Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS08930

Experiment: R2A with Chromium(III) Chloride Hexahydrate 0.078125 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chromium(III) Chloride Hexahydrate 0.078125 mM
1,944,426	+		LRK54_RS08925	0.77	-0.8
1,944,426	+		LRK54_RS08925	0.77	-0.9
1,944,426	+		LRK54_RS08925	0.77	+0.0
1,944,427	-		LRK54_RS08925	0.77	+1.3
1,944,427	-		LRK54_RS08925	0.77	-0.0
1,944,427	-		LRK54_RS08925	0.77	-0.9
1,944,427	-		LRK54_RS08925	0.77	+0.2
1,944,427	-		LRK54_RS08925	0.77	-0.5
1,944,427	-		LRK54_RS08925	0.77	-0.4
1,944,427	-		LRK54_RS08925	0.77	-1.3
1,944,534	+		LRK54_RS08925	0.80	-0.5
1,944,534	+		LRK54_RS08925	0.80	-1.3
1,944,534	+		LRK54_RS08925	0.80	-1.7
1,944,534	+		LRK54_RS08925	0.80	-1.6
1,944,534	+		LRK54_RS08925	0.80	-0.1
1,944,534	+		LRK54_RS08925	0.80	-0.4
1,944,534	+		LRK54_RS08925	0.80	-0.2
1,944,534	+		LRK54_RS08925	0.80	-0.4
1,944,534	+		LRK54_RS08925	0.80	-0.6
1,944,534	+		LRK54_RS08925	0.80	-1.1
1,944,534	+		LRK54_RS08925	0.80	-0.1
1,944,534	+		LRK54_RS08925	0.80	+1.2
1,944,534	+		LRK54_RS08925	0.80	+0.1
1,944,534	+		LRK54_RS08925	0.80	-0.1
1,944,534	+		LRK54_RS08925	0.80	+0.5
1,944,534	+		LRK54_RS08925	0.80	-0.0
1,944,534	+		LRK54_RS08925	0.80	-2.0
1,944,534	+		LRK54_RS08925	0.80	-1.8
1,944,534	+		LRK54_RS08925	0.80	-0.6
1,944,534	+		LRK54_RS08925	0.80	+0.4
1,944,534	+		LRK54_RS08925	0.80	-0.6
1,944,535	-		LRK54_RS08925	0.80	+0.2
1,944,535	-		LRK54_RS08925	0.80	-0.2
1,944,535	-		LRK54_RS08925	0.80	+1.3
1,944,535	-		LRK54_RS08925	0.80	-0.2
1,944,535	-		LRK54_RS08925	0.80	-0.7
1,944,535	-		LRK54_RS08925	0.80	+0.3
1,944,535	-		LRK54_RS08925	0.80	-1.6
1,944,535	-		LRK54_RS08925	0.80	-0.7
1,944,535	-		LRK54_RS08925	0.80	-1.2
1,944,535	-		LRK54_RS08925	0.80	-0.6
1,944,577	+		LRK54_RS08925	0.81	-0.3
1,944,578	-		LRK54_RS08925	0.81	-0.0
1,944,606	+		LRK54_RS08925	0.82	-2.2
1,944,606	+		LRK54_RS08925	0.82	+0.8
1,944,606	+		LRK54_RS08925	0.82	-1.0
1,944,606	+		LRK54_RS08925	0.82	-0.9
1,944,606	+		LRK54_RS08925	0.82	-0.1
1,944,606	+		LRK54_RS08925	0.82	+0.1
1,944,606	+		LRK54_RS08925	0.82	-0.6
1,944,606	+		LRK54_RS08925	0.82	+1.2
1,944,606	+		LRK54_RS08925	0.82	-0.2
1,944,607	-		LRK54_RS08925	0.82	+1.7
1,944,607	-		LRK54_RS08925	0.82	+0.0
1,944,607	-		LRK54_RS08925	0.82	-0.6
1,944,607	-		LRK54_RS08925	0.82	+1.2
1,944,607	-		LRK54_RS08925	0.82	+2.0
1,944,607	-		LRK54_RS08925	0.82	+0.4
1,944,607	-		LRK54_RS08925	0.82	-1.4
1,944,607	-		LRK54_RS08925	0.82	+0.3
1,944,607	-		LRK54_RS08925	0.82	+0.9
1,944,607	-		LRK54_RS08925	0.82	-1.4
1,944,607	-		LRK54_RS08925	0.82	+0.4
1,944,668	-		LRK54_RS08925	0.84	-1.8
1,944,668	-		LRK54_RS08925	0.84	-0.1
1,944,668	-		LRK54_RS08925	0.84	-0.8
1,944,668	-		LRK54_RS08925	0.84	-0.4
1,944,668	-		LRK54_RS08925	0.84	+0.8
1,944,707	+		LRK54_RS08925	0.85	-0.4
1,944,707	+		LRK54_RS08925	0.85	+0.1
1,944,707	+		LRK54_RS08925	0.85	+0.5
1,944,707	+		LRK54_RS08925	0.85	+0.4
1,944,707	+		LRK54_RS08925	0.85	+0.1
1,944,708	-		LRK54_RS08925	0.85	-0.0
1,944,708	-		LRK54_RS08925	0.85	+0.5
1,944,708	-		LRK54_RS08925	0.85	-0.2
1,944,708	-		LRK54_RS08925	0.85	+0.8
1,944,725	+		LRK54_RS08925	0.86	-0.3
1,944,726	-		LRK54_RS08925	0.86	+0.6
1,944,726	-		LRK54_RS08925	0.86	-0.4
1,944,809	+		LRK54_RS08925	0.88	-1.6
1,944,809	+		LRK54_RS08925	0.88	+0.2
1,944,809	+		LRK54_RS08925	0.88	+0.4
1,944,809	+		LRK54_RS08925	0.88	+1.3
1,944,809	+		LRK54_RS08925	0.88	-1.1
1,944,809	+		LRK54_RS08925	0.88	-0.6
1,944,809	+		LRK54_RS08925	0.88	-0.5
1,944,809	+		LRK54_RS08925	0.88	-1.0
1,944,809	+		LRK54_RS08925	0.88	-0.9
1,944,809	+		LRK54_RS08925	0.88	-1.8
1,944,809	+		LRK54_RS08925	0.88	-0.5
1,944,809	+		LRK54_RS08925	0.88	-2.0
1,944,809	+		LRK54_RS08925	0.88	-3.2
1,944,809	+		LRK54_RS08925	0.88	-0.5
1,944,809	+		LRK54_RS08925	0.88	+0.5
1,944,809	+		LRK54_RS08925	0.88	-0.1
1,944,809	+		LRK54_RS08925	0.88	-0.5
1,944,809	+		LRK54_RS08925	0.88	-2.1
1,944,809	+		LRK54_RS08925	0.88	+0.4
1,944,810	-		LRK54_RS08925	0.88	-0.1
1,944,810	-		LRK54_RS08925	0.88	-0.8
1,944,810	-		LRK54_RS08925	0.88	-0.1
1,944,810	-		LRK54_RS08925	0.88	-1.5
1,944,810	-		LRK54_RS08925	0.88	+0.1
1,944,810	-		LRK54_RS08925	0.88	+0.6
1,944,810	-		LRK54_RS08925	0.88	-0.1
1,944,810	-		LRK54_RS08925	0.88	-0.3
1,944,810	-		LRK54_RS08925	0.88	+0.9
1,944,810	-		LRK54_RS08925	0.88	+0.0
1,944,810	-		LRK54_RS08925	0.88	+0.5
1,944,810	-		LRK54_RS08925	0.88	-0.4
1,944,810	-		LRK54_RS08925	0.88	-0.6
1,945,031	+				+0.0
1,945,031	+				+0.3
1,945,031	+				+0.0
1,945,031	+				+0.1
1,945,031	+				+1.7
1,945,032	-				-1.1
1,945,032	-				-0.9
1,945,032	-				+0.5
1,945,032	-				-0.1
1,945,044	+				+0.7
1,945,044	+				-0.8
1,945,044	+				+0.8
1,945,090	+				-0.0
1,945,090	+				-1.3
1,945,090	+				-0.8
1,945,091	-				+0.9
1,945,091	-				-0.3
1,945,091	-				+0.3
1,945,274	+				-0.1
1,945,275	-				+0.9
1,945,300	+				-1.4
1,945,300	+				+0.1
1,945,300	+				-0.8
1,945,300	+				+0.6
1,945,300	+				-0.5
1,945,300	+				-1.0
1,945,300	+				-1.4
1,945,300	+				-0.7
1,945,300	+				-1.3
1,945,301	-				+0.1
1,945,301	-				-1.4
1,945,301	-				-0.1
1,945,301	-				+0.1
1,945,301	-				-0.4
1,945,301	-				+0.0
1,945,301	-				+1.2
1,945,304	+				-1.3
1,945,304	+				+0.7
1,945,304	+				+0.2
1,945,304	+				-1.6
1,945,304	+				-2.1
1,945,304	+				+0.9
1,945,304	+				-0.9
1,945,304	+				-0.1
1,945,304	+				-0.4
1,945,304	+				-0.7
1,945,304	+				+1.9
1,945,304	+				-0.1
1,945,304	+				+0.9
1,945,304	+				-0.8
1,945,304	+				-0.1
1,945,304	+				-0.3
1,945,304	+				-0.6
1,945,304	+				+1.2
1,945,304	+				+0.3
1,945,304	+				-1.5
1,945,304	+				-2.2
1,945,304	+				-0.5
1,945,304	+				-0.4
1,945,304	+				+1.0
1,945,304	+				+0.5
1,945,304	+				-2.6
1,945,304	+				-0.2
1,945,304	+				+0.1
1,945,304	+				+0.8
1,945,304	+				+0.3
1,945,304	+				-1.7
1,945,304	+				-0.3
1,945,304	+				-0.8
1,945,304	+				+0.5
1,945,304	+				-1.2
1,945,304	+				-1.1
1,945,304	+				+1.2
1,945,304	+				+0.4
1,945,304	+				-0.5
1,945,304	+				-0.3
1,945,304	+				-0.2
1,945,304	+				-1.8
1,945,304	+				-1.0
1,945,304	+				+0.3
1,945,304	+				+0.0
1,945,304	+				-1.2
1,945,304	+				-1.3
1,945,304	+				+0.6
1,945,304	+				-0.7
1,945,304	+				+0.0
1,945,304	+				-2.1
1,945,304	+				-0.8
1,945,304	+				-0.6
1,945,305	-				-1.1
1,945,305	-				-1.1
1,945,305	-				+0.9
1,945,305	-				-0.5
1,945,305	-				-0.9
1,945,305	-				-0.6
1,945,305	-				+0.4
1,945,305	-				+0.2
1,945,305	-				+0.9
1,945,305	-				-1.4
1,945,305	-				-0.2
1,945,305	-				+1.4
1,945,305	-				+1.0
1,945,305	-				+0.1
1,945,305	-				+0.1
1,945,305	-				-0.3
1,945,305	-				-0.2
1,945,305	-				+0.2
1,945,305	-				-0.5
1,945,305	-				+0.4
1,945,305	-				-0.1
1,945,305	-				+2.1
1,945,305	-				-1.1
1,945,305	-				+0.2
1,945,305	-				+0.6
1,945,305	-				-0.4
1,945,305	-				+0.8
1,945,305	-				+0.2
1,945,305	-				+1.7
1,945,305	-				-1.0
1,945,305	-				+1.8
1,945,305	-				+0.2
1,945,305	-				-0.5
1,945,305	-				+0.9
1,945,305	-				-0.9
1,945,305	-				-0.9
1,945,305	-				+0.1
1,945,305	-				-0.9
1,945,305	-				-1.2
1,945,306	-				-0.1
1,945,341	+				+0.0
1,945,341	+				-1.9
1,945,341	+				-0.9
1,945,341	+				-2.4
1,945,341	+				-1.1
1,945,341	+				+0.3
1,945,342	-				-2.1
1,945,342	-				+0.5
1,945,375	+				+0.0
1,945,385	+				-1.1
1,945,402	-				+0.9
1,945,472	+				-1.5
1,945,472	+				-1.1
1,945,592	-		LRK54_RS08930	0.17	-0.8
1,945,592	-		LRK54_RS08930	0.17	+0.5
1,945,592	-		LRK54_RS08930	0.17	-0.7
1,945,592	-		LRK54_RS08930	0.17	+0.4
1,945,592	-		LRK54_RS08930	0.17	-2.1
1,945,706	-		LRK54_RS08930	0.27	+0.2
1,945,706	-		LRK54_RS08930	0.27	-1.9
1,945,706	-		LRK54_RS08930	0.27	-1.2
1,945,706	-		LRK54_RS08930	0.27	-0.6
1,945,706	-		LRK54_RS08930	0.27	-0.4
1,945,706	-		LRK54_RS08930	0.27	-1.5
1,945,706	-		LRK54_RS08930	0.27	-2.2
1,945,706	-		LRK54_RS08930	0.27	-2.9
1,945,712	-		LRK54_RS08930	0.28	-0.6
1,945,712	-		LRK54_RS08930	0.28	-0.5
1,945,712	-		LRK54_RS08930	0.28	-0.3
1,945,712	-		LRK54_RS08930	0.28	-1.4
1,945,885	-		LRK54_RS08930	0.43	-0.7
1,945,885	-		LRK54_RS08930	0.43	-0.2
1,945,911	-		LRK54_RS08930	0.46	-0.6
1,946,056	-		LRK54_RS08930	0.59	-0.6
1,946,417	-				-2.8
1,946,417	-				-1.9
1,946,417	-				+0.5
1,946,417	-				-0.4
1,946,417	-				-0.6
1,946,578	+				+0.3
1,946,579	-				-0.4
1,946,579	-				-1.0
1,946,579	-				+0.9
1,946,622	+		LRK54_RS08935	0.18	+0.0
1,946,622	+		LRK54_RS08935	0.18	-0.5
1,946,622	+		LRK54_RS08935	0.18	+0.7
1,946,622	+		LRK54_RS08935	0.18	-2.9
1,946,622	+		LRK54_RS08935	0.18	+0.3
1,946,622	+		LRK54_RS08935	0.18	-1.1
1,946,622	+		LRK54_RS08935	0.18	+0.3
1,946,623	-		LRK54_RS08935	0.18	+0.1
1,946,623	-		LRK54_RS08935	0.18	-0.6
1,946,623	-		LRK54_RS08935	0.18	-0.4
1,946,623	-		LRK54_RS08935	0.18	+0.5
1,946,623	-		LRK54_RS08935	0.18	-0.1
1,946,623	-		LRK54_RS08935	0.18	-0.6
1,946,623	-		LRK54_RS08935	0.18	+0.5
1,946,623	-		LRK54_RS08935	0.18	-0.4
1,946,623	-		LRK54_RS08935	0.18	+0.1
1,946,623	-		LRK54_RS08935	0.18	+0.6
1,946,623	-		LRK54_RS08935	0.18	+1.4
1,946,623	-		LRK54_RS08935	0.18	-0.7
1,946,623	-		LRK54_RS08935	0.18	+0.1
1,946,623	-		LRK54_RS08935	0.18	-0.5
1,946,623	-		LRK54_RS08935	0.18	+0.3
1,946,633	-		LRK54_RS08935	0.20	-2.2
1,946,633	-		LRK54_RS08935	0.20	+0.3
1,946,633	-		LRK54_RS08935	0.20	-0.5
1,946,755	+		LRK54_RS08935	0.44	+0.7
1,946,755	+		LRK54_RS08935	0.44	-0.9
1,946,755	+		LRK54_RS08935	0.44	-1.4
1,946,755	+		LRK54_RS08935	0.44	-0.3
1,946,755	+		LRK54_RS08935	0.44	-0.5
1,946,755	+		LRK54_RS08935	0.44	-0.9
1,946,755	+		LRK54_RS08935	0.44	-0.2
1,946,755	+		LRK54_RS08935	0.44	+0.2
1,946,755	+		LRK54_RS08935	0.44	-0.3
1,946,755	+		LRK54_RS08935	0.44	-3.0
1,946,755	+		LRK54_RS08935	0.44	+0.2
1,946,755	+		LRK54_RS08935	0.44	-0.2
1,946,755	+		LRK54_RS08935	0.44	-0.3
1,946,755	+		LRK54_RS08935	0.44	+0.8
1,946,755	+		LRK54_RS08935	0.44	-0.0
1,946,755	+		LRK54_RS08935	0.44	+0.4
1,946,756	-		LRK54_RS08935	0.44	-0.1
1,946,756	-		LRK54_RS08935	0.44	+0.0
1,946,756	-		LRK54_RS08935	0.44	+2.5
1,946,756	-		LRK54_RS08935	0.44	+0.2
1,946,756	-		LRK54_RS08935	0.44	-0.7
1,946,756	-		LRK54_RS08935	0.44	+0.9
1,946,756	-		LRK54_RS08935	0.44	+0.5
1,946,756	-		LRK54_RS08935	0.44	-0.8
1,946,756	-		LRK54_RS08935	0.44	-0.3
1,946,756	-		LRK54_RS08935	0.44	-1.9
1,946,756	-		LRK54_RS08935	0.44	-0.3
1,946,756	-		LRK54_RS08935	0.44	+0.1
1,946,756	-		LRK54_RS08935	0.44	+0.3
1,946,756	-		LRK54_RS08935	0.44	-0.3
1,946,826	+		LRK54_RS08935	0.58	-1.2
1,946,826	+		LRK54_RS08935	0.58	+1.3
1,946,826	+		LRK54_RS08935	0.58	-1.5
1,946,839	+		LRK54_RS08935	0.61	-0.8
1,946,839	+		LRK54_RS08935	0.61	+0.9
1,946,839	+		LRK54_RS08935	0.61	+0.2
1,946,840	-		LRK54_RS08935	0.61	-0.5
1,946,840	-		LRK54_RS08935	0.61	+0.8
1,946,840	-		LRK54_RS08935	0.61	+0.7
1,946,840	-		LRK54_RS08935	0.61	-2.2
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