LRK54_RS15330	0.64	-0.6
3,384,975	-		LRK54_RS15330	0.64	-1.5
3,384,975	-		LRK54_RS15330	0.64	+1.8
3,384,975	-		LRK54_RS15330	0.64	-1.7
3,385,045	+		LRK54_RS15330	0.78	+1.9
3,385,076	-		LRK54_RS15330	0.84	-1.0
3,385,120	-				+0.8
3,385,155	-				-0.8
3,385,178	+				-0.9
3,385,188	+				+3.0
3,385,189	-				+0.1
3,385,194	+				-0.6
3,385,194	+				-1.8
3,385,196	+				-0.2
3,385,197	-				-2.0
3,385,231	+				-0.9
3,385,232	-				+1.4
3,385,232	-				-1.0
3,385,232	-				-0.4
3,385,232	-				-0.3
3,385,233	+				+0.3
3,385,234	-				-2.0
3,385,235	-				-1.0
3,385,248	-				-0.2
3,385,266	-				-0.0
3,385,266	-				-0.7
3,385,266	-				-0.5
3,385,267	+				+0.4
3,385,268	-				-0.4
3,385,268	-				+0.4
3,385,269	+				-0.4
3,385,269	+				-0.9
3,385,269	+				+0.2
3,385,269	+				-2.2
3,385,270	-				+1.7
3,385,270	-				+0.3
3,385,317	+		LRK54_RS15335	0.18	-0.0
3,385,328	+		LRK54_RS15335	0.20	+0.8
3,385,331	-		LRK54_RS15335	0.21	+0.2
3,385,331	-		LRK54_RS15335	0.21	-0.6
3,385,332	+		LRK54_RS15335	0.21	-0.8
3,385,333	-		LRK54_RS15335	0.21	-1.8
3,385,333	-		LRK54_RS15335	0.21	-1.0
3,385,363	+		LRK54_RS15335	0.28	-1.4
3,385,363	+		LRK54_RS15335	0.28	+0.3
3,385,365	+		LRK54_RS15335	0.28	-2.1
3,385,365	+		LRK54_RS15335	0.28	+0.3
3,385,365	+		LRK54_RS15335	0.28	-0.2
3,385,365	+		LRK54_RS15335	0.28	-0.0
3,385,366	-		LRK54_RS15335	0.28	-0.5
3,385,366	-		LRK54_RS15335	0.28	+0.4
3,385,375	-		LRK54_RS15335	0.30	-1.0
3,385,381	+		LRK54_RS15335	0.32	+0.2
3,385,381	+		LRK54_RS15335	0.32	+0.2
3,385,382	-		LRK54_RS15335	0.32	-1.2
3,385,382	-		LRK54_RS15335	0.32	-0.2
3,385,382	-		LRK54_RS15335	0.32	-1.4
3,385,466	+		LRK54_RS15335	0.50	+0.9
3,385,467	-		LRK54_RS15335	0.50	-1.2
3,385,651	-		LRK54_RS15335	0.90	+1.4