Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS11830

Experiment: R2A with Chromium(III) Chloride Hexahydrate 0.078125 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chromium(III) Chloride Hexahydrate 0.078125 mM
2,619,834	+		LRK54_RS11820	0.85	-0.8
2,619,835	-		LRK54_RS11820	0.85	+0.0
2,619,835	-		LRK54_RS11820	0.85	+1.0
2,619,835	-		LRK54_RS11820	0.85	+0.7
2,619,835	-		LRK54_RS11820	0.85	-1.3
2,619,835	-		LRK54_RS11820	0.85	+0.9
2,619,849	+		LRK54_RS11820	0.86	+0.7
2,619,849	+		LRK54_RS11820	0.86	+0.3
2,619,849	+		LRK54_RS11820	0.86	+0.7
2,619,849	+		LRK54_RS11820	0.86	-0.2
2,619,849	+		LRK54_RS11820	0.86	+1.9
2,619,849	+		LRK54_RS11820	0.86	+0.3
2,619,849	+		LRK54_RS11820	0.86	-0.5
2,619,849	+		LRK54_RS11820	0.86	-0.3
2,619,849	+		LRK54_RS11820	0.86	+1.2
2,619,849	+		LRK54_RS11820	0.86	+0.7
2,619,849	+		LRK54_RS11820	0.86	+1.0
2,619,849	+		LRK54_RS11820	0.86	+1.0
2,619,849	+		LRK54_RS11820	0.86	+1.1
2,619,849	+		LRK54_RS11820	0.86	+0.5
2,619,849	+		LRK54_RS11820	0.86	+0.0
2,619,849	+		LRK54_RS11820	0.86	+0.1
2,619,849	+		LRK54_RS11820	0.86	+0.8
2,619,849	+		LRK54_RS11820	0.86	+0.7
2,619,849	+		LRK54_RS11820	0.86	+0.4
2,619,849	+		LRK54_RS11820	0.86	+0.3
2,619,849	+		LRK54_RS11820	0.86	+0.3
2,619,849	+		LRK54_RS11820	0.86	-0.2
2,619,849	+		LRK54_RS11820	0.86	-1.0
2,619,850	-		LRK54_RS11820	0.86	+0.2
2,619,850	-		LRK54_RS11820	0.86	-0.7
2,619,850	-		LRK54_RS11820	0.86	-1.5
2,619,850	-		LRK54_RS11820	0.86	-0.8
2,619,850	-		LRK54_RS11820	0.86	+0.9
2,619,850	-		LRK54_RS11820	0.86	+1.5
2,619,850	-		LRK54_RS11820	0.86	-0.8
2,619,850	-		LRK54_RS11820	0.86	+1.4
2,619,850	-		LRK54_RS11820	0.86	+3.1
2,619,850	-		LRK54_RS11820	0.86	-0.4
2,619,850	-		LRK54_RS11820	0.86	-0.5
2,619,850	-		LRK54_RS11820	0.86	+0.3
2,619,850	-		LRK54_RS11820	0.86	+0.5
2,619,850	-		LRK54_RS11820	0.86	+0.4
2,619,850	-		LRK54_RS11820	0.86	-0.3
2,619,850	-		LRK54_RS11820	0.86	+0.6
2,619,850	-		LRK54_RS11820	0.86	-0.7
2,619,850	-		LRK54_RS11820	0.86	+0.5
2,619,850	-		LRK54_RS11820	0.86	-1.1
2,619,850	-		LRK54_RS11820	0.86	+0.2
2,619,850	-		LRK54_RS11820	0.86	+0.7
2,619,905	+				-0.1
2,619,905	+				+0.6
2,619,906	-				-1.1
2,619,906	-				+0.7
2,619,981	+				+1.3
2,619,981	+				+0.8
2,619,981	+				+2.5
2,619,981	+				-0.8
2,619,981	+				+0.6
2,619,981	+				+0.1
2,619,981	+				-0.3
2,619,981	+				+0.0
2,619,981	+				+1.0
2,619,981	+				+1.3
2,619,982	-				+0.8
2,619,982	-				+1.3
2,619,982	-				+0.1
2,619,982	-				+0.8
2,619,982	-				+0.0
2,619,982	-				+0.5
2,619,982	-				+0.4
2,619,982	-				-0.7
2,619,982	-				-0.1
2,619,982	-				+1.1
2,619,983	+				+1.1
2,619,984	-				+0.7
2,620,005	+				-1.2
2,620,005	+				+1.6
2,620,005	+				+0.1
2,620,005	+				+1.9
2,620,005	+				+0.3
2,620,005	+				-0.1
2,620,005	+				+0.9
2,620,005	+				+0.6
2,620,005	+				+0.9
2,620,005	+				+1.8
2,620,005	+				+0.2
2,620,005	+				+1.5
2,620,005	+				+0.2
2,620,005	+				+0.2
2,620,005	+				-0.9
2,620,005	+				+0.7
2,620,006	-				+0.1
2,620,006	-				+1.1
2,620,006	-				+1.2
2,620,006	-				+0.0
2,620,006	-				+0.8
2,620,006	-				+0.8
2,620,006	-				+0.7
2,620,006	-				+1.8
2,620,006	-				-0.7
2,620,006	-				-0.5
2,620,006	-				+0.4
2,620,006	-				+1.3
2,620,006	-				+0.1
2,620,006	-				+2.3
2,620,006	-				-0.5
2,620,006	-				+0.1
2,620,006	-				-0.2
2,620,006	-				+0.7
2,620,006	-				-0.8
2,620,006	-				-0.4
2,620,319	-		LRK54_RS11825	0.33	-0.8
2,620,319	-		LRK54_RS11825	0.33	-2.3
2,620,369	+		LRK54_RS11825	0.40	+0.3
2,620,369	+		LRK54_RS11825	0.40	-1.0
2,620,369	+		LRK54_RS11825	0.40	-1.1
2,620,369	+		LRK54_RS11825	0.40	-1.1
2,620,370	-		LRK54_RS11825	0.40	-1.5
2,620,370	-		LRK54_RS11825	0.40	+0.2
2,620,370	-		LRK54_RS11825	0.40	-1.3
2,620,370	-		LRK54_RS11825	0.40	+0.8
2,620,370	-		LRK54_RS11825	0.40	+0.4
2,620,370	-		LRK54_RS11825	0.40	-1.4
2,620,370	-		LRK54_RS11825	0.40	+0.7
2,620,370	-		LRK54_RS11825	0.40	+0.5
2,620,399	+		LRK54_RS11825	0.45	-0.3
2,620,399	+		LRK54_RS11825	0.45	+0.2
2,620,399	+		LRK54_RS11825	0.45	-0.5
2,620,399	+		LRK54_RS11825	0.45	-0.4
2,620,399	+		LRK54_RS11825	0.45	-0.6
2,620,399	+		LRK54_RS11825	0.45	+0.7
2,620,399	+		LRK54_RS11825	0.45	-0.9
2,620,399	+		LRK54_RS11825	0.45	-0.8
2,620,400	-		LRK54_RS11825	0.45	-0.0
2,620,400	-		LRK54_RS11825	0.45	-0.7
2,620,400	-		LRK54_RS11825	0.45	-0.2
2,620,400	-		LRK54_RS11825	0.45	-0.5
2,620,400	-		LRK54_RS11825	0.45	-1.7
2,620,400	-		LRK54_RS11825	0.45	+0.3
2,620,400	-		LRK54_RS11825	0.45	-1.1
2,620,400	-		LRK54_RS11825	0.45	-1.2
2,620,400	-		LRK54_RS11825	0.45	+0.7
2,620,400	-		LRK54_RS11825	0.45	+0.3
2,620,400	-		LRK54_RS11825	0.45	+0.1
2,620,401	+		LRK54_RS11825	0.45	-0.6
2,620,401	+		LRK54_RS11825	0.45	+1.4
2,620,401	+		LRK54_RS11825	0.45	+0.0
2,620,401	+		LRK54_RS11825	0.45	-0.9
2,620,401	+		LRK54_RS11825	0.45	-1.1
2,620,401	+		LRK54_RS11825	0.45	-1.1
2,620,401	+		LRK54_RS11825	0.45	+0.3
2,620,401	+		LRK54_RS11825	0.45	+0.0
2,620,401	+		LRK54_RS11825	0.45	+0.5
2,620,401	+		LRK54_RS11825	0.45	+0.7
2,620,401	+		LRK54_RS11825	0.45	-0.5
2,620,401	+		LRK54_RS11825	0.45	-0.5
2,620,401	+		LRK54_RS11825	0.45	-1.5
2,620,401	+		LRK54_RS11825	0.45	+0.2
2,620,401	+		LRK54_RS11825	0.45	-1.0
2,620,401	+		LRK54_RS11825	0.45	-1.0
2,620,401	+		LRK54_RS11825	0.45	-2.5
2,620,401	+		LRK54_RS11825	0.45	+0.9
2,620,401	+		LRK54_RS11825	0.45	+2.3
2,620,401	+		LRK54_RS11825	0.45	+0.6
2,620,401	+		LRK54_RS11825	0.45	-0.8
2,620,401	+		LRK54_RS11825	0.45	+1.2
2,620,401	+		LRK54_RS11825	0.45	-1.5
2,620,401	+		LRK54_RS11825	0.45	-0.9
2,620,401	+		LRK54_RS11825	0.45	-0.1
2,620,401	+		LRK54_RS11825	0.45	-0.5
2,620,401	+		LRK54_RS11825	0.45	-1.6
2,620,401	+		LRK54_RS11825	0.45	-1.4
2,620,401	+		LRK54_RS11825	0.45	+0.9
2,620,402	-		LRK54_RS11825	0.45	+0.6
2,620,402	-		LRK54_RS11825	0.45	+0.9
2,620,402	-		LRK54_RS11825	0.45	-0.0
2,620,402	-		LRK54_RS11825	0.45	-1.5
2,620,402	-		LRK54_RS11825	0.45	+0.1
2,620,402	-		LRK54_RS11825	0.45	-1.3
2,620,402	-		LRK54_RS11825	0.45	-1.0
2,620,402	-		LRK54_RS11825	0.45	+1.5
2,620,402	-		LRK54_RS11825	0.45	+0.5
2,620,402	-		LRK54_RS11825	0.45	-0.3
2,620,402	-		LRK54_RS11825	0.45	-0.3
2,620,402	-		LRK54_RS11825	0.45	-2.4
2,620,402	-		LRK54_RS11825	0.45	-0.4
2,620,402	-		LRK54_RS11825	0.45	+0.2
2,620,402	-		LRK54_RS11825	0.45	-1.5
2,620,402	-		LRK54_RS11825	0.45	-0.2
2,620,402	-		LRK54_RS11825	0.45	+0.5
2,620,402	-		LRK54_RS11825	0.45	-2.9
2,620,402	-		LRK54_RS11825	0.45	-1.4
2,620,402	-		LRK54_RS11825	0.45	+0.0
2,620,402	-		LRK54_RS11825	0.45	-1.8
2,620,402	-		LRK54_RS11825	0.45	+1.0
2,620,402	-		LRK54_RS11825	0.45	-0.3
2,620,844	+				+1.3
2,620,844	+				-1.2
2,620,844	+				-1.5
2,620,844	+				+0.7
2,620,844	+				-1.3
2,620,845	-				-1.2
2,620,845	-				-1.6
2,620,845	-				+0.4
2,620,845	-				-0.1
2,620,845	-				+0.5
2,620,981	+				-0.3
2,620,982	-				-0.3
2,620,986	+				+0.7
2,620,986	+				-1.8
2,620,986	+				-0.7
2,620,986	+				-2.0
2,620,987	-				-0.6
2,620,987	-				-2.7
2,620,987	-				-1.2
2,620,987	-				-1.1
2,620,987	-				-1.3
2,620,987	-				+0.7
2,621,048	+				-1.3
2,621,048	+				+0.7
2,621,048	+				+0.4
2,621,048	+				-2.0
2,621,048	+				-0.5
2,621,048	+				+1.6
2,621,048	+				+0.9
2,621,048	+				-1.3
2,621,048	+				-3.0
2,621,048	+				-0.7
2,621,048	+				-1.0
2,621,048	+				+0.0
2,621,048	+				-1.3
2,621,048	+				-0.7
2,621,048	+				-2.0
2,621,048	+				-1.2
2,621,048	+				-1.3
2,621,048	+				-1.2
2,621,048	+				-2.1
2,621,048	+				-1.3
2,621,048	+				-1.4
2,621,048	+				-0.5
2,621,048	+				-1.1
2,621,048	+				-0.8
2,621,048	+				+1.1
2,621,048	+				-1.4
2,621,048	+				-0.6
2,621,048	+				+0.9
2,621,048	+				-2.3
2,621,048	+				-1.3
2,621,048	+				-0.6
2,621,048	+				-0.7
2,621,049	-				-1.5
2,621,049	-				-2.1
2,621,049	-				-0.7
2,621,049	-				-0.8
2,621,049	-				-0.8
2,621,049	-				-0.6
2,621,049	-				-0.5
2,621,049	-				+1.3
2,621,049	-				+0.1
2,621,049	-				-0.3
2,621,049	-				-1.5
2,621,049	-				-0.4
2,621,049	-				-1.9
2,621,049	-				-0.3
2,621,049	-				+0.7
2,621,049	-				+0.7
2,621,049	-				+1.0
2,621,049	-				+0.0
2,621,049	-				-0.3
2,621,049	-				-0.5
2,621,049	-				-1.4
2,621,049	-				-0.3
2,621,049	-				-0.5
2,621,108	+		LRK54_RS11830	0.11	-1.8
2,621,108	+		LRK54_RS11830	0.11	+1.3
2,621,108	+		LRK54_RS11830	0.11	-1.6
2,621,108	+		LRK54_RS11830	0.11	-0.3
2,621,108	+		LRK54_RS11830	0.11	-1.5
2,621,108	+		LRK54_RS11830	0.11	-0.3
2,621,108	+		LRK54_RS11830	0.11	-1.1
2,621,108	+		LRK54_RS11830	0.11	-2.6
2,621,108	+		LRK54_RS11830	0.11	-2.3
2,621,108	+		LRK54_RS11830	0.11	-1.4
2,621,108	+		LRK54_RS11830	0.11	-2.5
2,621,108	+		LRK54_RS11830	0.11	-0.6
2,621,108	+		LRK54_RS11830	0.11	-0.2
2,621,108	+		LRK54_RS11830	0.11	-0.5
2,621,108	+		LRK54_RS11830	0.11	-0.7
2,621,108	+		LRK54_RS11830	0.11	-2.0
2,621,108	+		LRK54_RS11830	0.11	-2.0
2,621,108	+		LRK54_RS11830	0.11	-1.4
2,621,108	+		LRK54_RS11830	0.11	+1.1
2,621,108	+		LRK54_RS11830	0.11	+1.0
2,621,108	+		LRK54_RS11830	0.11	+0.7
2,621,108	+		LRK54_RS11830	0.11	-0.4
2,621,108	+		LRK54_RS11830	0.11	-0.3
2,621,108	+		LRK54_RS11830	0.11	-1.4
2,621,108	+		LRK54_RS11830	0.11	+0.1
2,621,108	+		LRK54_RS11830	0.11	-0.7
2,621,109	-		LRK54_RS11830	0.11	-1.1
2,621,109	-		LRK54_RS11830	0.11	-1.6
2,621,109	-		LRK54_RS11830	0.11	+0.0
2,621,109	-		LRK54_RS11830	0.11	-1.3
2,621,109	-		LRK54_RS11830	0.11	-1.8
2,621,109	-		LRK54_RS11830	0.11	-0.5
2,621,109	-		LRK54_RS11830	0.11	+0.4
2,621,109	-		LRK54_RS11830	0.11	+0.7
2,621,109	-		LRK54_RS11830	0.11	-0.5
2,621,109	-		LRK54_RS11830	0.11	-1.1
2,621,109	-		LRK54_RS11830	0.11	-2.3
2,621,109	-		LRK54_RS11830	0.11	-0.9
2,621,109	-		LRK54_RS11830	0.11	-1.1
2,621,109	-		LRK54_RS11830	0.11	-0.1
2,621,109	-		LRK54_RS11830	0.11	-1.3
2,621,109	-		LRK54_RS11830	0.11	+0.1
2,621,109	-		LRK54_RS11830	0.11	+0.0
2,621,109	-		LRK54_RS11830	0.11	-1.4
2,621,109	-		LRK54_RS11830	0.11	-0.8
2,621,109	-		LRK54_RS11830	0.11	-0.6
2,621,109	-		LRK54_RS11830	0.11	-0.9
2,621,285	+		LRK54_RS11830	0.18	+0.0
2,621,285	+		LRK54_RS11830	0.18	+0.5
2,621,285	+		LRK54_RS11830	0.18	-1.7
2,621,285	+		LRK54_RS11830	0.18	+2.3
2,621,285	+		LRK54_RS11830	0.18	+1.3
2,621,285	+		LRK54_RS11830	0.18	-1.1
2,621,286	-		LRK54_RS11830	0.18	-1.6
2,621,286	-		LRK54_RS11830	0.18	-1.3
2,621,286	-		LRK54_RS11830	0.18	-1.7
2,621,286	-		LRK54_RS11830	0.18	-0.3
2,621,286	-		LRK54_RS11830	0.18	-0.8
2,621,286	-		LRK54_RS11830	0.18	-0.6
2,621,363	-		LRK54_RS11830	0.21	+0.0
2,621,534	+		LRK54_RS11830	0.28	-0.4
2,621,534	+		LRK54_RS11830	0.28	-2.7
2,621,534	+		LRK54_RS11830	0.28	-1.1
2,621,534	+		LRK54_RS11830	0.28	-0.8
2,621,534	+		LRK54_RS11830	0.28	-0.8
2,621,535	-		LRK54_RS11830	0.28	-1.3
2,621,535	-		LRK54_RS11830	0.28	+0.6
2,621,535	-		LRK54_RS11830	0.28	-1.1
2,621,535	-		LRK54_RS11830	0.28	+0.5
2,621,535	-		LRK54_RS11830	0.28	+1.6
2,621,535	-		LRK54_RS11830	0.28	-0.5
2,621,535	-		LRK54_RS11830	0.28	-0.3
2,621,535	-		LRK54_RS11830	0.28	-0.2
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