Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS09345

Experiment: R2A with Chromium(III) Chloride Hexahydrate 0.078125 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chromium(III) Chloride Hexahydrate 0.078125 mM
2,045,854	+				+0.5
2,045,854	+				+0.3
2,045,854	+				-1.3
2,045,854	+				+0.2
2,045,854	+				-1.6
2,045,854	+				-0.5
2,045,854	+				-0.4
2,045,854	+				-1.1
2,045,854	+				-0.5
2,045,854	+				-0.9
2,045,854	+				-1.6
2,045,854	+				-1.2
2,045,854	+				-0.5
2,045,854	+				+0.3
2,045,855	-				-0.2
2,045,855	-				+0.3
2,045,855	-				-0.9
2,045,855	-				-0.7
2,045,918	+				-0.4
2,045,918	+				+0.8
2,045,918	+				+0.8
2,045,918	+				-0.8
2,045,918	+				-1.0
2,045,918	+				-0.1
2,045,918	+				-0.3
2,045,918	+				-0.9
2,045,918	+				+2.3
2,045,918	+				-0.1
2,045,918	+				+0.7
2,045,918	+				-2.0
2,045,918	+				-0.5
2,045,918	+				+0.2
2,045,918	+				-1.4
2,045,918	+				-1.9
2,045,918	+				-0.4
2,045,918	+				-1.4
2,045,918	+				-0.9
2,045,918	+				+0.6
2,045,918	+				-0.5
2,045,918	+				-0.7
2,045,918	+				+0.5
2,045,918	+				+0.9
2,045,918	+				+0.2
2,045,918	+				-0.2
2,045,918	+				-1.0
2,045,918	+				+0.2
2,045,918	+				+0.1
2,045,918	+				+0.4
2,045,918	+				+0.1
2,045,918	+				+0.1
2,045,918	+				+0.1
2,045,918	+				-0.5
2,045,918	+				-0.8
2,045,918	+				-0.3
2,045,918	+				-1.3
2,045,918	+				+0.3
2,045,918	+				-0.3
2,045,918	+				-0.1
2,045,918	+				-1.9
2,045,918	+				-0.4
2,045,918	+				+0.2
2,045,918	+				-1.6
2,045,918	+				-1.1
2,045,918	+				-0.9
2,045,918	+				+0.7
2,045,918	+				-1.1
2,045,918	+				-0.3
2,045,918	+				-1.1
2,045,918	+				-0.4
2,045,918	+				+1.5
2,045,918	+				-0.9
2,045,918	+				-0.3
2,045,918	+				-0.2
2,045,918	+				-1.1
2,045,918	+				-0.2
2,045,918	+				+0.4
2,045,918	+				-0.5
2,045,918	+				+0.2
2,045,918	+				-0.3
2,045,919	-				+1.2
2,045,919	-				-2.7
2,045,919	-				-0.5
2,045,919	-				-0.1
2,045,919	-				-0.8
2,045,919	-				+0.1
2,045,919	-				-1.9
2,045,919	-				-1.5
2,045,919	-				-0.4
2,045,919	-				+2.2
2,045,919	-				-0.8
2,045,919	-				-0.4
2,045,919	-				-0.3
2,045,919	-				-0.2
2,045,919	-				-0.2
2,045,919	-				+0.1
2,045,919	-				+0.7
2,045,919	-				+0.8
2,045,919	-				-0.1
2,045,919	-				-0.7
2,045,919	-				-0.3
2,045,919	-				-0.9
2,045,919	-				+0.2
2,045,919	-				+0.7
2,045,919	-				-0.9
2,045,919	-				+0.4
2,045,919	-				-0.4
2,045,919	-				-1.0
2,045,919	-				-2.1
2,045,919	-				+0.5
2,045,919	-				-0.4
2,045,919	-				+0.1
2,045,919	-				+0.6
2,045,919	-				-0.1
2,045,919	-				-0.0
2,045,919	-				-0.2
2,045,919	-				-0.2
2,045,919	-				-0.0
2,045,919	-				+0.4
2,045,919	-				-1.2
2,045,919	-				-0.8
2,045,919	-				+0.5
2,045,919	-				-0.3
2,045,919	-				-1.6
2,045,919	-				+0.2
2,045,919	-				-0.5
2,045,919	-				-0.5
2,045,919	-				-1.2
2,045,919	-				-0.3
2,045,919	-				-0.5
2,045,919	-				-2.6
2,045,919	-				+0.9
2,045,919	-				-0.5
2,045,919	-				-0.5
2,045,919	-				+1.1
2,045,919	-				-0.2
2,045,919	-				+0.0
2,045,919	-				+0.1
2,045,919	-				-0.4
2,045,919	-				-0.3
2,045,919	-				+0.4
2,045,919	-				-0.7
2,045,919	-				-0.7
2,045,919	-				+0.2
2,045,919	-				-1.3
2,045,919	-				-0.6
2,045,919	-				-0.8
2,045,919	-				-0.3
2,045,919	-				+1.7
2,045,919	-				-0.5
2,045,919	-				+0.3
2,045,919	-				-0.9
2,045,919	-				-0.7
2,045,919	-				+0.5
2,045,919	-				-2.4
2,046,002	+				-0.5
2,046,002	+				-0.7
2,046,003	-				+0.5
2,046,051	+				+1.8
2,046,051	+				+1.2
2,046,051	+				-0.9
2,046,051	+				-2.5
2,046,051	+				-0.9
2,046,051	+				-0.4
2,046,051	+				+0.2
2,046,051	+				-2.2
2,046,051	+				-0.9
2,046,051	+				+0.6
2,046,051	+				+0.2
2,046,051	+				-0.2
2,046,051	+				-1.3
2,046,051	+				-1.7
2,046,051	+				-1.4
2,046,051	+				-0.2
2,046,051	+				+0.0
2,046,051	+				+0.2
2,046,051	+				+0.9
2,046,052	-				-0.7
2,046,052	-				-0.2
2,046,052	-				-0.2
2,046,052	-				-0.6
2,046,052	-				+0.5
2,046,052	-				-0.1
2,046,052	-				+0.5
2,046,052	-				-0.6
2,046,052	-				-0.6
2,046,052	-				-0.7
2,046,052	-				+0.5
2,046,052	-				+0.7
2,046,052	-				-1.0
2,046,052	-				-0.2
2,046,052	-				-0.3
2,046,052	-				-0.4
2,046,055	+				-1.1
2,046,055	+				+0.1
2,046,055	+				+0.3
2,046,055	+				+0.5
2,046,055	+				-0.1
2,046,055	+				-0.4
2,046,055	+				-0.7
2,046,056	-				-1.3
2,046,056	-				+0.5
2,046,056	-				-1.0
2,046,056	-				-0.8
2,046,056	-				+0.1
2,046,056	-				-1.4
2,046,056	-				-0.2
2,046,056	-				+0.7
2,046,056	-				-0.9
2,046,056	-				-2.3
2,046,056	-				-0.3
2,046,056	-				-0.1
2,046,056	-				-0.7
2,046,056	-				+1.1
2,046,083	+				-0.0
2,046,084	-				-0.7
2,046,120	+				+0.3
2,046,121	-				-0.2
2,046,122	+				+0.1
2,046,122	+				+1.8
2,046,122	+				-0.3
2,046,122	+				-1.0
2,046,122	+				-0.1
2,046,122	+				-0.9
2,046,122	+				-0.7
2,046,123	-				-1.3
2,046,123	-				+0.7
2,046,123	-				+1.9
2,046,123	-				-0.9
2,046,123	-				+0.3
2,046,123	-				-0.2
2,046,123	-				-0.5
2,046,123	-				+0.1
2,046,143	+				+0.2
2,046,276	+				-1.6
2,046,276	+				+1.3
2,046,276	+				+0.5
2,046,276	+				+0.2
2,046,276	+				-0.4
2,046,276	+				-0.2
2,046,277	-				-0.5
2,046,277	-				+2.7
2,046,277	-				+1.5
2,046,277	-				+0.7
2,046,277	-				-1.1
2,046,277	-				-0.5
2,046,277	-				-0.6
2,046,277	-				-0.8
2,046,277	-				+0.8
2,046,277	-				-1.9
2,046,277	-				-0.8
2,046,277	-				-0.9
2,046,277	-				+0.1
2,046,277	-				-0.2
2,046,347	+				+0.8
2,046,347	+				+1.0
2,046,347	+				-1.7
2,046,347	+				-0.5
2,046,347	+				-1.4
2,046,347	+				-0.5
2,046,347	+				+0.9
2,046,347	+				+2.5
2,046,347	+				+0.8
2,046,347	+				+0.1
2,046,347	+				+1.1
2,046,348	-				+0.1
2,046,348	-				-0.7
2,046,348	-				-1.3
2,046,348	-				-1.8
2,046,348	-				-1.0
2,046,348	-				-1.3
2,046,348	-				+0.7
2,046,348	-				-0.2
2,046,348	-				-0.9
2,046,348	-				-0.5
2,046,348	-				+1.1
2,046,348	-				-0.1
2,046,348	-				-0.9
2,046,348	-				+0.1
2,046,353	+				-0.7
2,046,353	+				-0.0
2,046,354	-				-0.0
2,046,354	-				-1.3
2,046,367	+				-0.3
2,046,367	+				-2.3
2,046,367	+				-0.2
2,046,367	+				+1.5
2,046,367	+				+0.0
2,046,367	+				-0.1
2,046,367	+				-0.1
2,046,367	+				-1.7
2,046,367	+				-2.3
2,046,367	+				+0.9
2,046,367	+				+0.3
2,046,367	+				-0.8
2,046,368	-				+0.1
2,046,368	-				+1.9
2,046,368	-				-0.9
2,046,368	-				-0.7
2,046,368	-				-2.3
2,046,368	-				-0.7
2,046,368	-				+0.2
2,046,368	-				+0.5
2,046,368	-				-0.5
2,046,368	-				+0.8
2,046,368	-				+0.0
2,046,368	-				+1.0
2,046,368	-				+0.2
2,046,382	+				+0.7
2,046,382	+				-0.1
2,046,383	-				+2.5
2,046,383	-				-0.1
2,046,383	-				-0.3
2,046,383	-				+0.2
2,046,383	-				-0.6
2,046,383	-				+0.9
2,046,383	-				-1.1
2,046,402	+				+1.1
2,046,402	+				-1.4
2,046,402	+				-0.1
2,046,402	+				+0.3
2,046,402	+				+0.9
2,046,402	+				-0.5
2,046,402	+				-0.1
2,046,402	+				-0.7
2,046,402	+				-1.4
2,046,402	+				-0.7
2,046,402	+				+1.8
2,046,402	+				-0.1
2,046,402	+				-0.1
2,046,402	+				+0.5
2,046,402	+				-0.3
2,046,402	+				-0.6
2,046,402	+				-1.7
2,046,402	+				+0.9
2,046,402	+				-0.7
2,046,402	+				-0.2
2,046,402	+				+0.8
2,046,402	+				-0.4
2,046,403	-				-0.8
2,046,403	-				-2.1
2,046,403	-				+0.8
2,046,403	-				+0.6
2,046,403	-				-0.1
2,046,403	-				+1.0
2,046,403	-				-0.3
2,046,403	-				+0.2
2,046,403	-				-0.3
2,046,403	-				+0.0
2,046,403	-				-0.3
2,046,403	-				-0.5
2,046,403	-				+0.3
2,046,403	-				+0.8
2,046,403	-				+0.1
2,046,403	-				+0.6
2,046,403	-				+0.8
2,046,403	-				-0.5
2,046,403	-				-1.2
2,046,403	-				-0.4
2,046,403	-				+1.7
2,046,403	-				-1.8
2,046,504	+		LRK54_RS09340	0.38	-0.6
2,046,505	+		LRK54_RS09340	0.38	+0.3
2,046,505	+		LRK54_RS09340	0.38	-0.1
2,046,506	-		LRK54_RS09340	0.38	+0.3
2,046,506	-		LRK54_RS09340	0.38	+0.1
2,046,531	+		LRK54_RS09340	0.47	+0.2
2,046,532	-		LRK54_RS09340	0.47	+0.1
2,046,532	-		LRK54_RS09340	0.47	+0.0
2,046,557	+		LRK54_RS09340	0.56	-0.4
2,046,557	+		LRK54_RS09340	0.56	-0.3
2,046,557	+		LRK54_RS09340	0.56	-0.8
2,046,557	+		LRK54_RS09340	0.56	+0.1
2,046,557	+		LRK54_RS09340	0.56	+0.7
2,046,557	+		LRK54_RS09340	0.56	-1.0
2,046,557	+		LRK54_RS09340	0.56	+0.9
2,046,639	+		LRK54_RS09340	0.85	-0.4
2,046,639	+		LRK54_RS09340	0.85	-0.3
2,046,834	-		LRK54_RS09345	0.12	-1.5
2,046,834	-		LRK54_RS09345	0.12	-0.5
2,046,834	-		LRK54_RS09345	0.12	-0.6
2,046,834	-		LRK54_RS09345	0.12	+2.5
2,046,834	-		LRK54_RS09345	0.12	-2.1
2,047,052	-		LRK54_RS09345	0.29	-2.1
2,047,146	-		LRK54_RS09345	0.37	-0.8
2,047,883	+				-0.7
2,047,884	-				+0.0
2,047,884	-				+0.4
2,047,884	-				+0.6
2,047,884	-				+1.9
2,047,886	-				-1.0
2,047,896	-				+0.4
2,047,896	-				+0.8
2,047,911	-				+0.6
2,048,010	+				-2.3
2,048,010	+				-0.7
2,048,011	-				+0.5
2,048,011	-				+0.1
2,048,011	-				-0.1
2,048,011	-				-1.3
2,048,011	-				-1.9
2,048,011	-				+1.1
2,048,058	+				+0.4
2,048,058	+				+1.2
2,048,058	+				-0.5
2,048,058	+				+0.8
2,048,058	+				-0.3
2,048,059	-				+1.1
2,048,059	-				-1.8
2,048,059	-				-1.1
2,048,059	-				-0.1
2,048,059	-				-0.5
2,048,059	-				+1.5
2,048,094	-				+0.0
2,048,104	+				-1.0
2,048,104	+				+1.7
2,048,104	+				-0.8
2,048,104	+				-0.6
2,048,104	+				+0.6
2,048,104	+				+0.1
2,048,105	-				+0.8
2,048,105	-				-1.1
2,048,105	-				-0.7
2,048,105	-				-0.2
2,048,105	-				-0.6
2,048,105	-				-1.0
2,048,105	-				+1.8
2,048,105	-				-1.0
2,048,105	-				-0.7
2,048,105	-				-0.5
2,048,105	-				-1.9
2,048,151	+		LRK54_RS09350	0.16	+0.1
2,048,151	+		LRK54_RS09350	0.16	+0.0
2,048,152	-		LRK54_RS09350	0.16	-0.1
2,048,152	-		LRK54_RS09350	0.16	+0.9
2,048,168	+		LRK54_RS09350	0.19	+0.8
2,048,169	-		LRK54_RS09350	0.20	+0.5
2,048,184	+		LRK54_RS09350	0.22	-2.4
2,048,184	+		LRK54_RS09350	0.22	-1.5
2,048,184	+		LRK54_RS09350	0.22	-1.0
2,048,184	+		LRK54_RS09350	0.22	-0.7
2,048,185	-		LRK54_RS09350	0.22	+1.2
2,048,185	-		LRK54_RS09350	0.22	+0.9
2,048,185	-		LRK54_RS09350	0.22	-0.5
2,048,185	-		LRK54_RS09350	0.22	-0.1
2,048,185	-		LRK54_RS09350	0.22	+1.9
2,048,185	-		LRK54_RS09350	0.22	-0.9
2,048,185	-		LRK54_RS09350	0.22	-0.4
2,048,185	-		LRK54_RS09350	0.22	+0.6
2,048,185	-		LRK54_RS09350	0.22	-0.8
2,048,185	-		LRK54_RS09350	0.22	-0.4
2,048,203	+		LRK54_RS09350	0.26	-0.5
2,048,203	+		LRK54_RS09350	0.26	-1.1
2,048,318	-		LRK54_RS09350	0.47	-1.4
2,048,341	-		LRK54_RS09350	0.51	-0.7
2,048,365	-		LRK54_RS09350	0.55	-0.3
2,048,436	+		LRK54_RS09350	0.68	+0.4
2,048,436	+		LRK54_RS09350	0.68	-1.0
2,048,436	+		LRK54_RS09350	0.68	+0.1
2,048,436	+		LRK54_RS09350	0.68	-0.6
2,048,436	+		LRK54_RS09350	0.68	-0.1
2,048,437	-		LRK54_RS09350	0.68	+0.3
2,048,437	-		LRK54_RS09350	0.68	+0.6
2,048,437	-		LRK54_RS09350	0.68	-0.8
2,048,437	-		LRK54_RS09350	0.68	-0.2
2,048,437	-		LRK54_RS09350	0.68	-1.1
2,048,437	-		LRK54_RS09350	0.68	-0.6
2,048,449	+		LRK54_RS09350	0.70	+0.5
2,048,449	+		LRK54_RS09350	0.70	-0.4
2,048,449	+		LRK54_RS09350	0.70	-1.1
2,048,449	+		LRK54_RS09350	0.70	+0.2
2,048,449	+		LRK54_RS09350	0.70	-1.4
2,048,449	+		LRK54_RS09350	0.70	-1.2
2,048,449	+		LRK54_RS09350	0.70	-0.9
2,048,449	+		LRK54_RS09350	0.70	-0.2
2,048,449	+		LRK54_RS09350	0.70	-1.8
2,048,449	+		LRK54_RS09350	0.70	-1.4
2,048,449	+		LRK54_RS09350	0.70	-0.0
2,048,449	+		LRK54_RS09350	0.70	-0.2
2,048,449	+		LRK54_RS09350	0.70	-0.2
2,048,449	+		LRK54_RS09350	0.70	+0.1
2,048,450	-		LRK54_RS09350	0.70	+0.5
2,048,450	-		LRK54_RS09350	0.70	+1.5
2,048,450	-		LRK54_RS09350	0.70	-1.8
2,048,450	-		LRK54_RS09350	0.70	-0.9
2,048,450	-		LRK54_RS09350	0.70	-0.3
2,048,450	-		LRK54_RS09350	0.70	+0.4
2,048,450	-		LRK54_RS09350	0.70	+0.2
2,048,450	-		LRK54_RS09350	0.70	+0.3
2,048,450	-		LRK54_RS09350	0.70	-0.6
2,048,450	-		LRK54_RS09350	0.70	+0.1
2,048,450	-		LRK54_RS09350	0.70	-0.3
2,048,460	+		LRK54_RS09350	0.72	-0.5
2,048,460	+		LRK54_RS09350	0.72	+0.2
2,048,460	+		LRK54_RS09350	0.72	-1.2
2,048,461	-		LRK54_RS09350	0.72	+1.0
2,048,461	-		LRK54_RS09350	0.72	-0.3
2,048,461	-		LRK54_RS09350	0.72	-1.2
2,048,461	-		LRK54_RS09350	0.72	-0.4
2,048,461	-		LRK54_RS09350	0.72	+0.6
2,048,461	-		LRK54_RS09350	0.72	+1.1
2,048,461	-		LRK54_RS09350	0.72	-0.6
2,048,461	-		LRK54_RS09350	0.72	-0.3
2,048,578	-				+0.7
2,048,711	+		LRK54_RS09355	0.36	-1.5
2,048,830	+		LRK54_RS09355	0.78	-0.2
2,048,830	+		LRK54_RS09355	0.78	-0.9
2,048,830	+		LRK54_RS09355	0.78	+0.5
2,048,857	+		LRK54_RS09355	0.87	-0.2
2,048,857	+		LRK54_RS09355	0.87	-0.4
2,048,857	+		LRK54_RS09355	0.87	-0.7
2,048,857	+		LRK54_RS09355	0.87	+0.9
2,048,857	+		LRK54_RS09355	0.87	-0.2
2,048,857	+		LRK54_RS09355	0.87	-0.9
2,048,857	+		LRK54_RS09355	0.87	-0.2
2,048,857	+		LRK54_RS09355	0.87	-0.6
2,048,857	+		LRK54_RS09355	0.87	-0.8
2,048,857	+		LRK54_RS09355	0.87	-0.3
2,048,858	-		LRK54_RS09355	0.87	-0.9
2,048,858	-		LRK54_RS09355	0.87	-1.0
2,048,858	-		LRK54_RS09355	0.87	+0.5
2,048,858	-		LRK54_RS09355	0.87	-0.1
2,048,858	-		LRK54_RS09355	0.87	-0.5
2,048,858	-		LRK54_RS09355	0.87	-1.0
2,048,859	+		LRK54_RS09355	0.88	+0.4
2,048,859	+		LRK54_RS09355	0.88	+0.5
2,048,859	+		LRK54_RS09355	0.88	-0.4
2,048,859	+		LRK54_RS09355	0.88	-0.8
2,048,859	+		LRK54_RS09355	0.88	+1.2
2,048,859	+		LRK54_RS09355	0.88	+0.7
2,048,859	+		LRK54_RS09355	0.88	+0.5
2,048,859	+		LRK54_RS09355	0.88	-0.1
2,048,859	+		LRK54_RS09355	0.88	-0.2
2,048,860	-		LRK54_RS09355	0.88	+0.8
2,048,860	-		LRK54_RS09355	0.88	-0.2
2,048,860	-		LRK54_RS09355	0.88	-0.3
2,048,860	-		LRK54_RS09355	0.88	+0.1
2,048,860	-		LRK54_RS09355	0.88	-0.1
2,048,928	-				-0.1