Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS10150

Experiment: R2A with Chromium(III) Chloride Hexahydrate 0.078125 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chromium(III) Chloride Hexahydrate 0.078125 mM
2,230,096	+		LRK54_RS10145	0.29	-0.6
2,230,096	+		LRK54_RS10145	0.29	-0.0
2,230,096	+		LRK54_RS10145	0.29	+0.2
2,230,096	+		LRK54_RS10145	0.29	-0.0
2,230,096	+		LRK54_RS10145	0.29	+2.0
2,230,096	+		LRK54_RS10145	0.29	-0.4
2,230,096	+		LRK54_RS10145	0.29	+0.3
2,230,097	-		LRK54_RS10145	0.29	-0.8
2,230,300	+		LRK54_RS10145	0.46	-0.5
2,230,300	+		LRK54_RS10145	0.46	-0.4
2,230,300	+		LRK54_RS10145	0.46	+0.1
2,230,300	+		LRK54_RS10145	0.46	-0.9
2,230,301	-		LRK54_RS10145	0.46	+1.4
2,230,514	+		LRK54_RS10145	0.64	-0.6
2,230,514	+		LRK54_RS10145	0.64	-0.4
2,230,514	+		LRK54_RS10145	0.64	-0.4
2,230,514	+		LRK54_RS10145	0.64	+0.1
2,230,514	+		LRK54_RS10145	0.64	-0.5
2,230,515	-		LRK54_RS10145	0.64	-0.4
2,230,515	-		LRK54_RS10145	0.64	+1.2
2,230,515	-		LRK54_RS10145	0.64	-1.7
2,230,763	-		LRK54_RS10145	0.86	+1.2
2,230,817	+				+0.7
2,230,817	+				-0.6
2,230,817	+				-0.3
2,230,817	+				-0.4
2,230,817	+				+1.4
2,230,817	+				+1.3
2,230,817	+				-0.4
2,230,817	+				-0.2
2,230,817	+				-0.1
2,230,817	+				+0.1
2,230,817	+				+0.3
2,230,817	+				-1.2
2,230,817	+				+0.8
2,230,817	+				-0.1
2,230,817	+				+0.3
2,230,817	+				-0.0
2,230,817	+				+0.7
2,230,817	+				-1.2
2,230,817	+				+0.1
2,230,817	+				+0.1
2,230,817	+				-1.0
2,230,817	+				-1.1
2,230,817	+				-0.6
2,230,818	-				+0.1
2,230,818	-				-1.5
2,230,818	-				-1.3
2,230,818	-				+0.2
2,230,818	-				-0.8
2,230,818	-				-0.4
2,230,818	-				+0.1
2,230,818	-				+0.1
2,230,818	-				-0.3
2,230,818	-				+0.2
2,230,818	-				+3.1
2,230,818	-				+0.6
2,230,818	-				-0.2
2,230,818	-				-1.1
2,230,818	-				-0.3
2,230,818	-				-0.4
2,230,824	+				+2.2
2,230,999	+				-0.2
2,230,999	+				-0.3
2,230,999	+				+0.1
2,230,999	+				-1.1
2,230,999	+				-0.0
2,230,999	+				+0.4
2,230,999	+				+0.1
2,230,999	+				-0.7
2,230,999	+				-0.2
2,230,999	+				-0.9
2,230,999	+				-0.6
2,230,999	+				-0.7
2,230,999	+				+0.9
2,230,999	+				-0.2
2,230,999	+				+0.6
2,230,999	+				+0.8
2,231,001	+				-0.7
2,231,001	+				+1.2
2,231,001	+				+0.4
2,231,001	+				-0.7
2,231,001	+				+0.7
2,231,001	+				-1.2
2,231,001	+				+0.6
2,231,001	+				-0.2
2,231,001	+				+0.5
2,231,001	+				-0.5
2,231,001	+				-0.4
2,231,001	+				+1.7
2,231,001	+				-0.2
2,231,001	+				-0.4
2,231,001	+				+0.7
2,231,001	+				+0.3
2,231,001	+				-0.2
2,231,001	+				+0.2
2,231,001	+				+1.0
2,231,001	+				+0.1
2,231,001	+				+0.4
2,231,001	+				-1.2
2,231,001	+				+0.4
2,231,001	+				+0.7
2,231,001	+				+0.1
2,231,001	+				+0.0
2,231,001	+				+0.3
2,231,001	+				+0.1
2,231,001	+				+1.2
2,231,001	+				+0.1
2,231,001	+				+1.6
2,231,001	+				-1.1
2,231,001	+				-1.2
2,231,001	+				-1.3
2,231,001	+				-2.5
2,231,001	+				+0.6
2,231,001	+				-0.7
2,231,001	+				+0.4
2,231,001	+				-0.0
2,231,001	+				-0.5
2,231,001	+				-0.2
2,231,001	+				-0.4
2,231,001	+				-0.2
2,231,001	+				-0.7
2,231,001	+				-0.2
2,231,001	+				-0.2
2,231,001	+				-0.5
2,231,001	+				-0.4
2,231,001	+				+0.2
2,231,001	+				-1.5
2,231,001	+				+0.1
2,231,001	+				-0.2
2,231,001	+				+0.2
2,231,001	+				+0.1
2,231,003	+				+1.6
2,231,003	+				-1.0
2,231,003	+				-0.7
2,231,003	+				-0.2
2,231,003	+				-0.8
2,231,003	+				-0.7
2,231,003	+				+0.4
2,231,003	+				+0.7
2,231,003	+				+0.2
2,231,003	+				+0.0
2,231,003	+				-0.7
2,231,003	+				-0.0
2,231,003	+				-0.6
2,231,003	+				-0.2
2,231,003	+				+0.9
2,231,003	+				+0.3
2,231,003	+				-0.1
2,231,003	+				+0.3
2,231,003	+				+0.0
2,231,003	+				-0.7
2,231,003	+				-0.1
2,231,003	+				+0.3
2,231,003	+				-0.8
2,231,003	+				-0.9
2,231,003	+				-1.9
2,231,003	+				-0.9
2,231,003	+				-0.4
2,231,003	+				+0.1
2,231,003	+				+0.4
2,231,003	+				+0.5
2,231,003	+				+1.8
2,231,003	+				-1.1
2,231,003	+				+1.8
2,231,003	+				-1.2
2,231,003	+				-0.7
2,231,003	+				-0.5
2,231,003	+				-0.2
2,231,003	+				-0.7
2,231,003	+				-0.8
2,231,003	+				-0.4
2,231,003	+				+0.4
2,231,003	+				-0.9
2,231,003	+				-1.3
2,231,003	+				+0.3
2,231,003	+				-0.4
2,231,003	+				+0.1
2,231,003	+				-0.7
2,231,003	+				-1.0
2,231,003	+				-0.3
2,231,003	+				-1.3
2,231,003	+				+2.4
2,231,003	+				-0.2
2,231,003	+				-1.9
2,231,003	+				-0.0
2,231,003	+				-0.2
2,231,003	+				+0.8
2,231,003	+				+1.1
2,231,003	+				-1.5
2,231,003	+				-0.1
2,231,003	+				-0.4
2,231,003	+				+0.3
2,231,003	+				-0.3
2,231,003	+				-0.2
2,231,003	+				+0.1
2,231,003	+				-0.7
2,231,003	+				-0.1
2,231,003	+				+0.3
2,231,003	+				-0.3
2,231,003	+				+0.4
2,231,003	+				-0.3
2,231,003	+				+1.2
2,231,003	+				+0.1
2,231,003	+				-0.7
2,231,003	+				-0.3
2,231,003	+				-0.7
2,231,003	+				-1.0
2,231,003	+				+0.2
2,231,003	+				-1.1
2,231,003	+				-0.9
2,231,003	+				+0.1
2,231,003	+				+0.1
2,231,003	+				-0.3
2,231,003	+				-0.7
2,231,003	+				-0.2
2,231,003	+				+0.1
2,231,003	+				-1.4
2,231,003	+				-0.3
2,231,003	+				+1.4
2,231,003	+				+0.8
2,231,003	+				+1.4
2,231,003	+				-1.1
2,231,003	+				+0.1
2,231,003	+				-0.8
2,231,003	+				-0.2
2,231,003	+				-0.7
2,231,003	+				-0.2
2,231,003	+				-0.8
2,231,003	+				-0.2
2,231,003	+				+1.6
2,231,003	+				+0.6
2,231,003	+				-1.1
2,231,003	+				+0.9
2,231,003	+				-0.9
2,231,003	+				+1.4
2,231,003	+				-0.6
2,231,003	+				+1.1
2,231,003	+				-0.7
2,231,005	+				-0.1
2,231,005	+				-0.0
2,231,005	+				-0.6
2,231,005	+				+0.8
2,231,005	+				-0.7
2,231,005	+				-1.8
2,231,005	+				-1.2
2,231,005	+				-0.5
2,231,005	+				-0.8
2,231,005	+				+1.8
2,231,005	+				-0.8
2,231,005	+				-0.3
2,231,005	+				+0.8
2,231,005	+				+1.1
2,231,005	+				-0.1
2,231,005	+				+1.7
2,231,005	+				-0.4
2,231,005	+				-0.9
2,231,005	+				+0.8
2,231,005	+				-1.7
2,231,005	+				+0.1
2,231,005	+				+0.6
2,231,005	+				+0.4
2,231,005	+				-1.0
2,231,005	+				+0.6
2,231,005	+				-1.0
2,231,005	+				-0.3
2,231,005	+				+0.2
2,231,005	+				+0.6
2,231,005	+				-0.5
2,231,005	+				+0.4
2,231,005	+				-2.0
2,231,005	+				+0.8
2,231,005	+				-0.5
2,231,005	+				+0.0
2,231,005	+				-0.6
2,231,005	+				+0.2
2,231,005	+				+0.1
2,231,005	+				-0.1
2,231,005	+				+0.4
2,231,005	+				-0.6
2,231,005	+				+2.4
2,231,005	+				+0.0
2,231,005	+				+0.5
2,231,005	+				-1.1
2,231,005	+				-1.6
2,231,005	+				-1.8
2,231,005	+				-0.7
2,231,005	+				-1.8
2,231,005	+				+0.1
2,231,005	+				+0.3
2,231,005	+				-0.4
2,231,005	+				-1.3
2,231,005	+				-0.5
2,231,005	+				-2.2
2,231,005	+				-1.0
2,231,005	+				+0.0
2,231,005	+				-0.6
2,231,005	+				+0.7
2,231,005	+				-0.8
2,231,005	+				+0.1
2,231,005	+				+0.3
2,231,005	+				-0.5
2,231,005	+				-0.1
2,231,005	+				-0.1
2,231,005	+				+0.2
2,231,005	+				-0.1
2,231,005	+				+0.6
2,231,005	+				+0.8
2,231,005	+				+0.3
2,231,005	+				-1.5
2,231,005	+				-1.6
2,233,247	+		LRK54_RS10150	0.88	+0.6
2,233,247	+		LRK54_RS10150	0.88	-0.2
2,233,247	+		LRK54_RS10150	0.88	+0.1
2,233,247	+		LRK54_RS10150	0.88	-0.9
2,233,247	+		LRK54_RS10150	0.88	-0.4
2,234,277	+				+0.4
2,234,277	+				-0.2
2,234,277	+				-0.2
2,234,277	+				+0.8
2,234,277	+				-0.9
2,234,278	-				+0.5
2,234,278	-				-0.4
2,234,278	-				-0.8
2,234,286	+				+0.8
2,234,286	+				-1.4
2,234,286	+				+0.4
2,234,286	+				+0.4
2,234,286	+				+0.1
2,234,286	+				-0.9
2,234,286	+				+0.6
2,234,286	+				+0.3
2,234,286	+				-0.4
2,234,286	+				+0.6
2,234,286	+				-0.6
2,234,286	+				+1.5
2,234,286	+				-2.2
2,234,286	+				-0.0
2,234,287	-				+0.1
2,234,287	-				-0.3
2,234,287	-				+0.2
2,234,287	-				-2.7
2,234,287	-				+0.8
2,234,287	-				+0.2
2,234,287	-				-0.9
2,234,287	-				-0.3
2,234,287	-				-0.3
2,234,287	-				-1.7
2,234,287	-				-0.7
2,234,287	-				+0.6
2,234,287	-				-0.4
2,234,287	-				-0.7
2,234,287	-				-0.4
2,234,287	-				-0.3
2,234,287	-				-1.1
2,234,287	-				+0.4
2,234,287	-				-2.3
2,234,287	-				+1.0
2,234,287	-				-0.5
2,234,287	-				+0.8
2,234,287	-				-1.8
2,234,287	-				-1.5
2,234,287	-				-2.0
2,234,287	-				+0.6